RNA–Protein interactions for RNA: YMR030W

RSF1, Transcript of Protein required for respiratory growth, yeast

Gene RSF1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSF1	YMR030W	ZDS2	P54786	942 aa		4.93	□□□□□ -1.62
RSF1	YMR030W	PRP42	Q03776	544 aa	Known RBP	4.93	□□□□□ -1.62
RSF1	YMR030W	URK1	P27515	501 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	MSS51	P32335	436 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	FSH1	P38777	243 aa	Known RBP	4.92	□□□□□ -1.62
RSF1	YMR030W	PSF2	P40359	213 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	UBP7	P40453	1071 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	YJL107C	P42947	387 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	YNL050C	P53952	270 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	FCP1	Q03254	732 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	ATG23	Q06671	453 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	THI3	Q07471	609 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	SUL2	Q12325	893 aa		4.92	□□□□□ -1.62
RSF1	YMR030W	FLO11	P08640	1367 aa		4.91	□□□□□ -1.62
RSF1	YMR030W	COX1	P00401	534 aa		4.91	□□□□□ -1.62
RSF1	YMR030W	GAL4	P04386	881 aa		4.91	□□□□□ -1.62
RSF1	YMR030W	GCD7	P32502	381 aa	Predicted RBP	4.91	□□□□□ -1.62
RSF1	YMR030W	RPT3	P33298	428 aa	Known RBP	4.91	□□□□□ -1.62
RSF1	YMR030W	ARN1	P38731	627 aa		4.91	□□□□□ -1.62
RSF1	YMR030W	SPL2	P38839	148 aa		4.91	□□□□□ -1.62
RSF1	YMR030W	SPC72	P39723	622 aa		4.91	□□□□□ -1.62
RSF1	YMR030W	PHM8	P40025	321 aa		4.91	□□□□□ -1.62
RSF1	YMR030W	FAF1	P40546	346 aa	Predicted RBP	4.91	□□□□□ -1.62
RSF1	YMR030W	MEP2	P41948	499 aa		4.91	□□□□□ -1.62
RSF1	YMR030W	MTG1	Q03151	367 aa	Predicted RBP	4.91	□□□□□ -1.62
RSF1	YMR030W	ARP2	P32381	391 aa	Known RBP	4.9	□□□□□ -1.63
RSF1	YMR030W	PXL1	P36166	706 aa		4.9	□□□□□ -1.63
RSF1	YMR030W	BUD16	P39988	312 aa		4.9	□□□□□ -1.63
RSF1	YMR030W	TPA1	P40032	644 aa	Known RBP	4.9	□□□□□ -1.63
RSF1	YMR030W	DJP1	P40564	432 aa		4.9	□□□□□ -1.63
RSF1	YMR030W	STB2	P46679	850 aa		4.9	□□□□□ -1.63
RSF1	YMR030W	RPL15B	P54780	204 aa	Predicted RBP	4.9	□□□□□ -1.63
RSF1	YMR030W	BAG7	Q12128	409 aa		4.9	□□□□□ -1.63
RSF1	YMR030W	UTP10	P42945	1769 aa	Known RBP	4.9	□□□□□ -1.63
RSF1	YMR030W	FAS2	P19097	1887 aa	Known RBP	4.9	□□□□□ -1.63
RSF1	YMR030W	VPS13	Q07878	3144 aa		4.9	□□□□□ -1.63
RSF1	YMR030W	YPT1	P01123	206 aa	Known RBP	4.89	□□□□□ -1.63
RSF1	YMR030W	AIM17	P23180	465 aa	Known RBP	4.89	□□□□□ -1.63
RSF1	YMR030W	CNA1	P23287	553 aa		4.89	□□□□□ -1.63
RSF1	YMR030W	SWI4	P25302	1093 aa	Known RBP	4.89	□□□□□ -1.63
RSF1	YMR030W	YHL041W	P38730	149 aa		4.89	□□□□□ -1.63
RSF1	YMR030W	PFA4	Q12006	378 aa		4.89	□□□□□ -1.63
RSF1	YMR030W	ATX2	Q12067	313 aa		4.89	□□□□□ -1.63
RSF1	YMR030W	RRI1	Q12468	440 aa		4.89	□□□□□ -1.63
RSF1	YMR030W	YPR117W	Q06116	2489 aa		4.88	□□□□□ -1.63
RSF1	YMR030W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RSF1	YMR030W	SEC18	P18759	758 aa	Known RBP	4.88	□□□□□ -1.63
RSF1	YMR030W	YCP4	P25349	247 aa	Known RBP	4.88	□□□□□ -1.63
RSF1	YMR030W	MSY1	P48527	492 aa		4.88	□□□□□ -1.63
RSF1	YMR030W	TAM41	P53230	385 aa		4.88	□□□□□ -1.63
RSF1	YMR030W	YDR109C	Q04585	715 aa		4.88	□□□□□ -1.63
RSF1	YMR030W	PHO81	P17442	1178 aa		4.87	□□□□□ -1.63
RSF1	YMR030W	LCB1	P25045	558 aa	Known RBP	4.87	□□□□□ -1.63
RSF1	YMR030W	OCT1	P35999	772 aa		4.87	□□□□□ -1.63
RSF1	YMR030W	ERG7	P38604	731 aa		4.87	□□□□□ -1.63
RSF1	YMR030W	CDC1	P40986	491 aa		4.87	□□□□□ -1.63
RSF1	YMR030W	MDV1	P47025	714 aa		4.87	□□□□□ -1.63
RSF1	YMR030W	RRP46	P53256	223 aa	Predicted RBP	4.87	□□□□□ -1.63
RSF1	YMR030W	YPR003C	P53394	754 aa		4.87	□□□□□ -1.63
RSF1	YMR030W	IRC4	Q03036	179 aa		4.87	□□□□□ -1.63
RSF1	YMR030W	TRS130	Q03660	1102 aa		4.87	□□□□□ -1.63
RSF1	YMR030W	MLP1	Q02455	1875 aa	Known RBP	4.86	□□□□□ -1.63
RSF1	YMR030W	CLB4	P24871	460 aa		4.86	□□□□□ -1.63
RSF1	YMR030W	LRE1	P25579	583 aa	Known RBP	4.86	□□□□□ -1.63
RSF1	YMR030W	PUG1	P40100	303 aa		4.86	□□□□□ -1.63
RSF1	YMR030W	ZAP1	P47043	880 aa		4.86	□□□□□ -1.63
RSF1	YMR030W	PDR8	Q06149	701 aa		4.86	□□□□□ -1.63
RSF1	YMR030W	YOL057W	Q08225	711 aa		4.86	□□□□□ -1.63
RSF1	YMR030W	SCO2	P38072	301 aa		4.85	□□□□□ -1.63
RSF1	YMR030W	NPR3	P38742	1146 aa		4.85	□□□□□ -1.63
RSF1	YMR030W	ASG1	P40467	964 aa		4.85	□□□□□ -1.63
RSF1	YMR030W	LYS20	P48570	428 aa	Known RBP	4.85	□□□□□ -1.63
RSF1	YMR030W	YNL144C	P53907	740 aa		4.85	□□□□□ -1.63
RSF1	YMR030W	ECM22	Q05958	814 aa	Predicted RBP	4.85	□□□□□ -1.63
RSF1	YMR030W	MCH4	Q08268	501 aa		4.85	□□□□□ -1.63
RSF1	YMR030W	UBX3	Q12229	455 aa		4.85	□□□□□ -1.63
RSF1	YMR030W	SWI1	P09547	1314 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	MRPL36	P36531	177 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	YBR138C	P38277	524 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	GND1	P38720	489 aa	Known RBP	4.84	□□□□□ -1.63
RSF1	YMR030W	KEL1	P38853	1164 aa	Known RBP	4.84	□□□□□ -1.63
RSF1	YMR030W	ACA1	P39970	489 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	RTR1	P40084	226 aa	Predicted RBP	4.84	□□□□□ -1.63
RSF1	YMR030W	YIR016W	P40572	265 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	YPT11	P48559	417 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	UBP8	P50102	471 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	DCP2	P53550	970 aa	Known RBP	4.84	□□□□□ -1.63
RSF1	YMR030W	LSC1	P53598	329 aa	Known RBP	4.84	□□□□□ -1.63
RSF1	YMR030W	PIG1	Q06216	648 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	VAM6	Q07468	1049 aa		4.84	□□□□□ -1.63
RSF1	YMR030W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RSF1	YMR030W	SUI3	P09064	285 aa	Known RBP	4.83	□□□□□ -1.64
RSF1	YMR030W	YML003W	P0CF16	290 aa		4.83	□□□□□ -1.64
RSF1	YMR030W	MRP2	P10663	115 aa	Predicted RBP	4.83	□□□□□ -1.64
RSF1	YMR030W	SPO16	P17122	198 aa		4.83	□□□□□ -1.64
RSF1	YMR030W	RFA2	P26754	273 aa	Known RBP	4.83	□□□□□ -1.64
RSF1	YMR030W	ATO2	P32907	282 aa		4.83	□□□□□ -1.64
RSF1	YMR030W	NUP120	P35729	1037 aa		4.83	□□□□□ -1.64
RSF1	YMR030W	NUP133	P36161	1157 aa		4.83	□□□□□ -1.64
RSF1	YMR030W	YIL161W	P40449	235 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms