RNA–Protein interactions for RNA: YNL073W

MSK1, Transcript of Mitochondrial lysine-tRNA synthetase, yeast

Gene MSK1, Length 1,731 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSK1	YNL073W	VAN1	P23642	535 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	RFA2	P26754	273 aa	Known RBP	4.12	□□□□□ -1.75
MSK1	YNL073W	GDA1	P32621	518 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	TFC3	P34111	1160 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	LRG1	P35688	1017 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	SRX1	P36077	127 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	MEF2	P39677	819 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	GIP4	P39732	760 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	TFG1	P41895	735 aa	Predicted RBP	4.12	□□□□□ -1.75
MSK1	YNL073W	ZIP2	P53061	704 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	YGL108C	P53139	140 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	NPY1	P53164	384 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	BUD32	P53323	261 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	RCF2	P53721	224 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	USA1	Q03714	838 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	RPN9	Q04062	393 aa	Known RBP	4.12	□□□□□ -1.75
MSK1	YNL073W	YLR177W	Q06251	628 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	YET3	Q07451	203 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	SMF3	Q12078	473 aa	Predicted RBP	4.12	□□□□□ -1.75
MSK1	YNL073W	SLP1	Q12232	587 aa		4.12	□□□□□ -1.75
MSK1	YNL073W	STE2	D6VTK4	431 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	COX3	P00420	269 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	CPA1	P07258	411 aa	Known RBP	4.11	□□□□□ -1.75
MSK1	YNL073W	AMD1	P15274	810 aa	Known RBP	4.11	□□□□□ -1.75
MSK1	YNL073W	TRX2	P22803	104 aa	Known RBP	4.11	□□□□□ -1.75
MSK1	YNL073W	RML2	P32611	393 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	TFB1	P32776	642 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	PRP18	P33411	251 aa	Predicted RBP	4.11	□□□□□ -1.75
MSK1	YNL073W	LTV1	P34078	463 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	THI80	P35202	319 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	YPT52	P36018	234 aa	Known RBP	4.11	□□□□□ -1.75
MSK1	YNL073W	HSE1	P38753	452 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	YHR182W	P38870	785 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	YJL070C	P40361	888 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	YJL107C	P42947	387 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	GCD14	P46959	383 aa	Predicted RBP	4.11	□□□□□ -1.75
MSK1	YNL073W	RPC11	Q04307	110 aa	Predicted RBP	4.11	□□□□□ -1.75
MSK1	YNL073W	ATG10	Q07879	167 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	VHS3	Q08438	674 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	VPS68	Q12016	184 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	MCD1	Q12158	566 aa		4.11	□□□□□ -1.75
MSK1	YNL073W	ARG4	P04076	463 aa	Predicted RBP	4.1	□□□□□ -1.75
MSK1	YNL073W	SWI5	P08153	709 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	RPB2	P08518	1224 aa	Known RBP	4.1	□□□□□ -1.75
MSK1	YNL073W	ERG20	P08524	352 aa	Known RBP	4.1	□□□□□ -1.75
MSK1	YNL073W	MPH2	P0CD99	609 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	SSC1	P0CS90	654 aa	Known RBP	4.1	□□□□□ -1.75
MSK1	YNL073W	GLN4	P13188	809 aa	Known RBP	4.1	□□□□□ -1.75
MSK1	YNL073W	SPT15	P13393	240 aa	Known RBP	4.1	□□□□□ -1.75
MSK1	YNL073W	YCR099C	P25657	155 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	MSH1	P25846	959 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	CIN8	P27895	1000 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	BEM1	P29366	551 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	TIP20	P33891	701 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	OAF3	P36023	863 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	GMH1	P36125	273 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	PFS1	P38872	237 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	CYC2	P38909	366 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	TIM17	P39515	158 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	HST2	P53686	357 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	FRE4	P53746	719 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	VAC7	P53950	1165 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	TAF11	Q04226	346 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	BUD22	Q04347	519 aa	Known RBP	4.1	□□□□□ -1.75
MSK1	YNL073W	HEL2	Q05580	639 aa	Known RBP	4.1	□□□□□ -1.75
MSK1	YNL073W	VTA1	Q06263	330 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	GRS2	Q06817	618 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	NUS1	Q12063	375 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	YKL068W-A	Q3E826	78 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	NAG1	Q8TGN9	163 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	RGS2	Q99188	309 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	FMP27	Q06179	2628 aa		4.1	□□□□□ -1.75
MSK1	YNL073W	NSP1	P14907	823 aa	Known RBP	4.09	□□□□□ -1.75
MSK1	YNL073W	YSR3	P23501	404 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	YCR051W	P25631	222 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	MRPL9	P31334	269 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	GCD11	P32481	527 aa	Known RBP	4.09	□□□□□ -1.75
MSK1	YNL073W	CYM1	P32898	989 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	MUM2	P38236	366 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	YHR020W	P38708	688 aa	Known RBP	4.09	□□□□□ -1.75
MSK1	YNL073W	MUP3	P38734	546 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	PCL5	P38794	229 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	SSN3	P39073	555 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	PEP8	P40335	379 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	IRR1	P40541	1150 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	LIA1	P47120	325 aa	Known RBP	4.09	□□□□□ -1.75
MSK1	YNL073W	BIR1	P47134	954 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	BOL2	P53082	120 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	ZRG17	P53735	605 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	SPO20	Q04359	397 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	ARG7	Q04728	441 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	YDL129W	Q07555	291 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
MSK1	YNL073W	PLB3	Q08108	686 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	RUD3	Q12234	484 aa	Known RBP	4.09	□□□□□ -1.75
MSK1	YNL073W	NCA2	Q12374	616 aa		4.09	□□□□□ -1.75
MSK1	YNL073W	SBP1	P10080	294 aa	Known RBP	4.09	□□□□□ -1.76
MSK1	YNL073W	RSR1	P13856	272 aa		4.09	□□□□□ -1.76
MSK1	YNL073W	SCL1	P21243	252 aa	Known RBP	4.09	□□□□□ -1.76
MSK1	YNL073W	PHO3	P24031	467 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms