RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C LTP1P40347 161 aa1.83□□□□□ -2.12
MSH6YDR097C YJL068CP40363 299 aa1.83□□□□□ -2.12
MSH6YDR097C IST3P40565 148 aaPredicted RBP1.83□□□□□ -2.12
MSH6YDR097C ECL1P48235 211 aa1.83□□□□□ -2.12
MSH6YDR097C MRX6P48564 524 aa1.83□□□□□ -2.12
MSH6YDR097C FMS1P50264 508 aa1.83□□□□□ -2.12
MSH6YDR097C SPT20P50875 604 aa1.83□□□□□ -2.12
MSH6YDR097C YGR016WP53209 190 aa1.83□□□□□ -2.12
MSH6YDR097C SMX3P54999 86 aaPredicted RBP1.83□□□□□ -2.12
MSH6YDR097C RPA49Q01080 415 aaPredicted RBP1.83□□□□□ -2.12
MSH6YDR097C AAT1Q01802 451 aa1.83□□□□□ -2.12
MSH6YDR097C TY2A-DR2Q03483 438 aa1.83□□□□□ -2.12
MSH6YDR097C RCF1Q03713 159 aa1.83□□□□□ -2.12
MSH6YDR097C GRX3Q03835 250 aa1.83□□□□□ -2.12
MSH6YDR097C MGR3Q04472 501 aa1.83□□□□□ -2.12
MSH6YDR097C YDR341CQ05506 607 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C ACK1Q07622 623 aaPredicted RBP1.83□□□□□ -2.12
MSH6YDR097C RKM1Q08961 583 aaPredicted RBP1.83□□□□□ -2.12
MSH6YDR097C TY2A-BQ12260 438 aa1.83□□□□□ -2.12
MSH6YDR097C TY2A-OR2Q12293 438 aa1.83□□□□□ -2.12
MSH6YDR097C TY2A-DR1Q12392 438 aa1.83□□□□□ -2.12
MSH6YDR097C TY2A-OR1Q12439 438 aa1.83□□□□□ -2.12
MSH6YDR097C TY2A-DR3Q99303 438 aa1.83□□□□□ -2.12
MSH6YDR097C GAL80P04387 435 aa1.83□□□□□ -2.12
MSH6YDR097C APE1P14904 514 aa1.83□□□□□ -2.12
MSH6YDR097C THR1P17423 357 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C CLB2P24869 491 aa1.83□□□□□ -2.12
MSH6YDR097C EMC1P25574 760 aa1.83□□□□□ -2.12
MSH6YDR097C ELF1P36053 145 aa1.83□□□□□ -2.12
MSH6YDR097C CHS7P38843 316 aa1.83□□□□□ -2.12
MSH6YDR097C SPO22P40511 975 aa1.83□□□□□ -2.12
MSH6YDR097C SWP82P43554 623 aa1.83□□□□□ -2.12
MSH6YDR097C BUD27P43573 796 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
MSH6YDR097C MTL1P53214 551 aa1.83□□□□□ -2.12
MSH6YDR097C DRN1P53255 507 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C BOP3P53958 396 aa1.83□□□□□ -2.12
MSH6YDR097C EFR3Q03653 782 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C NDL1Q06568 189 aa1.83□□□□□ -2.12
MSH6YDR097C YDL242WQ07746 117 aa1.83□□□□□ -2.12
MSH6YDR097C CTI6Q08923 506 aa1.83□□□□□ -2.12
MSH6YDR097C AFI1Q99222 893 aa1.83□□□□□ -2.12
MSH6YDR097C CYC7P00045 113 aa1.83□□□□□ -2.12
MSH6YDR097C CBP1P07252 654 aa1.83□□□□□ -2.12
MSH6YDR097C DFR1P07807 211 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
MSH6YDR097C FEN2P25621 512 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C CBR1P38626 284 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C MUP3P38734 546 aa1.83□□□□□ -2.12
MSH6YDR097C YHR097CP38809 366 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C YIL161WP40449 235 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C YIR042CP40586 236 aa1.83□□□□□ -2.12
MSH6YDR097C CUL3P53202 744 aa1.83□□□□□ -2.12
MSH6YDR097C MRPL22P53881 309 aa1.83□□□□□ -2.12
MSH6YDR097C CTK1Q03957 528 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C MRD1Q06106 887 aaKnown RBP1.83□□□□□ -2.12
MSH6YDR097C YEH1Q07804 573 aa1.83□□□□□ -2.12
MSH6YDR097C YOR389WQ08912 624 aa1.83□□□□□ -2.12
MSH6YDR097C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
MSH6YDR097C PGC1Q08959 321 aa1.83□□□□□ -2.12
MSH6YDR097C VPS54Q12071 889 aa1.83□□□□□ -2.12
MSH6YDR097C LCB4Q12246 624 aa1.83□□□□□ -2.12
MSH6YDR097C PMA2P19657 947 aa1.82□□□□□ -2.12
MSH6YDR097C REC107P21651 314 aa1.82□□□□□ -2.12
MSH6YDR097C CNE1P27825 502 aa1.82□□□□□ -2.12
MSH6YDR097C LIP5P32875 414 aa1.82□□□□□ -2.12
MSH6YDR097C KES1P35844 434 aaKnown RBP1.82□□□□□ -2.12
MSH6YDR097C CAJ1P39101 391 aa1.82□□□□□ -2.12
MSH6YDR097C JEM1P40358 645 aa1.82□□□□□ -2.12
MSH6YDR097C SAE2P46946 345 aa1.82□□□□□ -2.12
MSH6YDR097C YJL163CP46996 555 aa1.82□□□□□ -2.12
MSH6YDR097C EFM3P47163 339 aa1.82□□□□□ -2.12
MSH6YDR097C CTR1P49573 406 aa1.82□□□□□ -2.12
MSH6YDR097C YNL144CP53907 740 aa1.82□□□□□ -2.12
MSH6YDR097C ADA2Q02336 434 aa1.82□□□□□ -2.12
MSH6YDR097C RSM28Q03430 361 aa1.82□□□□□ -2.12
MSH6YDR097C RPC11Q04307 110 aaPredicted RBP1.82□□□□□ -2.12
MSH6YDR097C SPH1Q06160 661 aa1.82□□□□□ -2.12
MSH6YDR097C SIL1Q08199 421 aa1.82□□□□□ -2.12
MSH6YDR097C SMF3Q12078 473 aaPredicted RBP1.82□□□□□ -2.12
MSH6YDR097C CFT2Q12102 859 aaPredicted RBP1.82□□□□□ -2.12
MSH6YDR097C SFI1Q12369 946 aa1.82□□□□□ -2.12
MSH6YDR097C YOL159C-AQ3E769 90 aa1.82□□□□□ -2.12
MSH6YDR097C JIP3O13555 125 aa1.82□□□□□ -2.12
MSH6YDR097C YPK1P12688 680 aaKnown RBP1.82□□□□□ -2.12
MSH6YDR097C SEC63P14906 663 aa1.82□□□□□ -2.12
MSH6YDR097C STE50P25344 346 aa1.82□□□□□ -2.12
MSH6YDR097C OCA4P25366 362 aa1.82□□□□□ -2.12
MSH6YDR097C RFA2P26754 273 aaKnown RBP1.82□□□□□ -2.12
MSH6YDR097C BRF1P29056 596 aa1.82□□□□□ -2.12
MSH6YDR097C PAP1P29468 568 aaKnown RBP1.82□□□□□ -2.12
MSH6YDR097C TRM2P33753 639 aa1.82□□□□□ -2.12
MSH6YDR097C SMF1P38925 575 aa1.82□□□□□ -2.12
MSH6YDR097C LYS4P49367 693 aaPredicted RBP1.82□□□□□ -2.12
MSH6YDR097C NMA2P53204 395 aa1.82□□□□□ -2.12
MSH6YDR097C OAZ1Q02803 292 aa1.82□□□□□ -2.12
MSH6YDR097C YLR224WQ05947 369 aa1.82□□□□□ -2.12
MSH6YDR097C RIX7Q07844 837 aaKnown RBP1.82□□□□□ -2.12
MSH6YDR097C UAF30Q08747 228 aa1.82□□□□□ -2.12
MSH6YDR097C NUS1Q12063 375 aa1.82□□□□□ -2.12
MSH6YDR097C MLH3Q12083 715 aa1.82□□□□□ -2.12
MSH6YDR097C NBP2Q12163 236 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms