RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeastyeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMC1YGL006W SGS1P35187 1447 aa6.35□□□□□ -1.39
PMC1YGL006W DRS1P32892 752 aaKnown RBP6.29□□□□□ -1.4
PMC1YGL006W MTC1P47018 478 aaKnown RBP6.2□□□□□ -1.42
PMC1YGL006W SSN2P38931 1420 aa6.18□□□□□ -1.42
PMC1YGL006W SPA2P23201 1466 aaKnown RBP6.12□□□□□ -1.43
PMC1YGL006W NOP2P40991 618 aaKnown RBP6.06□□□□□ -1.44
PMC1YGL006W SAS10Q12136 610 aaPredicted RBP6□□□□□ -1.45
PMC1YGL006W RSE1Q04693 1361 aaKnown RBP5.99□□□□□ -1.45
PMC1YGL006W NSR1P27476 414 aaKnown RBP RIP-Chip data5.96□□□□□ -1.45not detected
PMC1YGL006W RQC2Q12532 1038 aaKnown RBP5.89□□□□□ -1.47
PMC1YGL006W INO80P53115 1489 aa5.89□□□□□ -1.47
PMC1YGL006W BFR2Q06631 534 aaKnown RBP5.86□□□□□ -1.47
PMC1YGL006W TAF2P23255 1407 aa5.84□□□□□ -1.47
PMC1YGL006W SKI3P17883 1432 aaKnown RBP5.82□□□□□ -1.48
PMC1YGL006W TAF7Q05021 590 aa5.79□□□□□ -1.48
PMC1YGL006W LEU3P08638 886 aa5.79□□□□□ -1.48
PMC1YGL006W IFH1P39520 1085 aa5.74□□□□□ -1.49
PMC1YGL006W POL5P39985 1022 aaKnown RBP5.74□□□□□ -1.49
PMC1YGL006W TCB3Q03640 1545 aaKnown RBP5.73□□□□□ -1.49
PMC1YGL006W RTT106P40161 455 aa5.72□□□□□ -1.49
PMC1YGL006W XRN1P22147 1528 aaKnown RBP5.72□□□□□ -1.49
PMC1YGL006W MMS22Q06164 1454 aa5.72□□□□□ -1.49
PMC1YGL006W SPT6P23615 1451 aaKnown RBP5.69□□□□□ -1.5
PMC1YGL006W ENP1P38333 483 aaKnown RBP5.69□□□□□ -1.5
PMC1YGL006W SPT7P35177 1332 aa5.67□□□□□ -1.5
PMC1YGL006W ORC1P54784 914 aaPredicted RBP5.66□□□□□ -1.5
PMC1YGL006W CAB3P36076 571 aa5.65□□□□□ -1.5
PMC1YGL006W HSL1P34244 1518 aa5.64□□□□□ -1.51
PMC1YGL006W IKI3Q06706 1349 aaKnown RBP5.61□□□□□ -1.51
PMC1YGL006W TRM732Q03496 1420 aa5.59□□□□□ -1.51
PMC1YGL006W SSM4P40318 1319 aa5.59□□□□□ -1.51
PMC1YGL006W FUN12P39730 1002 aaKnown RBP5.59□□□□□ -1.51
PMC1YGL006W YPR148CQ06523 435 aa5.59□□□□□ -1.51
PMC1YGL006W STU1P38198 1513 aa5.59□□□□□ -1.52
PMC1YGL006W YTA7P40340 1379 aa5.56□□□□□ -1.52
PMC1YGL006W HIR3P47171 1648 aa5.56□□□□□ -1.52
PMC1YGL006W STH1P32597 1359 aa5.55□□□□□ -1.52
PMC1YGL006W REV3P14284 1504 aa5.55□□□□□ -1.52
PMC1YGL006W MYO2P19524 1574 aaKnown RBP5.55□□□□□ -1.52
PMC1YGL006W EBP2P36049 427 aaKnown RBP5.54□□□□□ -1.52
PMC1YGL006W UFD4P33202 1483 aa5.53□□□□□ -1.52
PMC1YGL006W YFR016CP43597 1233 aaKnown RBP5.53□□□□□ -1.52
PMC1YGL006W PSD2P53037 1138 aaKnown RBP5.52□□□□□ -1.53
PMC1YGL006W SEC3P33332 1336 aaKnown RBP5.52□□□□□ -1.53
PMC1YGL006W CHD1P32657 1468 aa5.51□□□□□ -1.53
PMC1YGL006W SPP41P38904 1435 aa5.51□□□□□ -1.53
PMC1YGL006W BPT1P14772 1559 aa5.51□□□□□ -1.53
PMC1YGL006W PAN1P32521 1480 aa5.5□□□□□ -1.53
PMC1YGL006W PRS1P32895 427 aaKnown RBP5.49□□□□□ -1.53
PMC1YGL006W TY1B-DR4Q07793 1604 aa5.49□□□□□ -1.53
PMC1YGL006W SCC2Q04002 1493 aa5.48□□□□□ -1.53
PMC1YGL006W BUD4P47136 1447 aa5.47□□□□□ -1.53
PMC1YGL006W NOP7P53261 605 aaKnown RBP5.47□□□□□ -1.53
PMC1YGL006W TFA1P36100 482 aa5.46□□□□□ -1.54
PMC1YGL006W MNN4P36044 1178 aa5.45□□□□□ -1.54
PMC1YGL006W EAF7P53911 425 aaKnown RBP5.44□□□□□ -1.54
PMC1YGL006W RPC31P17890 251 aa5.44□□□□□ -1.54
PMC1YGL006W THO2P53552 1597 aaKnown RBP5.44□□□□□ -1.54
PMC1YGL006W CKB1P43639 278 aa5.43□□□□□ -1.54
PMC1YGL006W CFT1Q06632 1357 aaKnown RBP5.43□□□□□ -1.54
PMC1YGL006W LEO1P38439 464 aa5.43□□□□□ -1.54
PMC1YGL006W POL1P13382 1468 aa5.42□□□□□ -1.54
PMC1YGL006W SMC4Q12267 1418 aa5.42□□□□□ -1.54
PMC1YGL006W SSK2P53599 1579 aa5.41□□□□□ -1.54
PMC1YGL006W FPR3P38911 411 aaKnown RBP5.41□□□□□ -1.54
PMC1YGL006W CLC1P17891 233 aa5.4□□□□□ -1.54
PMC1YGL006W TSC11P40061 1430 aa5.39□□□□□ -1.55
PMC1YGL006W GEA1P47102 1408 aaPredicted RBP5.39□□□□□ -1.55
PMC1YGL006W AIM44Q99299 758 aa5.39□□□□□ -1.55
PMC1YGL006W ECM5Q03214 1411 aa5.38□□□□□ -1.55
PMC1YGL006W SWR1Q05471 1514 aa5.37□□□□□ -1.55
PMC1YGL006W PAF1P38351 445 aa5.35□□□□□ -1.55
PMC1YGL006W PDS5Q04264 1277 aa5.35□□□□□ -1.55
PMC1YGL006W DNA2P38859 1522 aa5.35□□□□□ -1.55
PMC1YGL006W RKR1Q04781 1562 aa5.35□□□□□ -1.55
PMC1YGL006W ESP1Q03018 1630 aa5.34□□□□□ -1.55
PMC1YGL006W SNQ2P32568 1501 aaKnown RBP5.34□□□□□ -1.55
PMC1YGL006W IME2P32581 645 aa5.34□□□□□ -1.55
PMC1YGL006W SIN3P22579 1536 aa5.34□□□□□ -1.55
PMC1YGL006W MON2P48563 1636 aaPredicted RBP5.34□□□□□ -1.55
PMC1YGL006W YRB30P53107 440 aaPredicted RBP5.34□□□□□ -1.56
PMC1YGL006W BUD21Q08492 214 aaPredicted RBP5.33□□□□□ -1.56
PMC1YGL006W URN1Q06525 465 aaKnown RBP5.33□□□□□ -1.56
PMC1YGL006W DJP1P40564 432 aa5.32□□□□□ -1.56
PMC1YGL006W NST1P53935 1240 aa5.32□□□□□ -1.56
PMC1YGL006W YOR1P53049 1477 aa5.32□□□□□ -1.56
PMC1YGL006W TAF5P38129 798 aa5.31□□□□□ -1.56
PMC1YGL006W MYO4P32492 1471 aa5.31□□□□□ -1.56
PMC1YGL006W PDR15Q04182 1529 aaKnown RBP5.3□□□□□ -1.56
PMC1YGL006W YPK9Q12697 1472 aa5.3□□□□□ -1.56
PMC1YGL006W MHP1P43638 1398 aa5.3□□□□□ -1.56
PMC1YGL006W PDR10P51533 1564 aa5.29□□□□□ -1.56
PMC1YGL006W KIP3P53086 805 aaKnown RBP5.29□□□□□ -1.56
PMC1YGL006W OPY1P38271 328 aa5.27□□□□□ -1.57
PMC1YGL006W RVB2Q12464 471 aaKnown RBP5.27□□□□□ -1.57
PMC1YGL006W TOP2P06786 1428 aaKnown RBP5.27□□□□□ -1.57
PMC1YGL006W VPS15P22219 1454 aa5.27□□□□□ -1.57
PMC1YGL006W PRI1P10363 409 aa5.27□□□□□ -1.57
PMC1YGL006W YDL144CQ07589 356 aa5.26□□□□□ -1.57
PMC1YGL006W YCF1P39109 1515 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms