RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	LAC1	P28496	418 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	DEP1	P31385	405 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	MSS51	P32335	436 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	GND1	P38720	489 aa	Known RBP	4.14	□□□□□ -1.75
FDH1	YOR388C	CAB2	P40506	365 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	CDC1	P40986	491 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	PEX8	P53248	589 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	TEP1	P53916	434 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	BOP3	P53958	396 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	YMR102C	Q03177	834 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	ECM22	Q05958	814 aa	Predicted RBP	4.14	□□□□□ -1.75
FDH1	YOR388C	TMA7	Q3E764	64 aa	Known RBP	4.14	□□□□□ -1.75
FDH1	YOR388C	MPD2	Q99316	277 aa		4.14	□□□□□ -1.75
FDH1	YOR388C	SST2	P11972	698 aa	Known RBP	4.13	□□□□□ -1.75
FDH1	YOR388C	COQ1	P18900	473 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	SWE1	P32944	819 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	PRX1	P34227	261 aa	Known RBP	4.13	□□□□□ -1.75
FDH1	YOR388C	TPA1	P40032	644 aa	Known RBP	4.13	□□□□□ -1.75
FDH1	YOR388C	YIR016W	P40572	265 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	YPR003C	P53394	754 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	GTB1	Q04924	702 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	EIS1	Q05050	843 aa	Known RBP	4.13	□□□□□ -1.75
FDH1	YOR388C	COG4	Q06096	861 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	BRE1	Q07457	700 aa	Known RBP	4.13	□□□□□ -1.75
FDH1	YOR388C	SNA4	Q07549	140 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	BUD7	Q08754	746 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
FDH1	YOR388C	MYO1	P08964	1928 aa		4.13	□□□□□ -1.75
FDH1	YOR388C	OCT1	P35999	772 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	SCO2	P38072	301 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	CST26	P38226	397 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	RTT107	P38850	1070 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	VPS41	P38959	992 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	VID27	P40157	782 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	LYS14	P40971	790 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	ATG21	Q02887	496 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	MRD1	Q06106	887 aa	Known RBP	4.12	□□□□□ -1.75
FDH1	YOR388C	PDR8	Q06149	701 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	TLG2	Q08144	397 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	RIM20	Q12033	661 aa		4.12	□□□□□ -1.75
FDH1	YOR388C	CFT2	Q12102	859 aa	Predicted RBP	4.12	□□□□□ -1.75
FDH1	YOR388C	FKS1	P38631	1876 aa	Known RBP	4.11	□□□□□ -1.75
FDH1	YOR388C	RPL19A	P0CX82	189 aa	Known RBP	4.11	□□□□□ -1.75
FDH1	YOR388C	RPL19B	P0CX83	189 aa	Predicted RBP	4.11	□□□□□ -1.75
FDH1	YOR388C	PRE8	P23639	250 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	MCM3	P24279	971 aa	Known RBP	4.11	□□□□□ -1.75
FDH1	YOR388C	URK1	P27515	501 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	BYE1	P36106	594 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	AAP1	P37898	856 aa	Known RBP	4.11	□□□□□ -1.75
FDH1	YOR388C	ERG7	P38604	731 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	RTS1	P38903	757 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	BUD16	P39988	312 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	YIL152W	P40455	235 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	UBX6	P47049	396 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	YPT11	P48559	417 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	CTF18	P49956	741 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	YGR079W	P53249	370 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	IWR1	Q07532	353 aa	Predicted RBP	4.11	□□□□□ -1.75
FDH1	YOR388C	TAH18	Q12181	623 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	YKL068W-A	Q3E826	78 aa		4.11	□□□□□ -1.75
FDH1	YOR388C	PET111	P08468	800 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	POL3	P15436	1097 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	SAM2	P19358	384 aa	Known RBP	4.1	□□□□□ -1.75
FDH1	YOR388C	PHM8	P40025	321 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	MSY1	P48527	492 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	YNL144C	P53907	740 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	GYL1	Q04322	720 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	PIG1	Q06216	648 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	SUL2	Q12325	893 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	PGA3	Q12746	312 aa	Known RBP	4.1	□□□□□ -1.75
FDH1	YOR388C	RIF1	P29539	1916 aa		4.1	□□□□□ -1.75
FDH1	YOR388C	GPA1	P08539	472 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	RIT1	P23796	513 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	CDC60	P26637	1090 aa	Known RBP	4.09	□□□□□ -1.75
FDH1	YOR388C	CHS3	P29465	1165 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	PRO3	P32263	286 aa	Known RBP	4.09	□□□□□ -1.75
FDH1	YOR388C	APM3	P38153	483 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	OSH3	P38713	996 aa	Known RBP	4.09	□□□□□ -1.75
FDH1	YOR388C	TIF4631	P39935	952 aa	Known RBP	4.09	□□□□□ -1.75
FDH1	YOR388C	VAB2	P40003	282 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	PSF2	P40359	213 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	QRI7	P43122	407 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	PRP3	Q03338	469 aa	Predicted RBP	4.09	□□□□□ -1.75
FDH1	YOR388C	YDR109C	Q04585	715 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	GSH2	Q08220	491 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	NEW1	Q08972	1196 aa	Known RBP	4.09	□□□□□ -1.75
FDH1	YOR388C	BAG7	Q12128	409 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	DDP1	Q99321	188 aa	Known RBP	4.09	□□□□□ -1.75
FDH1	YOR388C	RAD61	Q99359	647 aa		4.09	□□□□□ -1.75
FDH1	YOR388C	ADE3	P07245	946 aa	Known RBP	4.08	□□□□□ -1.76
FDH1	YOR388C	MIS1	P09440	975 aa	Known RBP	4.08	□□□□□ -1.76
FDH1	YOR388C	PET122	P10355	254 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	VMA2	P16140	517 aa	Known RBP	4.08	□□□□□ -1.76
FDH1	YOR388C	SRP54	P20424	541 aa	Known RBP	4.08	□□□□□ -1.76
FDH1	YOR388C	OPI1	P21957	404 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	RDS1	P25611	832 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	IMP2'	P32351	346 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	FLO1	P32768	1537 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	GCS1	P35197	352 aa		4.08	□□□□□ -1.76
FDH1	YOR388C	GDT1	P38301	280 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms