RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C GCN3P14741 305 aa8.69□□□□□ -1.02
SSL2YIL143C IST2P38250 946 aa8.69□□□□□ -1.02
SSL2YIL143C YHR131CP38835 850 aa8.69□□□□□ -1.02
SSL2YIL143C JJJ3P47138 172 aa8.69□□□□□ -1.02
SSL2YIL143C ADE12P80210 433 aaKnown RBP8.69□□□□□ -1.02
SSL2YIL143C CIK1Q01649 594 aa8.69□□□□□ -1.02
SSL2YIL143C ECM9Q02202 377 aa8.69□□□□□ -1.02
SSL2YIL143C YOR389WQ08912 624 aa8.69□□□□□ -1.02
SSL2YIL143C RPS9BP05755 195 aaKnown RBP8.69□□□□□ -1.02
SSL2YIL143C CBS2P14905 389 aa8.69□□□□□ -1.02
SSL2YIL143C THR1P17423 357 aaKnown RBP8.69□□□□□ -1.02
SSL2YIL143C UGA1P17649 471 aa8.69□□□□□ -1.02
SSL2YIL143C UBC8P28263 218 aa8.69□□□□□ -1.02
SSL2YIL143C CSE1P33307 960 aa8.69□□□□□ -1.02
SSL2YIL143C YKR023WP36119 530 aaKnown RBP8.69□□□□□ -1.02
SSL2YIL143C SKG1P36169 355 aa8.69□□□□□ -1.02
SSL2YIL143C SLI15P38283 698 aa8.69□□□□□ -1.02
SSL2YIL143C XDJ1P39102 459 aa8.69□□□□□ -1.02
SSL2YIL143C SWD1P39706 426 aa8.69□□□□□ -1.02
SSL2YIL143C YJR154WP47181 346 aa8.69□□□□□ -1.02
SSL2YIL143C SCS3P53012 380 aa8.69□□□□□ -1.02
SSL2YIL143C DSL1P53847 754 aa8.69□□□□□ -1.02
SSL2YIL143C KTR6P54070 446 aa8.69□□□□□ -1.02
SSL2YIL143C PLP1Q04004 230 aa8.69□□□□□ -1.02
SSL2YIL143C GGA1Q06336 557 aa8.69□□□□□ -1.02
SSL2YIL143C CTF3Q12748 733 aa8.69□□□□□ -1.02
SSL2YIL143C GLN4P13188 809 aaKnown RBP8.68□□□□□ -1.02
SSL2YIL143C KSS1P14681 368 aa8.68□□□□□ -1.02
SSL2YIL143C GBP2P25555 427 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
SSL2YIL143C YUR1P26725 428 aa8.68□□□□□ -1.02
SSL2YIL143C STE5P32917 917 aa8.68□□□□□ -1.02
SSL2YIL143C WHI3P34761 661 aaKnown RBP8.68□□□□□ -1.02
SSL2YIL143C RIM4P38741 713 aa8.68□□□□□ -1.02
SSL2YIL143C IES5P40060 125 aa8.68□□□□□ -1.02
SSL2YIL143C YJL055WP47044 245 aa8.68□□□□□ -1.02
SSL2YIL143C ALG11P53954 548 aaKnown RBP8.68□□□□□ -1.02
SSL2YIL143C SLM2P53955 656 aa8.68□□□□□ -1.02
SSL2YIL143C RMI1Q02685 241 aa8.68□□□□□ -1.02
SSL2YIL143C CWC15Q03772 175 aaKnown RBP8.68□□□□□ -1.02
SSL2YIL143C ECM30Q06673 1274 aa8.68□□□□□ -1.02
SSL2YIL143C SYT1Q06836 1226 aa8.68□□□□□ -1.02
SSL2YIL143C YPL191CQ08930 360 aa8.68□□□□□ -1.02
SSL2YIL143C SAM3Q08986 587 aa8.68□□□□□ -1.02
SSL2YIL143C UBX3Q12229 455 aa8.68□□□□□ -1.02
SSL2YIL143C MDY2Q12285 212 aa8.68□□□□□ -1.02
SSL2YIL143C RPN13O13563 156 aa8.68□□□□□ -1.02
SSL2YIL143C UBA1P22515 1024 aaKnown RBP8.68□□□□□ -1.02
SSL2YIL143C YCR090CP25654 182 aaKnown RBP8.68□□□□□ -1.02
SSL2YIL143C SRP101P32916 621 aa8.68□□□□□ -1.02
SSL2YIL143C YJL070CP40361 888 aa8.68□□□□□ -1.02
SSL2YIL143C RPS10BP46784 105 aaKnown RBP8.68□□□□□ -1.02
SSL2YIL143C RRT6P53117 311 aaPredicted RBP8.68□□□□□ -1.02
SSL2YIL143C YGR053CP53234 283 aa8.68□□□□□ -1.02
SSL2YIL143C CEG1Q01159 459 aaPredicted RBP8.68□□□□□ -1.02
SSL2YIL143C CLU1Q03690 1277 aaKnown RBP8.68□□□□□ -1.02
SSL2YIL143C YPR172WQ06608 200 aa8.68□□□□□ -1.02
SSL2YIL143C RPS10AQ08745 105 aaPredicted RBP8.68□□□□□ -1.02
SSL2YIL143C APE1P14904 514 aa8.67□□□□□ -1.02
SSL2YIL143C FAR1P21268 830 aa8.67□□□□□ -1.02
SSL2YIL143C NUP2P32499 720 aa8.67□□□□□ -1.02
SSL2YIL143C FLR1P38124 548 aa8.67□□□□□ -1.02
SSL2YIL143C VMA22P38784 181 aa8.67□□□□□ -1.02
SSL2YIL143C SEC28P40509 296 aaKnown RBP8.67□□□□□ -1.02
SSL2YIL143C GUS1P46655 708 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
SSL2YIL143C IMA1P53051 589 aa8.67□□□□□ -1.02
SSL2YIL143C NRD1P53617 575 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
SSL2YIL143C YNL095CP53932 642 aa8.67□□□□□ -1.02
SSL2YIL143C SRP1Q02821 542 aaKnown RBP8.67□□□□□ -1.02
SSL2YIL143C RSN1Q03516 953 aa8.67□□□□□ -1.02
SSL2YIL143C NTG2Q08214 380 aa8.67□□□□□ -1.02
SSL2YIL143C AVO1Q08236 1176 aa8.67□□□□□ -1.02
SSL2YIL143C YLR125WQ12138 136 aa8.67□□□□□ -1.02
SSL2YIL143C SUC2P00724 532 aa8.66□□□□□ -1.02
SSL2YIL143C REP1P03871 373 aa8.66□□□□□ -1.02
SSL2YIL143C BEM1P29366 551 aa8.66□□□□□ -1.02
SSL2YIL143C RFS1P38234 210 aaKnown RBP8.66□□□□□ -1.02
SSL2YIL143C FAD1P38913 306 aa8.66□□□□□ -1.02
SSL2YIL143C PNT1P38969 423 aa8.66□□□□□ -1.02
SSL2YIL143C GIP4P39732 760 aa8.66□□□□□ -1.02
SSL2YIL143C SYG1P40528 902 aa8.66□□□□□ -1.02
SSL2YIL143C IMA5P40884 581 aa8.66□□□□□ -1.02
SSL2YIL143C OCA1P50946 238 aaPredicted RBP8.66□□□□□ -1.02
SSL2YIL143C AAD4Q07747 329 aa8.66□□□□□ -1.02
SSL2YIL143C MSC6Q08818 692 aaKnown RBP8.66□□□□□ -1.02
SSL2YIL143C HER1Q12276 1246 aa8.66□□□□□ -1.02
SSL2YIL143C MF(ALPHA)1P01149 165 aa8.66□□□□□ -1.02
SSL2YIL143C MET16P18408 261 aaPredicted RBP8.66□□□□□ -1.02
SSL2YIL143C DSS1P39112 969 aa8.66□□□□□ -1.02
SSL2YIL143C YHB1P39676 399 aaKnown RBP8.66□□□□□ -1.02
SSL2YIL143C IRC6P43615 237 aa8.66□□□□□ -1.02
SSL2YIL143C PEX31P53203 462 aa8.66□□□□□ -1.02
SSL2YIL143C RCL1Q08096 367 aaPredicted RBP8.66□□□□□ -1.02
SSL2YIL143C GPR1Q12361 961 aa8.66□□□□□ -1.02
SSL2YIL143C SAS5Q99314 248 aa8.66□□□□□ -1.02
SSL2YIL143C MET17P06106 444 aa8.65□□□□□ -1.02
SSL2YIL143C GLN3P18494 730 aa8.65□□□□□ -1.02
SSL2YIL143C ERG6P25087 383 aaKnown RBP8.65□□□□□ -1.02
SSL2YIL143C RME1P32338 300 aaKnown RBP8.65□□□□□ -1.02
SSL2YIL143C PAH1P32567 862 aa8.65□□□□□ -1.02
SSL2YIL143C COA1P40452 197 aa8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms