RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W YDR286CQ05530 114 aa2.07□□□□□ -2.08
CFT2YLR115W RRP9Q06506 573 aaKnown RBP2.07□□□□□ -2.08
CFT2YLR115W SWA2Q06677 668 aa2.07□□□□□ -2.08
CFT2YLR115W SMC4Q12267 1418 aa2.07□□□□□ -2.08
CFT2YLR115W NUP188P52593 1655 aaKnown RBP2.07□□□□□ -2.08
CFT2YLR115W RTC1Q08281 1341 aa2.07□□□□□ -2.08
CFT2YLR115W VTH1P40438 1549 aa2.07□□□□□ -2.08
CFT2YLR115W VTH2P40890 1549 aa2.07□□□□□ -2.08
CFT2YLR115W BI2P03873 423 aa2.07□□□□□ -2.08
CFT2YLR115W SAN1P22470 610 aa2.07□□□□□ -2.08
CFT2YLR115W CMK1P27466 446 aaKnown RBP2.07□□□□□ -2.08
CFT2YLR115W PXL1P36166 706 aa2.07□□□□□ -2.08
CFT2YLR115W ERV46P39727 415 aa2.07□□□□□ -2.08
CFT2YLR115W SAP1P39955 897 aaKnown RBP2.07□□□□□ -2.08
CFT2YLR115W MAM1P40065 302 aa2.07□□□□□ -2.08
CFT2YLR115W SMK1P41808 388 aa2.07□□□□□ -2.08
CFT2YLR115W CIR1P42940 261 aa2.07□□□□□ -2.08
CFT2YLR115W YML6P51998 286 aa2.07□□□□□ -2.08
CFT2YLR115W COG2P53271 262 aa2.07□□□□□ -2.08
CFT2YLR115W OGG1P53397 376 aaPredicted RBP2.07□□□□□ -2.08
CFT2YLR115W TRS31Q03337 283 aa2.07□□□□□ -2.08
CFT2YLR115W PLM2Q04383 521 aa2.07□□□□□ -2.08
CFT2YLR115W TRI1Q05024 226 aa2.07□□□□□ -2.08
CFT2YLR115W SMF3Q12078 473 aaPredicted RBP2.07□□□□□ -2.08
CFT2YLR115W LYS21Q12122 440 aaKnown RBP2.07□□□□□ -2.08
CFT2YLR115W PSF3Q12146 194 aa2.07□□□□□ -2.08
CFT2YLR115W HER1Q12276 1246 aa2.07□□□□□ -2.08
CFT2YLR115W SFI1Q12369 946 aa2.07□□□□□ -2.08
CFT2YLR115W RED1P14291 827 aa2.06□□□□□ -2.08
CFT2YLR115W VMA2P16140 517 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W PFK2P16862 959 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
CFT2YLR115W MCM3P24279 971 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W COQ3P27680 312 aa2.06□□□□□ -2.08
CFT2YLR115W RAD16P31244 790 aa2.06□□□□□ -2.08
CFT2YLR115W IME2P32581 645 aa2.06□□□□□ -2.08
CFT2YLR115W BYE1P36106 594 aa2.06□□□□□ -2.08
CFT2YLR115W SPC97P38863 823 aa2.06□□□□□ -2.08
CFT2YLR115W SPC72P39723 622 aa2.06□□□□□ -2.08
CFT2YLR115W YEL068CP39977 110 aa2.06□□□□□ -2.08
CFT2YLR115W ARB1P40024 610 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W LAS21P40367 830 aa2.06□□□□□ -2.08
CFT2YLR115W ARF3P40994 183 aaRIP-Chip data2.06□□□□□ -2.08not detected
CFT2YLR115W YJL055WP47044 245 aa2.06□□□□□ -2.08
CFT2YLR115W MEP3P53390 489 aa2.06□□□□□ -2.08
CFT2YLR115W CNM67P53865 581 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
CFT2YLR115W ACS1Q01574 713 aa2.06□□□□□ -2.08
CFT2YLR115W RPT6Q01939 405 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W GET3Q12154 354 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W PET111P08468 800 aa2.06□□□□□ -2.08
CFT2YLR115W ADH4P10127 382 aa2.06□□□□□ -2.08
CFT2YLR115W TPM1P17536 199 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W SEC18P18759 758 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W AIM17P23180 465 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W PRE8P23639 250 aa2.06□□□□□ -2.08
CFT2YLR115W GSH1P32477 678 aa2.06□□□□□ -2.08
CFT2YLR115W SSE1P32589 693 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W MTG2P38860 518 aa2.06□□□□□ -2.08
CFT2YLR115W SPT8P38915 602 aa2.06□□□□□ -2.08
CFT2YLR115W SAW1P39735 261 aa2.06□□□□□ -2.08
CFT2YLR115W GDI1P39958 451 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W SCS2P40075 244 aaKnown RBP2.06□□□□□ -2.08
CFT2YLR115W IMA5P40884 581 aa2.06□□□□□ -2.08
CFT2YLR115W MEP2P41948 499 aa2.06□□□□□ -2.08
CFT2YLR115W BNA1P47096 177 aa2.06□□□□□ -2.08
CFT2YLR115W TAP42Q04372 366 aa2.06□□□□□ -2.08
CFT2YLR115W YKU80Q04437 629 aa2.06□□□□□ -2.08
CFT2YLR115W YPL191CQ08930 360 aa2.06□□□□□ -2.08
CFT2YLR115W PGC1Q08959 321 aa2.06□□□□□ -2.08
CFT2YLR115W APL4Q12028 832 aa2.06□□□□□ -2.08
CFT2YLR115W TSC11P40061 1430 aa2.06□□□□□ -2.08
CFT2YLR115W PHO3P24031 467 aa2.05□□□□□ -2.08
CFT2YLR115W GRR1P24814 1151 aa2.05□□□□□ -2.08
CFT2YLR115W DPH2P32461 534 aa2.05□□□□□ -2.08
CFT2YLR115W MDL1P33310 695 aa2.05□□□□□ -2.08
CFT2YLR115W TGL1P34163 548 aa2.05□□□□□ -2.08
CFT2YLR115W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
CFT2YLR115W MRPL36P36531 177 aa2.05□□□□□ -2.08
CFT2YLR115W RTT105P40063 208 aa2.05□□□□□ -2.08
CFT2YLR115W VFA1P40080 203 aa2.05□□□□□ -2.08
CFT2YLR115W PCL7P40186 285 aa2.05□□□□□ -2.08
CFT2YLR115W STB2P46679 850 aa2.05□□□□□ -2.08
CFT2YLR115W IDS2P46958 469 aa2.05□□□□□ -2.08
CFT2YLR115W CIK1Q01649 594 aa2.05□□□□□ -2.08
CFT2YLR115W YVH1Q02256 364 aaKnown RBP2.05□□□□□ -2.08
CFT2YLR115W VTC3Q02725 835 aa2.05□□□□□ -2.08
CFT2YLR115W YML053CQ04978 212 aa2.05□□□□□ -2.08
CFT2YLR115W SDH5Q08230 162 aa2.05□□□□□ -2.08
CFT2YLR115W PDR5P33302 1511 aaKnown RBP2.05□□□□□ -2.08
CFT2YLR115W VAS1P07806 1104 aaKnown RBP2.05□□□□□ -2.08
CFT2YLR115W PMS1P14242 873 aa2.05□□□□□ -2.08
CFT2YLR115W MER1P16523 270 aa2.05□□□□□ -2.08
CFT2YLR115W SPO16P17122 198 aa2.05□□□□□ -2.08
CFT2YLR115W AAC3P18238 307 aa2.05□□□□□ -2.08
CFT2YLR115W MNE1P24720 663 aa2.05□□□□□ -2.08
CFT2YLR115W MGM1P32266 881 aa2.05□□□□□ -2.08
CFT2YLR115W SMI1P32566 505 aa2.05□□□□□ -2.08
CFT2YLR115W PAH1P32567 862 aa2.05□□□□□ -2.08
CFT2YLR115W ERR3P42222 437 aa2.05□□□□□ -2.08
CFT2YLR115W LYS20P48570 428 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms