RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeastyeast

Gene VMA22, Length 546 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA22YHR060W YDL086WQ07505 273 aa4.46□□□□□ -1.7
VMA22YHR060W GPN2Q08726 347 aaPredicted RBP4.46□□□□□ -1.7
VMA22YHR060W SIR3P06701 978 aa4.45□□□□□ -1.7
VMA22YHR060W SPE2P21182 396 aa4.45□□□□□ -1.7
VMA22YHR060W ERV1P27882 189 aa4.45□□□□□ -1.7
VMA22YHR060W HRR25P29295 494 aaKnown RBP4.45□□□□□ -1.7
VMA22YHR060W SSE1P32589 693 aaKnown RBP4.45□□□□□ -1.7
VMA22YHR060W SSE2P32590 693 aaKnown RBP4.45□□□□□ -1.7
VMA22YHR060W YEL043WP32618 956 aa4.45□□□□□ -1.7
VMA22YHR060W WBP1P33767 430 aaKnown RBP4.45□□□□□ -1.7
VMA22YHR060W HEL1P36113 551 aa4.45□□□□□ -1.7
VMA22YHR060W NTR2P36118 322 aaPredicted RBP4.45□□□□□ -1.7
VMA22YHR060W NTC20P38302 140 aaPredicted RBP4.45□□□□□ -1.7
VMA22YHR060W LYS4P49367 693 aaPredicted RBP4.45□□□□□ -1.7
VMA22YHR060W FHN1P53279 174 aa4.45□□□□□ -1.7
VMA22YHR060W AAT1Q01802 451 aa4.45□□□□□ -1.7
VMA22YHR060W ARX1Q03862 593 aaKnown RBP4.45□□□□□ -1.7
VMA22YHR060W UFO1Q04511 668 aa4.45□□□□□ -1.7
VMA22YHR060W YLR456WQ06199 204 aa4.45□□□□□ -1.7
VMA22YHR060W KEL3Q08979 651 aaPredicted RBP4.45□□□□□ -1.7
VMA22YHR060W YPL272CQ08984 517 aa4.45□□□□□ -1.7
VMA22YHR060W MED2Q12124 431 aa4.45□□□□□ -1.7
VMA22YHR060W AAC1P04710 309 aa4.44□□□□□ -1.7
VMA22YHR060W RPL3P14126 387 aaKnown RBP4.44□□□□□ -1.7
VMA22YHR060W SRV2P17555 526 aaKnown RBP4.44□□□□□ -1.7
VMA22YHR060W PRD1P25375 712 aa4.44□□□□□ -1.7
VMA22YHR060W DAL80P26343 269 aa4.44□□□□□ -1.7
VMA22YHR060W BUD14P27637 709 aa4.44□□□□□ -1.7
VMA22YHR060W YME2P32843 850 aa4.44□□□□□ -1.7
VMA22YHR060W PHO11P35842 467 aa4.44□□□□□ -1.7
VMA22YHR060W HES1P35843 434 aa4.44□□□□□ -1.7
VMA22YHR060W ELF1P36053 145 aa4.44□□□□□ -1.7
VMA22YHR060W YBR053CP38235 358 aa4.44□□□□□ -1.7
VMA22YHR060W RRT2P38332 387 aa4.44□□□□□ -1.7
VMA22YHR060W PHO12P38693 467 aa4.44□□□□□ -1.7
VMA22YHR060W PIH1P38768 344 aa4.44□□□□□ -1.7
VMA22YHR060W ARO9P38840 513 aaPredicted RBP4.44□□□□□ -1.7
VMA22YHR060W MTG2P38860 518 aa4.44□□□□□ -1.7
VMA22YHR060W FMP52P40008 231 aa4.44□□□□□ -1.7
VMA22YHR060W PHM8P40025 321 aa4.44□□□□□ -1.7
VMA22YHR060W RTT105P40063 208 aa4.44□□□□□ -1.7
VMA22YHR060W ASG1P40467 964 aa4.44□□□□□ -1.7
VMA22YHR060W SGN1P40561 250 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
VMA22YHR060W MAF1P41910 395 aa4.44□□□□□ -1.7
VMA22YHR060W DPB11P47027 764 aaPredicted RBP4.44□□□□□ -1.7
VMA22YHR060W MDE1P47095 244 aa4.44□□□□□ -1.7
VMA22YHR060W RPS7BP48164 190 aaKnown RBP4.44□□□□□ -1.7
VMA22YHR060W BUD17P53727 317 aa4.44□□□□□ -1.7
VMA22YHR060W YDR109CQ04585 715 aa4.44□□□□□ -1.7
VMA22YHR060W GFD1Q04839 188 aaKnown RBP4.44□□□□□ -1.7
VMA22YHR060W ETT1Q08421 412 aaKnown RBP4.44□□□□□ -1.7
VMA22YHR060W PUS9Q12069 462 aa4.44□□□□□ -1.7
VMA22YHR060W LAS17Q12446 633 aa4.44□□□□□ -1.7
VMA22YHR060W CNE1P27825 502 aa4.43□□□□□ -1.7
VMA22YHR060W LAC1P28496 418 aa4.43□□□□□ -1.7
VMA22YHR060W GSH1P32477 678 aa4.43□□□□□ -1.7
VMA22YHR060W YME1P32795 747 aa4.43□□□□□ -1.7
VMA22YHR060W YBR144CP34215 104 aa4.43□□□□□ -1.7
VMA22YHR060W SIF2P38262 535 aa4.43□□□□□ -1.7
VMA22YHR060W YHR097CP38809 366 aaKnown RBP4.43□□□□□ -1.7
VMA22YHR060W SMC3P47037 1230 aa4.43□□□□□ -1.7
VMA22YHR060W MSY1P48527 492 aa4.43□□□□□ -1.7
VMA22YHR060W IMD4P50094 524 aaKnown RBP4.43□□□□□ -1.7
VMA22YHR060W FMS1P50264 508 aa4.43□□□□□ -1.7
VMA22YHR060W YGL138CP53122 345 aa4.43□□□□□ -1.7
VMA22YHR060W MLC1P53141 149 aa4.43□□□□□ -1.7
VMA22YHR060W YGR151CP53287 111 aa4.43□□□□□ -1.7
VMA22YHR060W SNF12P53628 566 aa4.43□□□□□ -1.7
VMA22YHR060W ARP5P53946 755 aa4.43□□□□□ -1.7
VMA22YHR060W EFM6P53970 246 aa4.43□□□□□ -1.7
VMA22YHR060W RRP45Q05636 305 aaKnown RBP4.43□□□□□ -1.7
VMA22YHR060W MMR1Q06324 491 aa4.43□□□□□ -1.7
VMA22YHR060W BMS1Q08965 1183 aaKnown RBP4.43□□□□□ -1.7
VMA22YHR060W VPS54Q12071 889 aa4.43□□□□□ -1.7
VMA22YHR060W LEU9Q12166 604 aaKnown RBP4.43□□□□□ -1.7
VMA22YHR060W RLM1Q12224 676 aa4.43□□□□□ -1.7
VMA22YHR060W HER1Q12276 1246 aa4.43□□□□□ -1.7
VMA22YHR060W ISN1Q99312 450 aa4.43□□□□□ -1.7
VMA22YHR060W YLR278CQ05854 1341 aa4.43□□□□□ -1.7
VMA22YHR060W COX1P00401 534 aa4.42□□□□□ -1.7
VMA22YHR060W CHO2P05374 869 aaKnown RBP4.42□□□□□ -1.7
VMA22YHR060W RPL1AP0CX43 217 aaKnown RBP4.42□□□□□ -1.7
VMA22YHR060W RPL1BP0CX44 217 aaKnown RBP4.42□□□□□ -1.7
VMA22YHR060W YPK1P12688 680 aaKnown RBP4.42□□□□□ -1.7
VMA22YHR060W ERG4P25340 473 aa4.42□□□□□ -1.7
VMA22YHR060W GND1P38720 489 aaKnown RBP4.42□□□□□ -1.7
VMA22YHR060W YHR218WP38899 603 aa4.42□□□□□ -1.7
VMA22YHR060W HRB1P38922 454 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
VMA22YHR060W SWP82P43554 623 aa4.42□□□□□ -1.7
VMA22YHR060W YJL163CP46996 555 aa4.42□□□□□ -1.7
VMA22YHR060W YIP4P53093 235 aa4.42□□□□□ -1.7
VMA22YHR060W DIP5P53388 608 aa4.42□□□□□ -1.7
VMA22YHR060W IPI3P53877 555 aa4.42□□□□□ -1.7
VMA22YHR060W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
VMA22YHR060W SKO1Q02100 647 aa4.42□□□□□ -1.7
VMA22YHR060W HEL2Q05580 639 aaKnown RBP4.42□□□□□ -1.7
VMA22YHR060W YDL242WQ07746 117 aa4.42□□□□□ -1.7
VMA22YHR060W IRC13Q08630 104 aa4.42□□□□□ -1.7
VMA22YHR060W RTC5Q12108 567 aaKnown RBP4.42□□□□□ -1.7
VMA22YHR060W RKI1Q12189 258 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms