RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W TY2A-DR3Q99303 438 aa2.35□□□□□ -2.03
RTT102YGR275W CHC1P22137 1653 aaKnown RBP2.34□□□□□ -2.03
RTT102YGR275W RAD16P31244 790 aa2.34□□□□□ -2.03
RTT102YGR275W LOS1P33418 1100 aaPredicted RBP2.34□□□□□ -2.03
RTT102YGR275W RRP3P38712 501 aaKnown RBP2.34□□□□□ -2.03
RTT102YGR275W ACA1P39970 489 aa2.34□□□□□ -2.03
RTT102YGR275W RGI2P40188 164 aa2.34□□□□□ -2.03
RTT102YGR275W IST3P40565 148 aaPredicted RBP2.34□□□□□ -2.03
RTT102YGR275W MAK10Q02197 733 aa2.34□□□□□ -2.03
RTT102YGR275W CSR1Q06705 408 aaKnown RBP2.34□□□□□ -2.03
RTT102YGR275W SSN2P38931 1420 aa2.34□□□□□ -2.04
RTT102YGR275W TSC11P40061 1430 aa2.34□□□□□ -2.04
RTT102YGR275W SNT2P53127 1403 aa2.34□□□□□ -2.04
RTT102YGR275W HXK2P04807 486 aaKnown RBP2.33□□□□□ -2.04
RTT102YGR275W MSM1P22438 575 aa2.33□□□□□ -2.04
RTT102YGR275W YCL049CP25577 312 aa2.33□□□□□ -2.04
RTT102YGR275W GAC1P28006 793 aa2.33□□□□□ -2.04
RTT102YGR275W YBP1P38315 674 aa2.33□□□□□ -2.04
RTT102YGR275W PRE5P40302 234 aaKnown RBP2.33□□□□□ -2.04
RTT102YGR275W PFK26P40433 827 aaKnown RBP2.33□□□□□ -2.04
RTT102YGR275W YIL060WP40519 144 aa2.33□□□□□ -2.04
RTT102YGR275W SMC3P47037 1230 aa2.33□□□□□ -2.04
RTT102YGR275W BLS1Q06071 122 aa2.33□□□□□ -2.04
RTT102YGR275W YOL159CQ08300 171 aa2.33□□□□□ -2.04
RTT102YGR275W MLP2P40457 1679 aa2.33□□□□□ -2.04
RTT102YGR275W GDB1Q06625 1536 aa2.32□□□□□ -2.04
RTT102YGR275W PFK2P16862 959 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
RTT102YGR275W MIA40P36046 403 aa2.32□□□□□ -2.04
RTT102YGR275W PHO90P39535 881 aa2.32□□□□□ -2.04
RTT102YGR275W GUF1P46943 645 aa2.32□□□□□ -2.04
RTT102YGR275W IKS1P47042 667 aa2.32□□□□□ -2.04
RTT102YGR275W NUP100Q02629 959 aa2.32□□□□□ -2.04
RTT102YGR275W APL4Q12028 832 aa2.32□□□□□ -2.04
RTT102YGR275W NUS1Q12063 375 aa2.32□□□□□ -2.04
RTT102YGR275W PCD1Q12524 340 aa2.32□□□□□ -2.04
RTT102YGR275W IQG1Q12280 1495 aa2.32□□□□□ -2.04
RTT102YGR275W RPL15AP05748 204 aaKnown RBP2.31□□□□□ -2.04
RTT102YGR275W SPE2P21182 396 aa2.31□□□□□ -2.04
RTT102YGR275W UBC1P21734 215 aaKnown RBP2.31□□□□□ -2.04
RTT102YGR275W PKP1P40530 394 aa2.31□□□□□ -2.04
RTT102YGR275W SMK1P41808 388 aa2.31□□□□□ -2.04
RTT102YGR275W DPB11P47027 764 aaPredicted RBP2.31□□□□□ -2.04
RTT102YGR275W CTF18P49956 741 aa2.31□□□□□ -2.04
RTT102YGR275W ARC35P53731 342 aaKnown RBP2.31□□□□□ -2.04
RTT102YGR275W TDA7P53882 636 aaPredicted RBP2.31□□□□□ -2.04
RTT102YGR275W ATG26Q06321 1198 aa2.31□□□□□ -2.04
RTT102YGR275W RDR1Q08904 546 aa2.31□□□□□ -2.04
RTT102YGR275W SET6Q12529 373 aa2.31□□□□□ -2.04
RTT102YGR275W SMC4Q12267 1418 aa2.31□□□□□ -2.04
RTT102YGR275W MYO4P32492 1471 aa2.31□□□□□ -2.04
RTT102YGR275W BUD3P25558 1636 aa2.31□□□□□ -2.04
RTT102YGR275W MTF2P10849 440 aa2.3□□□□□ -2.04
RTT102YGR275W MCK1P21965 375 aaKnown RBP2.3□□□□□ -2.04
RTT102YGR275W ERG8P24521 451 aa2.3□□□□□ -2.04
RTT102YGR275W LCB1P25045 558 aaKnown RBP2.3□□□□□ -2.04
RTT102YGR275W ATS1P31386 333 aa2.3□□□□□ -2.04
RTT102YGR275W XRS2P33301 854 aa2.3□□□□□ -2.04
RTT102YGR275W YKL050CP35736 922 aa2.3□□□□□ -2.04
RTT102YGR275W IFA38P38286 347 aa2.3□□□□□ -2.04
RTT102YGR275W PTH1P38876 190 aaKnown RBP2.3□□□□□ -2.04
RTT102YGR275W UME6P39001 836 aa2.3□□□□□ -2.04
RTT102YGR275W RPH1P39956 796 aa2.3□□□□□ -2.04
RTT102YGR275W CIA1Q05583 330 aa2.3□□□□□ -2.04
RTT102YGR275W YEH2Q07950 538 aa2.3□□□□□ -2.04
RTT102YGR275W YOR019WQ99248 730 aa2.3□□□□□ -2.04
RTT102YGR275W YOR1P53049 1477 aa2.3□□□□□ -2.04
RTT102YGR275W SNQ2P32568 1501 aaKnown RBP2.3□□□□□ -2.04
RTT102YGR275W PDR12Q02785 1511 aa2.3□□□□□ -2.04
RTT102YGR275W YLR302CO13544 120 aa2.29□□□□□ -2.04
RTT102YGR275W YBR085C-AO43137 85 aa2.29□□□□□ -2.04
RTT102YGR275W MCM4P30665 933 aaKnown RBP2.29□□□□□ -2.04
RTT102YGR275W YEL045CP32616 141 aa2.29□□□□□ -2.04
RTT102YGR275W TEF4P36008 412 aaKnown RBP2.29□□□□□ -2.04
RTT102YGR275W PHD1P36093 366 aa2.29□□□□□ -2.04
RTT102YGR275W IME4P41833 600 aa2.29□□□□□ -2.04
RTT102YGR275W YFR016CP43597 1233 aaKnown RBP2.29□□□□□ -2.04
RTT102YGR275W YGL082WP53155 381 aa2.29□□□□□ -2.04
RTT102YGR275W PKP2P53170 491 aa2.29□□□□□ -2.04
RTT102YGR275W SOL4P53315 255 aa2.29□□□□□ -2.04
RTT102YGR275W UBX4P54730 416 aa2.29□□□□□ -2.04
RTT102YGR275W REG1Q00816 1014 aa2.29□□□□□ -2.04
RTT102YGR275W FMP45Q07651 309 aa2.29□□□□□ -2.04
RTT102YGR275W YOL057WQ08225 711 aa2.29□□□□□ -2.04
RTT102YGR275W ARP6Q12509 438 aa2.29□□□□□ -2.04
RTT102YGR275W VCX1Q99385 411 aa2.29□□□□□ -2.04
RTT102YGR275W TY3B-GQ99315 1547 aa2.28□□□□□ -2.04
RTT102YGR275W POL1P13382 1468 aa2.28□□□□□ -2.04
RTT102YGR275W APA1P16550 321 aaKnown RBP2.28□□□□□ -2.04
RTT102YGR275W CNS1P33313 385 aa2.28□□□□□ -2.04
RTT102YGR275W YNK1P36010 153 aaKnown RBP2.28□□□□□ -2.04
RTT102YGR275W SPC34P36131 295 aa2.28□□□□□ -2.04
RTT102YGR275W YER130CP39959 443 aa2.28□□□□□ -2.04
RTT102YGR275W RIC1P40395 1056 aa2.28□□□□□ -2.04
RTT102YGR275W AXL1P40851 1208 aa2.28□□□□□ -2.04
RTT102YGR275W VPS4P52917 437 aa2.28□□□□□ -2.04
RTT102YGR275W STR3P53101 465 aaKnown RBP2.28□□□□□ -2.04
RTT102YGR275W MSS11Q03825 758 aa2.28□□□□□ -2.04
RTT102YGR275W HCR1Q05775 265 aaKnown RBP2.28□□□□□ -2.04
RTT102YGR275W ATG9Q12142 997 aa2.28□□□□□ -2.04
RTT102YGR275W INP53Q12271 1107 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms