RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	HOL1	P53389	586 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	MEP3	P53390	489 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	ARC35	P53731	342 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	TEP1	P53916	434 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	UBP16	Q02863	499 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	IZH1	Q03419	316 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	EIS1	Q05050	843 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	PDR8	Q06149	701 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	YPL191C	Q08930	360 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	RTK1	Q12100	620 aa	Predicted RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	PDR18	P53756	1333 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	PDR10	P51533	1564 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	LPD1	P09624	499 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	HSC82	P15108	705 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	NCP1	P16603	691 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	HNM1	P19807	563 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	ROX1	P25042	368 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	MSH1	P25846	959 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	MSP1	P28737	362 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	CBF2	P32504	956 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	TGL1	P34163	548 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	APM3	P38153	483 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	PSY4	P38193	441 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	SRP68	P38687	599 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	SWD1	P39706	426 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	SAW1	P39735	261 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	STL1	P39932	569 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	TPA1	P40032	644 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	CTF18	P49956	741 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	MNT2	P53059	558 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	RRT6	P53117	311 aa	Predicted RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	YNL181W	P53878	407 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	HEF3	P53978	1044 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	MDM1	Q01846	1127 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	ARA2	Q04212	335 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	SWF1	Q04629	336 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	TFC6	Q06339	672 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	RAD34	Q06665	692 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	YDR056C	Q12025	205 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	RIM20	Q12033	661 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	DIN7	Q12086	430 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	PSF3	Q12146	194 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	ARP7	Q12406	477 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	ENT1	Q12518	454 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	YBR298C-A	Q8TGK4	73 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	NCB2	Q92317	146 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	SIN3	P22579	1536 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	ESC1	Q03661	1658 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	SNT2	P53127	1403 aa		0.87	□□□□□ -2.27
SEC1	YDR164C	YLR419W	Q06698	1435 aa	Known RBP	0.87	□□□□□ -2.27
SEC1	YDR164C	RAV1	P47104	1357 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	CDC25	P04821	1589 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	TY3B-G	Q99315	1547 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	RPL19A	P0CX82	189 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	RPL19B	P0CX83	189 aa	Predicted RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	MRP7	P12687	371 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	PDA1	P16387	420 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	RPS2	P25443	254 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	YCL049C	P25577	312 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	CDC15	P27636	974 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	CHS3	P29465	1165 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	SIP1	P32578	815 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	MTC7	P32633	139 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	NFU1	P32860	256 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	RPF2	P36160	344 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	YBR138C	P38277	524 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	STT3	P39007	718 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	YER130C	P39959	443 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	PUG1	P40100	303 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	RSM25	P40496	264 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	IML2	P47031	731 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	YDL183C	P48569	320 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	PIL1	P53252	339 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	CPR6	P53691	371 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	YNR071C	P53757	342 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	YNL092W	P53934	400 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	ADE16	P54113	591 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	GIR2	Q03768	265 aa	Predicted RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	YDR415C	Q04033	374 aa	Predicted RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	YML053C	Q04978	212 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	BLS1	Q06071	122 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	THI3	Q07471	609 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	LCB4	Q12246	624 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	DBP10	Q12389	995 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	SNU66	Q12420	587 aa	Predicted RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	MLP2	P40457	1679 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	MMS1	Q06211	1407 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	URA3	P03962	267 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	RPP0	P05317	312 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	SNF1	P06782	633 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	MTF2	P10849	440 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	FRS2	P15625	503 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	PET123	P17558	318 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	OSM1	P21375	501 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	SIR1	P21691	654 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	ARG1	P22768	420 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	MCM3	P24279	971 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	SWI4	P25302	1093 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	GFD2	P25370	566 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	RDS1	P25611	832 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 46 ms