RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	ERV25	P54837	211 aa	Known RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	ENA2	Q01896	1091 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	TRM44	Q02648	567 aa	Known RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	RIF2	Q06208	395 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	BRE4	Q07660	1125 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	SPE3	Q12074	293 aa	Known RBP	4.21	□□□□□ -1.74
PMC1	YGL006W	ENA5	Q12691	1091 aa		4.21	□□□□□ -1.74
PMC1	YGL006W	COX4	P04037	155 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	RPA135	P22138	1203 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	KIN82	P25341	720 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	PRP21	P32524	280 aa	Predicted RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	LRG1	P35688	1017 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	YKL222C	P35995	705 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	TFA2	P36145	328 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	ATG7	P38862	630 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	VHR1	P40522	640 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	COS4	P43542	379 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	YJR154W	P47181	346 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	RCF2	P53721	224 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	YNL146W	P53906	100 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	YNL095C	P53932	642 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	DUS3	Q06053	668 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	VTA1	Q06263	330 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	RBD2	Q12270	262 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	LAG2	Q92325	660 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	MED11	Q99278	115 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	SPS1	P08458	490 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	PUP1	P25043	261 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	COQ8	P27697	501 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	ERG9	P29704	444 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	VMA8	P32610	256 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	FSH1	P38777	243 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	KEL1	P38853	1164 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	YAT2	P40017	923 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	IES5	P40060	125 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	EFM5	P53200	248 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	TWF1	P53250	332 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	ALG11	P53954	548 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	NUP49	Q02199	472 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	RSC3	Q06639	885 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	NGL1	Q08213	363 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	HRK1	Q08732	759 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	ATG31	Q12421	196 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	PFK27	Q12471	397 aa	Predicted RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	SIT4	P20604	311 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	PER1	P25625	357 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	GAC1	P28006	793 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	DUR3	P33413	735 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	BIT2	P38346	545 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	YHL012W	P38709	493 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	PPE1	P38796	400 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	SER2	P42941	309 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	CUL3	P53202	744 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	RMI1	Q02685	241 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	ENT5	Q03769	411 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	RQC1	Q05468	723 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	CDC123	Q05791	360 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	YHC1	Q05900	231 aa	Known RBP	4.2	□□□□□ -1.74
PMC1	YGL006W	FMP25	Q08023	583 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	MDY2	Q12285	212 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	TRM10	Q12400	293 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	FMP16	Q12497	93 aa		4.2	□□□□□ -1.74
PMC1	YGL006W	RPS3	P05750	240 aa	Known RBP	4.19	□□□□□ -1.74
PMC1	YGL006W	GPH1	P06738	902 aa	Known RBP	4.19	□□□□□ -1.74
PMC1	YGL006W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PMC1	YGL006W	AEP1	P32493	518 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	FRE1	P32791	686 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	MSC7	P38694	644 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	EFM1	P38732	585 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	GDH3	P39708	457 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	NPR2	P39923	615 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	ATM1	P40416	690 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	PTR3	P43606	678 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	JAC1	P53193	184 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	SNF12	P53628	566 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	YML037C	Q03703	340 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	ECM38	Q05902	660 aa	Predicted RBP	4.19	□□□□□ -1.74
PMC1	YGL006W	GPI11	Q06636	219 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	VPS36	Q06696	566 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	SYO1	Q07395	620 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	IES4	Q08561	116 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	TFB4	Q12004	338 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	YLR049C	Q12110	428 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	RTR2	Q12378	196 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	AVL9	Q12500	764 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	MHF1	Q3E835	90 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	ATP4	P05626	244 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	TPK3	P05986	398 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	COS2	P0CX12	379 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	COS3	P0CX13	379 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	KIN2	P13186	1147 aa	Known RBP	4.19	□□□□□ -1.74
PMC1	YGL006W	RED1	P14291	827 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	RPB4	P20433	221 aa	Predicted RBP	4.19	□□□□□ -1.74
PMC1	YGL006W	CMK2	P22517	447 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	ATG22	P25568	528 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	BUB2	P26448	306 aa	Predicted RBP	4.19	□□□□□ -1.74
PMC1	YGL006W	ARP2	P32381	391 aa	Known RBP	4.19	□□□□□ -1.74
PMC1	YGL006W	PAH1	P32567	862 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	AIM26	P32858	118 aa		4.19	□□□□□ -1.74
PMC1	YGL006W	JEN1	P36035	616 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms