RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W OSH6Q02201 448 aa11.23□□□□□ -0.61
SNF6YHL025W RMI1Q02685 241 aa11.23□□□□□ -0.61
SNF6YHL025W VTA1Q06263 330 aa11.23□□□□□ -0.61
SNF6YHL025W ALR1Q08269 859 aa11.23□□□□□ -0.61
SNF6YHL025W BUD7Q08754 746 aa11.23□□□□□ -0.61
SNF6YHL025W MSB2P32334 1306 aa11.23□□□□□ -0.61
SNF6YHL025W SEM1O94742 89 aa11.22□□□□□ -0.61
SNF6YHL025W PDB1P32473 366 aaKnown RBP11.22□□□□□ -0.61
SNF6YHL025W PRP18P33411 251 aaPredicted RBP11.22□□□□□ -0.61
SNF6YHL025W EFM1P38732 585 aa11.22□□□□□ -0.61
SNF6YHL025W PRM2P40534 656 aa11.22□□□□□ -0.61
SNF6YHL025W IRR1P40541 1150 aa11.22□□□□□ -0.61
SNF6YHL025W SET2P46995 733 aaKnown RBP11.22□□□□□ -0.61
SNF6YHL025W CLD1P53264 445 aa11.22□□□□□ -0.61
SNF6YHL025W ARP4P80428 489 aa11.22□□□□□ -0.61
SNF6YHL025W NUM1Q00402 2748 aa11.22□□□□□ -0.61
SNF6YHL025W UBP2Q01476 1272 aa11.22□□□□□ -0.61
SNF6YHL025W HDA3Q06623 655 aa11.22□□□□□ -0.61
SNF6YHL025W YPR084WQ06821 456 aa11.22□□□□□ -0.61
SNF6YHL025W HBT1Q07653 1046 aaKnown RBP11.22□□□□□ -0.61
SNF6YHL025W GTT2Q12390 233 aa11.22□□□□□ -0.61
SNF6YHL025W OXP1P28273 1286 aa11.21□□□□□ -0.61
SNF6YHL025W SKT5P34226 696 aa11.21□□□□□ -0.61
SNF6YHL025W LRG1P35688 1017 aa11.21□□□□□ -0.61
SNF6YHL025W DCW1P36091 449 aa11.21□□□□□ -0.61
SNF6YHL025W SHU2P38957 223 aa11.21□□□□□ -0.61
SNF6YHL025W MEP1P40260 492 aa11.21□□□□□ -0.61
SNF6YHL025W COA1P40452 197 aa11.21□□□□□ -0.61
SNF6YHL025W FRE4P53746 719 aa11.21□□□□□ -0.61
SNF6YHL025W PEX13P80667 386 aa11.21□□□□□ -0.61
SNF6YHL025W NPL3Q01560 414 aaKnown RBP RIP-Chip data11.21□□□□□ -0.61 RIP-Chip
SNF6YHL025W GOT1Q03554 138 aa11.21□□□□□ -0.61
SNF6YHL025W TAF12Q03761 539 aa11.21□□□□□ -0.61
SNF6YHL025W RCO1Q04779 684 aa11.21□□□□□ -0.61
SNF6YHL025W YOR012WQ12351 137 aa11.21□□□□□ -0.61
SNF6YHL025W RRP36Q12481 300 aaPredicted RBP11.21□□□□□ -0.61
SNF6YHL025W UBR1P19812 1950 aa11.21□□□□□ -0.62
SNF6YHL025W CET1O13297 549 aaPredicted RBP11.2□□□□□ -0.62
SNF6YHL025W GAL11P19659 1081 aa11.2□□□□□ -0.62
SNF6YHL025W PMT1P33775 817 aa11.2□□□□□ -0.62
SNF6YHL025W TIP20P33891 701 aa11.2□□□□□ -0.62
SNF6YHL025W THI80P35202 319 aa11.2□□□□□ -0.62
SNF6YHL025W DBP8P38719 431 aa11.2□□□□□ -0.62
SNF6YHL025W FRT2P39734 528 aa11.2□□□□□ -0.62
SNF6YHL025W NUP84P52891 726 aa11.2□□□□□ -0.62
SNF6YHL025W EFM5P53200 248 aaKnown RBP11.2□□□□□ -0.62
SNF6YHL025W IBD2P53892 351 aa11.2□□□□□ -0.62
SNF6YHL025W GTB1Q04924 702 aa11.2□□□□□ -0.62
SNF6YHL025W AHA1Q12449 350 aaKnown RBP11.2□□□□□ -0.62
SNF6YHL025W SIP2P34164 415 aaKnown RBP11.19□□□□□ -0.62
SNF6YHL025W PTH2P34222 208 aa11.19□□□□□ -0.62
SNF6YHL025W YHR045WP38775 560 aa11.19□□□□□ -0.62
SNF6YHL025W MPT5P39016 859 aaKnown RBP RIP-Chip data11.19□□□□□ -0.62not detected
SNF6YHL025W TIM17P39515 158 aa11.19□□□□□ -0.62
SNF6YHL025W SER33P40510 469 aa11.19□□□□□ -0.62
SNF6YHL025W COG7P53195 279 aa11.19□□□□□ -0.62
SNF6YHL025W SWC4P53201 476 aa11.19□□□□□ -0.62
SNF6YHL025W NNF2P53253 936 aa11.19□□□□□ -0.62
SNF6YHL025W CUS2P53830 285 aaPredicted RBP11.19□□□□□ -0.62
SNF6YHL025W LGE1Q02796 332 aaKnown RBP11.19□□□□□ -0.62
SNF6YHL025W YPL109CQ02981 657 aa11.19□□□□□ -0.62
SNF6YHL025W CCE1Q03702 353 aa11.19□□□□□ -0.62
SNF6YHL025W HEL2Q05580 639 aaKnown RBP11.19□□□□□ -0.62
SNF6YHL025W YDL121CQ07541 149 aa11.19□□□□□ -0.62
SNF6YHL025W UPC2Q12151 913 aa11.19□□□□□ -0.62
SNF6YHL025W ATG34Q12292 412 aa11.19□□□□□ -0.62
SNF6YHL025W VAN1P23642 535 aa11.18□□□□□ -0.62
SNF6YHL025W SFP1P32432 683 aa11.18□□□□□ -0.62
SNF6YHL025W SPR1P32603 445 aa11.18□□□□□ -0.62
SNF6YHL025W EAP1P36041 632 aaKnown RBP11.18□□□□□ -0.62
SNF6YHL025W PCL5P38794 229 aa11.18□□□□□ -0.62
SNF6YHL025W UTP9P38882 575 aaKnown RBP11.18□□□□□ -0.62
SNF6YHL025W NMA2P53204 395 aa11.18□□□□□ -0.62
SNF6YHL025W NIS1P53939 407 aa11.18□□□□□ -0.62
SNF6YHL025W VAM6Q07468 1049 aa11.18□□□□□ -0.62
SNF6YHL025W SMF3Q12078 473 aaPredicted RBP11.18□□□□□ -0.62
SNF6YHL025W MCD1Q12158 566 aa11.18□□□□□ -0.62
SNF6YHL025W CAR1P00812 333 aaKnown RBP11.17□□□□□ -0.62
SNF6YHL025W ART10P18634 518 aaKnown RBP11.17□□□□□ -0.62
SNF6YHL025W PRP6P19735 899 aaPredicted RBP11.17□□□□□ -0.62
SNF6YHL025W EPT1P22140 391 aa11.17□□□□□ -0.62
SNF6YHL025W RAD14P28519 371 aa11.17□□□□□ -0.62
SNF6YHL025W MLS1P30952 554 aa11.17□□□□□ -0.62
SNF6YHL025W SSE1P32589 693 aaKnown RBP11.17□□□□□ -0.62
SNF6YHL025W FZO1P38297 855 aa11.17□□□□□ -0.62
SNF6YHL025W RIM11P38615 370 aa11.17□□□□□ -0.62
SNF6YHL025W RLP7P40693 322 aaKnown RBP11.17□□□□□ -0.62
SNF6YHL025W SHY1P53266 389 aa11.17□□□□□ -0.62
SNF6YHL025W GTR2P53290 341 aa11.17□□□□□ -0.62
SNF6YHL025W NOP19P53317 196 aaPredicted RBP11.17□□□□□ -0.62
SNF6YHL025W TDA7P53882 636 aaPredicted RBP11.17□□□□□ -0.62
SNF6YHL025W SSL1Q04673 461 aaPredicted RBP11.17□□□□□ -0.62
SNF6YHL025W JIP5Q06214 492 aaPredicted RBP11.17□□□□□ -0.62
SNF6YHL025W ACC1Q00955 2233 aaKnown RBP11.16□□□□□ -0.62
SNF6YHL025W CPA1P07258 411 aaKnown RBP11.16□□□□□ -0.62
SNF6YHL025W PWP1P21304 576 aaKnown RBP11.16□□□□□ -0.62
SNF6YHL025W GUT1P32190 709 aa11.16□□□□□ -0.62
SNF6YHL025W YKL100CP34248 587 aa11.16□□□□□ -0.62
SNF6YHL025W SPT23P35210 1082 aa11.16□□□□□ -0.62
SNF6YHL025W NUP120P35729 1037 aa11.16□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms