RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W YGR237CP50089 785 aa2.51□□□□□ -2.01
PEX4YGR133W VID30P53076 958 aa2.51□□□□□ -2.01
PEX4YGR133W PXR1P53335 271 aaPredicted RBP2.51□□□□□ -2.01
PEX4YGR133W YNL193WP53870 558 aa2.51□□□□□ -2.01
PEX4YGR133W NCS2P53923 493 aaPredicted RBP2.51□□□□□ -2.01
PEX4YGR133W ADA2Q02336 434 aa2.51□□□□□ -2.01
PEX4YGR133W UME1Q03010 460 aa2.51□□□□□ -2.01
PEX4YGR133W NGL3Q03210 505 aa2.51□□□□□ -2.01
PEX4YGR133W EBS1Q03466 884 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W VTI1Q04338 217 aa2.51□□□□□ -2.01
PEX4YGR133W ERV41Q04651 352 aa2.51□□□□□ -2.01
PEX4YGR133W MRD1Q06106 887 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W MMR1Q06324 491 aa2.51□□□□□ -2.01
PEX4YGR133W OPY2Q06810 360 aa2.51□□□□□ -2.01
PEX4YGR133W CMS1Q07897 291 aaKnown RBP2.51□□□□□ -2.01
PEX4YGR133W TAH18Q12181 623 aa2.51□□□□□ -2.01
PEX4YGR133W RRI2Q12348 645 aa2.51□□□□□ -2.01
PEX4YGR133W YOR131CQ12486 218 aa2.51□□□□□ -2.01
PEX4YGR133W YGR161W-CQ3E744 92 aa2.51□□□□□ -2.01
PEX4YGR133W TY1B-AO13527 1196 aaKnown RBP2.5□□□□□ -2.01
PEX4YGR133W HIS4P00815 799 aaKnown RBP2.5□□□□□ -2.01
PEX4YGR133W ARG4P04076 463 aaPredicted RBP2.5□□□□□ -2.01
PEX4YGR133W PIF1P07271 859 aa2.5□□□□□ -2.01
PEX4YGR133W CUP1-1P0CX80 61 aa2.5□□□□□ -2.01
PEX4YGR133W CUP1-2P0CX81 61 aa2.5□□□□□ -2.01
PEX4YGR133W GCD2P12754 651 aaPredicted RBP2.5□□□□□ -2.01
PEX4YGR133W VPS1P21576 704 aaKnown RBP2.5□□□□□ -2.01
PEX4YGR133W PSO2P30620 661 aa2.5□□□□□ -2.01
PEX4YGR133W PUP2P32379 260 aa2.5□□□□□ -2.01
PEX4YGR133W HOG1P32485 435 aa2.5□□□□□ -2.01
PEX4YGR133W UBC6P33296 250 aaPredicted RBP2.5□□□□□ -2.01
PEX4YGR133W TFC3P34111 1160 aa2.5□□□□□ -2.01
PEX4YGR133W LAS1P36146 502 aaPredicted RBP2.5□□□□□ -2.01
PEX4YGR133W MTG2P38860 518 aa2.5□□□□□ -2.01
PEX4YGR133W RRP8P38961 392 aaKnown RBP2.5□□□□□ -2.01
PEX4YGR133W SMC2P38989 1170 aaKnown RBP2.5□□□□□ -2.01
PEX4YGR133W MNN1P39106 762 aa2.5□□□□□ -2.01
PEX4YGR133W YIL001WP40560 513 aa2.5□□□□□ -2.01
PEX4YGR133W IRC7P43623 340 aa2.5□□□□□ -2.01
PEX4YGR133W YJR039WP47107 1121 aa2.5□□□□□ -2.01
PEX4YGR133W SGM1P47166 707 aa2.5□□□□□ -2.01
PEX4YGR133W MAL11P53048 616 aa2.5□□□□□ -2.01
PEX4YGR133W HUL5P53119 910 aa2.5□□□□□ -2.01
PEX4YGR133W ZPR1P53303 486 aaKnown RBP2.5□□□□□ -2.01
PEX4YGR133W RTC4P53850 401 aa2.5□□□□□ -2.01
PEX4YGR133W GTR1Q00582 310 aa2.5□□□□□ -2.01
PEX4YGR133W YML119WQ03208 357 aa2.5□□□□□ -2.01
PEX4YGR133W PRP42Q03776 544 aaKnown RBP2.5□□□□□ -2.01
PEX4YGR133W YMR114CQ04471 368 aaKnown RBP2.5□□□□□ -2.01
PEX4YGR133W SPC24Q04477 213 aa2.5□□□□□ -2.01
PEX4YGR133W SOV1Q04748 898 aa2.5□□□□□ -2.01
PEX4YGR133W YLR001CQ07895 862 aa2.5□□□□□ -2.01
PEX4YGR133W PSR2Q07949 397 aa2.5□□□□□ -2.01
PEX4YGR133W TAF10Q12030 206 aa2.5□□□□□ -2.01
PEX4YGR133W TUS1Q06412 1307 aa2.49□□□□□ -2.01
PEX4YGR133W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
PEX4YGR133W IMG2P25642 146 aaPredicted RBP2.49□□□□□ -2.01
PEX4YGR133W KRE2P27809 442 aa2.49□□□□□ -2.01
PEX4YGR133W HXT1P32465 570 aa2.49□□□□□ -2.01
PEX4YGR133W GCG1P32656 232 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W RPC25P35718 212 aa2.49□□□□□ -2.01
PEX4YGR133W OAF3P36023 863 aa2.49□□□□□ -2.01
PEX4YGR133W HEK2P38199 381 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
PEX4YGR133W CCT2P39076 527 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W VAB2P40003 282 aa2.49□□□□□ -2.01
PEX4YGR133W YIL152WP40455 235 aa2.49□□□□□ -2.01
PEX4YGR133W TES1P41903 349 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W IES1P43579 692 aa2.49□□□□□ -2.01
PEX4YGR133W AIP1P46680 615 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W TMA22P47089 198 aaPredicted RBP2.49□□□□□ -2.01
PEX4YGR133W ART5P53244 586 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W BTN2P53286 410 aa2.49□□□□□ -2.01
PEX4YGR133W YNL144CP53907 740 aa2.49□□□□□ -2.01
PEX4YGR133W BET4Q00618 327 aa2.49□□□□□ -2.01
PEX4YGR133W RPT6Q01939 405 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W TFB2Q02939 513 aa2.49□□□□□ -2.01
PEX4YGR133W FCP1Q03254 732 aa2.49□□□□□ -2.01
PEX4YGR133W RCF1Q03713 159 aa2.49□□□□□ -2.01
PEX4YGR133W URH1Q04179 340 aa2.49□□□□□ -2.01
PEX4YGR133W UTP14Q04500 899 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W FAR8Q05040 523 aa2.49□□□□□ -2.01
PEX4YGR133W RTT103Q05543 409 aa2.49□□□□□ -2.01
PEX4YGR133W YLR177WQ06251 628 aa2.49□□□□□ -2.01
PEX4YGR133W CSR1Q06705 408 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W YOR389WQ08912 624 aa2.49□□□□□ -2.01
PEX4YGR133W DAS2Q12084 232 aa2.49□□□□□ -2.01
PEX4YGR133W DAP1Q12091 152 aa2.49□□□□□ -2.01
PEX4YGR133W CFT2Q12102 859 aaPredicted RBP2.49□□□□□ -2.01
PEX4YGR133W PSF3Q12146 194 aa2.49□□□□□ -2.01
PEX4YGR133W RIO1Q12196 484 aaKnown RBP2.49□□□□□ -2.01
PEX4YGR133W CEX1Q12453 761 aa2.49□□□□□ -2.01
PEX4YGR133W FLO11P08640 1367 aa2.49□□□□□ -2.01
PEX4YGR133W DUR1,2P32528 1835 aaKnown RBP2.48□□□□□ -2.01
PEX4YGR133W OM45P16547 393 aa2.48□□□□□ -2.01
PEX4YGR133W ALG1P16661 449 aa2.48□□□□□ -2.01
PEX4YGR133W YCR051WP25631 222 aa2.48□□□□□ -2.01
PEX4YGR133W NIP1P32497 812 aaKnown RBP2.48□□□□□ -2.01
PEX4YGR133W SSE1P32589 693 aaKnown RBP2.48□□□□□ -2.01
PEX4YGR133W TIM23P32897 222 aa2.48□□□□□ -2.01
PEX4YGR133W OCT1P35999 772 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms