RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W SEC39Q12745 709 aa6.64□□□□□ -1.35
SNU71YGR013W LPD1P09624 499 aaKnown RBP6.64□□□□□ -1.35
SNU71YGR013W CAD1P24813 409 aaKnown RBP6.64□□□□□ -1.35
SNU71YGR013W NIP1P32497 812 aaKnown RBP6.64□□□□□ -1.35
SNU71YGR013W CDC5P32562 705 aa6.64□□□□□ -1.35
SNU71YGR013W ELF1P36053 145 aa6.64□□□□□ -1.35
SNU71YGR013W PLB1P39105 664 aa6.64□□□□□ -1.35
SNU71YGR013W BUR6P40096 142 aa6.64□□□□□ -1.35
SNU71YGR013W MNP1P53163 194 aaPredicted RBP6.64□□□□□ -1.35
SNU71YGR013W YGR130CP53278 816 aa6.64□□□□□ -1.35
SNU71YGR013W NOP6Q07623 225 aaKnown RBP6.64□□□□□ -1.35
SNU71YGR013W CFT2Q12102 859 aaPredicted RBP6.64□□□□□ -1.35
SNU71YGR013W LEU9Q12166 604 aaKnown RBP6.64□□□□□ -1.35
SNU71YGR013W HER1Q12276 1246 aa6.64□□□□□ -1.35
SNU71YGR013W YMR084WA2P2R3 262 aa6.63□□□□□ -1.35
SNU71YGR013W MRP13P12686 339 aa6.63□□□□□ -1.35
SNU71YGR013W OM45P16547 393 aa6.63□□□□□ -1.35
SNU71YGR013W KGD1P20967 1014 aaKnown RBP6.63□□□□□ -1.35
SNU71YGR013W PRD1P25375 712 aa6.63□□□□□ -1.35
SNU71YGR013W CTP1P38152 299 aa6.63□□□□□ -1.35
SNU71YGR013W YBR053CP38235 358 aa6.63□□□□□ -1.35
SNU71YGR013W MEF2P39677 819 aa6.63□□□□□ -1.35
SNU71YGR013W STU2P46675 888 aa6.63□□□□□ -1.35
SNU71YGR013W AMA1P50082 593 aa6.63□□□□□ -1.35
SNU71YGR013W MLC1P53141 149 aa6.63□□□□□ -1.35
SNU71YGR013W IPI3P53877 555 aa6.63□□□□□ -1.35
SNU71YGR013W RHO5P53879 331 aaKnown RBP6.63□□□□□ -1.35
SNU71YGR013W MF(ALPHA)1P01149 165 aa6.62□□□□□ -1.35
SNU71YGR013W APN1P22936 367 aa6.62□□□□□ -1.35
SNU71YGR013W HCS1P34243 683 aa6.62□□□□□ -1.35
SNU71YGR013W NTR2P36118 322 aaPredicted RBP6.62□□□□□ -1.35
SNU71YGR013W LNP1P38878 278 aa6.62□□□□□ -1.35
SNU71YGR013W SEC31P38968 1273 aaKnown RBP6.62□□□□□ -1.35
SNU71YGR013W FUN12P39730 1002 aaKnown RBP6.62□□□□□ -1.35
SNU71YGR013W SER3P40054 469 aa6.62□□□□□ -1.35
SNU71YGR013W ALG5P40350 334 aa6.62□□□□□ -1.35
SNU71YGR013W SMC3P47037 1230 aa6.62□□□□□ -1.35
SNU71YGR013W MUP1P50276 574 aa6.62□□□□□ -1.35
SNU71YGR013W PAN2P53010 1115 aaPredicted RBP6.62□□□□□ -1.35
SNU71YGR013W YLH47Q06493 454 aa6.62□□□□□ -1.35
SNU71YGR013W SWA2Q06677 668 aa6.62□□□□□ -1.35
SNU71YGR013W RXT3Q07458 294 aa6.62□□□□□ -1.35
SNU71YGR013W YML133CQ03099 1374 aa6.62□□□□□ -1.35
SNU71YGR013W YLL067CQ07888 1374 aa6.62□□□□□ -1.35
SNU71YGR013W YLL066CQ99208 1374 aa6.62□□□□□ -1.35
SNU71YGR013W COX1P00401 534 aa6.62□□□□□ -1.35
SNU71YGR013W DAL80P26343 269 aa6.62□□□□□ -1.35
SNU71YGR013W SSE2P32590 693 aaKnown RBP6.62□□□□□ -1.35
SNU71YGR013W RIX1P38883 763 aaPredicted RBP6.62□□□□□ -1.35
SNU71YGR013W NPA3P47122 385 aa6.62□□□□□ -1.35
SNU71YGR013W YGR035CP53222 116 aa6.62□□□□□ -1.35
SNU71YGR013W RPS15Q01855 142 aaKnown RBP6.62□□□□□ -1.35
SNU71YGR013W RSM28Q03430 361 aa6.62□□□□□ -1.35
SNU71YGR013W FIN1Q03898 291 aa6.62□□□□□ -1.35
SNU71YGR013W THI72Q08579 599 aa6.62□□□□□ -1.35
SNU71YGR013W AI5_ALPHAQ9ZZX1 630 aa6.62□□□□□ -1.35
SNU71YGR013W CFT1Q06632 1357 aaKnown RBP6.61□□□□□ -1.35
SNU71YGR013W HIP1P06775 603 aa6.61□□□□□ -1.35
SNU71YGR013W RNA1P11745 407 aaKnown RBP6.61□□□□□ -1.35
SNU71YGR013W SRP54P20424 541 aaKnown RBP6.61□□□□□ -1.35
SNU71YGR013W DBP3P20447 523 aaKnown RBP6.61□□□□□ -1.35
SNU71YGR013W RRP43P25359 394 aaPredicted RBP6.61□□□□□ -1.35
SNU71YGR013W SSE1P32589 693 aaKnown RBP6.61□□□□□ -1.35
SNU71YGR013W WSS1P38838 269 aa6.61□□□□□ -1.35
SNU71YGR013W CHS6P40955 746 aa6.61□□□□□ -1.35
SNU71YGR013W MSY1P48527 492 aa6.61□□□□□ -1.35
SNU71YGR013W UBC11P52492 156 aa6.61□□□□□ -1.35
SNU71YGR013W RAD33Q04231 177 aa6.61□□□□□ -1.35
SNU71YGR013W YOR352WQ08816 343 aa6.61□□□□□ -1.35
SNU71YGR013W VPS54Q12071 889 aa6.61□□□□□ -1.35
SNU71YGR013W BAG7Q12128 409 aa6.61□□□□□ -1.35
SNU71YGR013W IDH2P28241 369 aaKnown RBP6.6□□□□□ -1.35
SNU71YGR013W NIP100P33420 868 aa6.6□□□□□ -1.35
SNU71YGR013W APT1P49435 187 aaKnown RBP6.6□□□□□ -1.35
SNU71YGR013W FMS1P50264 508 aa6.6□□□□□ -1.35
SNU71YGR013W CUE3P53137 624 aaKnown RBP6.6□□□□□ -1.35
SNU71YGR013W SNO2P53823 222 aa6.6□□□□□ -1.35
SNU71YGR013W ACK1Q07622 623 aaPredicted RBP6.6□□□□□ -1.35
SNU71YGR013W MLH3Q12083 715 aa6.6□□□□□ -1.35
SNU71YGR013W LAS17Q12446 633 aa6.6□□□□□ -1.35
SNU71YGR013W CYC7P00045 113 aa6.6□□□□□ -1.35
SNU71YGR013W AMD2P22580 549 aa6.6□□□□□ -1.35
SNU71YGR013W PPH22P23595 377 aa6.6□□□□□ -1.35
SNU71YGR013W SPC110P32380 944 aa6.6□□□□□ -1.35
SNU71YGR013W PHO11P35842 467 aa6.6□□□□□ -1.35
SNU71YGR013W TUL1P36096 758 aa6.6□□□□□ -1.35
SNU71YGR013W PHO12P38693 467 aa6.6□□□□□ -1.35
SNU71YGR013W YHR131CP38835 850 aa6.6□□□□□ -1.35
SNU71YGR013W ELO3P40319 345 aa6.6□□□□□ -1.35
SNU71YGR013W EFM6P53970 246 aa6.6□□□□□ -1.35
SNU71YGR013W PPM1Q04081 328 aa6.6□□□□□ -1.35
SNU71YGR013W RBA50Q04418 439 aa6.6□□□□□ -1.35
SNU71YGR013W RNH1Q04740 348 aa6.6□□□□□ -1.35
SNU71YGR013W YLR224WQ05947 369 aa6.6□□□□□ -1.35
SNU71YGR013W SGT2Q12118 346 aaKnown RBP6.6□□□□□ -1.35
SNU71YGR013W RPL6BP05739 176 aaKnown RBP6.59□□□□□ -1.35
SNU71YGR013W KGD2P19262 463 aaPredicted RBP6.59□□□□□ -1.35
SNU71YGR013W FUB1P25659 250 aa6.59□□□□□ -1.35
SNU71YGR013W CDC20P26309 610 aa6.59□□□□□ -1.35
SNU71YGR013W CNE1P27825 502 aa6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms