RNA–Protein interactions for RNA: YCR085W

YCR085W, Transcript of Dubious open reading frame, yeast

Gene YCR085W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR085W	YCR085W	XRS2	P33301	854 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	APL3	P38065	1025 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	YNL195C	P40168	261 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	ASG1	P40467	964 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	UFE1	P41834	346 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	GUF1	P46943	645 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	RFX1	P48743	811 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	COX18	P53239	316 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	YLR407W	Q06070	228 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	DCS2	Q12123	353 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	RGT2	Q12300	763 aa		4.09	□□□□□ -1.75
YCR085W	YCR085W	STE12	P13574	688 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	ARF2	P19146	181 aa	Known RBP	4.08	□□□□□ -1.76
YCR085W	YCR085W	PTI1	P39927	425 aa	Predicted RBP	4.08	□□□□□ -1.76
YCR085W	YCR085W	UBP7	P40453	1071 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	CDC1	P40986	491 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	PEX14	P53112	341 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	YDR179W-A	Q03983	463 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	ARG7	Q04728	441 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	RTN1	Q04947	295 aa	Known RBP	4.08	□□□□□ -1.76
YCR085W	YCR085W	ATG33	Q06485	197 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	DDC1	Q08949	612 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	NBP2	Q12163	236 aa		4.08	□□□□□ -1.76
YCR085W	YCR085W	ERG20	P08524	352 aa	Known RBP	4.07	□□□□□ -1.76
YCR085W	YCR085W	RPL43A	P0CX25	92 aa	Known RBP	4.07	□□□□□ -1.76
YCR085W	YCR085W	RPL43B	P0CX26	92 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	PHO8	P11491	566 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	IME1	P21190	360 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	DAL82	P21705	255 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	APN1	P22936	367 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	PCL2	P25693	308 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	SGE1	P33335	543 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	BEM4	P39011	633 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	KAP123	P40069	1113 aa	Known RBP	4.07	□□□□□ -1.76
YCR085W	YCR085W	DSE1	P40077	573 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	FTR1	P40088	404 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	PMT6	P42934	759 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	SMC3	P47037	1230 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	BIT61	P47041	543 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	YJR054W	P47114	497 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	SWS2	P53937	143 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	PIR3	Q03180	325 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	UFO1	Q04511	668 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	IZH3	Q07959	543 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	RPN8	Q08723	338 aa	Known RBP	4.07	□□□□□ -1.76
YCR085W	YCR085W	YLR125W	Q12138	136 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	LCB4	Q12246	624 aa		4.07	□□□□□ -1.76
YCR085W	YCR085W	NAT1	P12945	854 aa	Known RBP	4.06	□□□□□ -1.76
YCR085W	YCR085W	LRE1	P25579	583 aa	Known RBP	4.06	□□□□□ -1.76
YCR085W	YCR085W	EFB1	P32471	206 aa	Known RBP	4.06	□□□□□ -1.76
YCR085W	YCR085W	PET127	P32606	800 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	PRS1	P32895	427 aa	Known RBP	4.06	□□□□□ -1.76
YCR085W	YCR085W	CYM1	P32898	989 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	HOT13	P36078	116 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	MRPL40	P36534	297 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YCR085W	YCR085W	DSS1	P39112	969 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	SER33	P40510	469 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	THI6	P41835	540 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	FET5	P43561	622 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	NBP1	P52919	319 aa	Predicted RBP	4.06	□□□□□ -1.76
YCR085W	YCR085W	YGL117W	P53133	265 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	CPR8	P53728	308 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	RTC4	P53850	401 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	NGL2	Q03264	515 aa	Known RBP	4.06	□□□□□ -1.76
YCR085W	YCR085W	CEF1	Q03654	590 aa	Predicted RBP	4.06	□□□□□ -1.76
YCR085W	YCR085W	TRM82	Q03774	444 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	CIR2	Q08822	631 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	NDD1	Q08887	554 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	SAM4	Q08985	325 aa	Known RBP	4.06	□□□□□ -1.76
YCR085W	YCR085W	NAG1	Q8TGN9	163 aa		4.06	□□□□□ -1.76
YCR085W	YCR085W	HMG1	P12683	1054 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	SEC63	P14906	663 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	RRT12	P25381	491 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	CAP1	P28495	268 aa	Known RBP	4.05	□□□□□ -1.76
YCR085W	YCR085W	ECM13	P38195	257 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	COS111	P38308	924 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	XBP1	P40489	647 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	YIL077C	P40508	320 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	DSN1	P40568	576 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	LCB2	P40970	561 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	CIS3	P47001	227 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	AIM23	P47015	356 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	MZM1	Q03429	123 aa	Predicted RBP	4.05	□□□□□ -1.76
YCR085W	YCR085W	YML096W	Q04489	525 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	HRD3	Q05787	833 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	VPS36	Q06696	566 aa		4.05	□□□□□ -1.76
YCR085W	YCR085W	ABP140	Q08641	628 aa	Known RBP	4.05	□□□□□ -1.76
YCR085W	YCR085W	FOB1	O13329	566 aa		4.04	□□□□□ -1.76
YCR085W	YCR085W	PEX6	P33760	1030 aa		4.04	□□□□□ -1.76
YCR085W	YCR085W	RSM25	P40496	264 aa		4.04	□□□□□ -1.76
YCR085W	YCR085W	TAX4	P47030	604 aa		4.04	□□□□□ -1.76
YCR085W	YCR085W	MPS1	P54199	764 aa		4.04	□□□□□ -1.76
YCR085W	YCR085W	GPD1	Q00055	391 aa	Known RBP	4.04	□□□□□ -1.76
YCR085W	YCR085W	YPL068C	Q02749	293 aa		4.04	□□□□□ -1.76
YCR085W	YCR085W	ENT2	Q05785	613 aa		4.04	□□□□□ -1.76
YCR085W	YCR085W	ECM38	Q05902	660 aa	Predicted RBP	4.04	□□□□□ -1.76
YCR085W	YCR085W	BNA5	Q05979	453 aa		4.04	□□□□□ -1.76
YCR085W	YCR085W	FRS1	P15624	595 aa	Known RBP	4.03	□□□□□ -1.76
YCR085W	YCR085W	NUP1	P20676	1076 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms