RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B SPC110P32380 944 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B MTH1P35198 433 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B UBP13P38187 747 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B SMF1P38925 575 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B PCF11P39081 626 aaPredicted RBP1.93□□□□□ -2.1
YOR343W-BYOR343W-B EXO1P39875 702 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B YJL132WP47014 750 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B YJR011CP47086 261 aaPredicted RBP1.93□□□□□ -2.1
YOR343W-BYOR343W-B IBD2P53892 351 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B MDM1Q01846 1127 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B PLM2Q04383 521 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B NUR1Q12066 484 aa1.93□□□□□ -2.1
YOR343W-BYOR343W-B SAN1P22470 610 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B REC114P32841 428 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B SLC1P33333 303 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YKL023WP36103 277 aaKnown RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B AXL2P38928 823 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B EAF5P39995 279 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B ALG5P40350 334 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B AVT1P47082 602 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B NRD1P53617 575 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
YOR343W-BYOR343W-B NUP53Q03790 475 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B ARP9Q05123 467 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B ATG29Q12092 213 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B RRG1Q12167 365 aaPredicted RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
YOR343W-BYOR343W-B UBX3Q12229 455 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YPT6Q99260 215 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B CYB2P00175 591 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B HIS4P00815 799 aaKnown RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B HEM1P09950 548 aaPredicted RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B RIT1P23796 513 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B BRF1P29056 596 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B NDI1P32340 513 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B UTR4P32626 227 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B SOF1P33750 489 aaKnown RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B PXA2P34230 853 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YHR122WP38829 231 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B VPS45P38932 577 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B SWP82P43554 623 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B VPS74Q06385 345 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YFH1Q07540 174 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B SKI7Q08491 747 aaPredicted RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B SUT2Q12286 268 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B SPE4Q12455 300 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B SEC63P14906 663 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B AMD1P15274 810 aaKnown RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B SPS22P25380 463 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B VPH2P32341 215 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B MVD1P32377 396 aaKnown RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B LOS1P33418 1100 aaPredicted RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B YBL055CP34220 418 aaPredicted RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B SHP1P34223 423 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B RIX1P38883 763 aaPredicted RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B ARB1P40024 610 aaKnown RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B MNT3P40549 630 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B RTS2P40962 232 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B IME4P41833 600 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YNL144CP53907 740 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B MSC1Q03104 513 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B CRF1Q04930 467 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B APL4Q12028 832 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B ARG81P05085 880 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YFL068WP0CX99 160 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YLL066W-AP0CY00 160 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YLL067W-AP0CY01 160 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B HNM1P19807 563 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YBR144CP34215 104 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B HOT13P36078 116 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B MIC60P36112 540 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YIL152WP40455 235 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B REE1P40893 198 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YFL015CP43578 164 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YJR008WP47085 338 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B ARE2P53629 642 aaKnown RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B YSA1Q01976 231 aa1.92□□□□□ -2.1
YOR343W-BYOR343W-B YVH1Q02256 364 aaKnown RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B BUD21Q08492 214 aaPredicted RBP1.92□□□□□ -2.1
YOR343W-BYOR343W-B RRP1P35178 278 aaPredicted RBP1.91□□□□□ -2.1
YOR343W-BYOR343W-B DUG2P38149 878 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B YBP1P38315 674 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B CDC40P40968 455 aaPredicted RBP1.91□□□□□ -2.1
YOR343W-BYOR343W-B YLR287CQ05881 355 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B YEH2Q07950 538 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B Q0142Q9ZZW4 58 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B TPK1P06244 397 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B ILV2P07342 687 aaKnown RBP1.91□□□□□ -2.1
YOR343W-BYOR343W-B PMR1P13586 950 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B YHR033WP38690 423 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B ELO1P39540 310 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B ERP2P39704 215 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B DPH1P40487 425 aaKnown RBP1.91□□□□□ -2.1
YOR343W-BYOR343W-B CIN1P40987 1014 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B PSA1P41940 361 aaKnown RBP1.91□□□□□ -2.1
YOR343W-BYOR343W-B FYV8P46949 817 aaKnown RBP1.91□□□□□ -2.1
YOR343W-BYOR343W-B GLO1P50107 326 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B RRT6P53117 311 aaPredicted RBP1.91□□□□□ -2.1
YOR343W-BYOR343W-B MLC1P53141 149 aa1.91□□□□□ -2.1
YOR343W-BYOR343W-B SNU56Q03782 492 aaKnown RBP1.91□□□□□ -2.1
YOR343W-BYOR343W-B RRN11Q04712 507 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms