RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YSH1Q06224 779 aaPredicted RBP1.83□□□□□ -2.12
RTP1YMR185W CDA1Q06702 301 aa1.83□□□□□ -2.12
RTP1YMR185W PEX15Q08215 383 aa1.83□□□□□ -2.12
RTP1YMR185W TMA46Q12000 345 aaKnown RBP1.83□□□□□ -2.12
RTP1YMR185W TEF1P02994 458 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W TUB1P09733 447 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W HEM1P09950 548 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W WHI2P12611 486 aa1.82□□□□□ -2.12
RTP1YMR185W SLY1P22213 666 aa1.82□□□□□ -2.12
RTP1YMR185W CMK2P22517 447 aa1.82□□□□□ -2.12
RTP1YMR185W ERG6P25087 383 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W ADY2P25613 283 aa1.82□□□□□ -2.12
RTP1YMR185W ITR2P30606 609 aa1.82□□□□□ -2.12
RTP1YMR185W BCS1P32839 456 aa1.82□□□□□ -2.12
RTP1YMR185W ATO2P32907 282 aa1.82□□□□□ -2.12
RTP1YMR185W SRP101P32916 621 aa1.82□□□□□ -2.12
RTP1YMR185W RPT5P33297 434 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W KES1P35844 434 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W MRX3P38172 270 aa1.82□□□□□ -2.12
RTP1YMR185W YBL028CP38202 106 aa1.82□□□□□ -2.12
RTP1YMR185W PCF11P39081 626 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W SIT1P39980 628 aa1.82□□□□□ -2.12
RTP1YMR185W CHS6P40955 746 aa1.82□□□□□ -2.12
RTP1YMR185W FAR3P46671 204 aa1.82□□□□□ -2.12
RTP1YMR185W BNA3P47039 444 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W IMD4P50094 524 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W PSP1P50896 841 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W IMA1P53051 589 aa1.82□□□□□ -2.12
RTP1YMR185W GET1P53192 235 aa1.82□□□□□ -2.12
RTP1YMR185W YGR016WP53209 190 aa1.82□□□□□ -2.12
RTP1YMR185W GTF1P53260 183 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W ASI2P53895 289 aa1.82□□□□□ -2.12
RTP1YMR185W SED5Q01590 340 aa1.82□□□□□ -2.12
RTP1YMR185W GCN5Q03330 439 aa1.82□□□□□ -2.12
RTP1YMR185W DUS4Q06063 367 aa1.82□□□□□ -2.12
RTP1YMR185W SPH1Q06160 661 aa1.82□□□□□ -2.12
RTP1YMR185W IES4Q08561 116 aa1.82□□□□□ -2.12
RTP1YMR185W RKM1Q08961 583 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W NSL1Q12143 216 aa1.82□□□□□ -2.12
RTP1YMR185W YLL056CQ12177 298 aa1.82□□□□□ -2.12
RTP1YMR185W HER1Q12276 1246 aa1.82□□□□□ -2.12
RTP1YMR185W RGS2Q99188 309 aa1.82□□□□□ -2.12
RTP1YMR185W CAR1P00812 333 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W REP1P03871 373 aa1.82□□□□□ -2.12
RTP1YMR185W CBP2P03874 630 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W TPK2P06245 380 aa1.82□□□□□ -2.12
RTP1YMR185W MSS18P08593 268 aa1.82□□□□□ -2.12
RTP1YMR185W RAD18P10862 487 aa1.82□□□□□ -2.12
RTP1YMR185W VPS3P23643 1011 aa1.82□□□□□ -2.12
RTP1YMR185W HSP30P25619 332 aa1.82□□□□□ -2.12
RTP1YMR185W PER1P25625 357 aa1.82□□□□□ -2.12
RTP1YMR185W RPS5P26783 225 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W PMI40P29952 429 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W URA10P30402 227 aa1.82□□□□□ -2.12
RTP1YMR185W RME1P32338 300 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W PHA2P32452 334 aa1.82□□□□□ -2.12
RTP1YMR185W APE2P32454 952 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W SMI1P32566 505 aa1.82□□□□□ -2.12
RTP1YMR185W NPL6P32832 435 aa1.82□□□□□ -2.12
RTP1YMR185W SKG6P32900 734 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W TYE7P33122 291 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W ATG19P35193 415 aa1.82□□□□□ -2.12
RTP1YMR185W OCT1P35999 772 aa1.82□□□□□ -2.12
RTP1YMR185W FRE2P36033 711 aa1.82□□□□□ -2.12
RTP1YMR185W YPK3P38070 525 aa1.82□□□□□ -2.12
RTP1YMR185W FMP23P38231 175 aa1.82□□□□□ -2.12
RTP1YMR185W SLM4P38247 162 aa1.82□□□□□ -2.12
RTP1YMR185W GGA2P38817 585 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W FLC2P39719 783 aa1.82□□□□□ -2.12
RTP1YMR185W SAW1P39735 261 aa1.82□□□□□ -2.12
RTP1YMR185W KHA1P40309 873 aa1.82□□□□□ -2.12
RTP1YMR185W RIC1P40395 1056 aa1.82□□□□□ -2.12
RTP1YMR185W UBP7P40453 1071 aa1.82□□□□□ -2.12
RTP1YMR185W MET18P40469 1032 aa1.82□□□□□ -2.12
RTP1YMR185W ATG36P46983 293 aa1.82□□□□□ -2.12
RTP1YMR185W ASN1P49089 572 aaKnown RBP1.82□□□□□ -2.12
RTP1YMR185W RTT102P53330 157 aa1.82□□□□□ -2.12
RTP1YMR185W MUB1Q03162 620 aa1.82□□□□□ -2.12
RTP1YMR185W SLD5Q03406 294 aa1.82□□□□□ -2.12
RTP1YMR185W RRP17Q04031 235 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W URC2Q04411 772 aa1.82□□□□□ -2.12
RTP1YMR185W CRF1Q04930 467 aa1.82□□□□□ -2.12
RTP1YMR185W GPI13Q07830 1017 aa1.82□□□□□ -2.12
RTP1YMR185W DIA2Q08496 732 aaPredicted RBP1.82□□□□□ -2.12
RTP1YMR185W RCN2Q12044 265 aa1.82□□□□□ -2.12
RTP1YMR185W HOS1Q12214 470 aa1.82□□□□□ -2.12
RTP1YMR185W GPR1Q12361 961 aa1.82□□□□□ -2.12
RTP1YMR185W ADF1Q2V2Q1 113 aa1.82□□□□□ -2.12
RTP1YMR185W STE2D6VTK4 431 aa1.81□□□□□ -2.12
RTP1YMR185W PMA1P05030 918 aaKnown RBP1.81□□□□□ -2.12
RTP1YMR185W COR1P07256 457 aa1.81□□□□□ -2.12
RTP1YMR185W HMG2P12684 1045 aa1.81□□□□□ -2.12
RTP1YMR185W FBA1P14540 359 aaKnown RBP1.81□□□□□ -2.12
RTP1YMR185W GCN3P14741 305 aa1.81□□□□□ -2.12
RTP1YMR185W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
RTP1YMR185W SNT1P25357 1226 aa1.81□□□□□ -2.12
RTP1YMR185W HRR25P29295 494 aaKnown RBP1.81□□□□□ -2.12
RTP1YMR185W MEI4P29467 408 aa1.81□□□□□ -2.12
RTP1YMR185W ZIP1P31111 875 aa1.81□□□□□ -2.12
RTP1YMR185W GDA1P32621 518 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms