RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HPR1	YDR138W	DLT1	Q04216	342 aa		4.28	□□□□□ -1.72
HPR1	YDR138W	RQC1	Q05468	723 aa	Known RBP	4.28	□□□□□ -1.72
HPR1	YDR138W	TMA10	Q06177	86 aa		4.28	□□□□□ -1.72
HPR1	YDR138W	ATG29	Q12092	213 aa		4.28	□□□□□ -1.72
HPR1	YDR138W	CEX1	Q12453	761 aa		4.28	□□□□□ -1.72
HPR1	YDR138W	AFI1	Q99222	893 aa		4.28	□□□□□ -1.72
HPR1	YDR138W	SES1	P07284	462 aa	Known RBP	4.27	□□□□□ -1.73
HPR1	YDR138W	MRP13	P12686	339 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	CLB3	P24870	427 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	ELO2	P25358	347 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	HXT3	P32466	567 aa	Known RBP	4.27	□□□□□ -1.73
HPR1	YDR138W	MRE11	P32829	692 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	HES1	P35843	434 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	NTR2	P36118	322 aa	Predicted RBP	4.27	□□□□□ -1.73
HPR1	YDR138W	ADH5	P38113	351 aa	Known RBP	4.27	□□□□□ -1.73
HPR1	YDR138W	RPS7B	P48164	190 aa	Known RBP	4.27	□□□□□ -1.73
HPR1	YDR138W	IMD4	P50094	524 aa	Known RBP	4.27	□□□□□ -1.73
HPR1	YDR138W	PRP43	P53131	767 aa	Known RBP	4.27	□□□□□ -1.73
HPR1	YDR138W	YGR151C	P53287	111 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	VTI1	Q04338	217 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	TAP42	Q04372	366 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	YPR172W	Q06608	200 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	YDL086W	Q07505	273 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	MED7	Q08278	222 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	RPN5	Q12250	445 aa	Known RBP	4.27	□□□□□ -1.73
HPR1	YDR138W	SKS1	Q12505	502 aa		4.27	□□□□□ -1.73
HPR1	YDR138W	SUP35	P05453	685 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
HPR1	YDR138W	DAP2	P18962	818 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	CPR2	P23285	205 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	YIH1	P25637	258 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	LAS1	P36146	502 aa	Predicted RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	POL12	P38121	705 aa	Predicted RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	SIF2	P38262	535 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	KSP1	P38691	1029 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	FMP52	P40008	231 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	TOF1	P53840	1238 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	SWA2	Q06677	668 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	LYS21	Q12122	440 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	RKI1	Q12189	258 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	GLK1	P17709	500 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	PDE1	P22434	369 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	NTH1	P32356	751 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	KES1	P35844	434 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	YNG2	P38806	282 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
HPR1	YDR138W	YJL055W	P47044	245 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	STR3	P53101	465 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	YGR066C	P53242	292 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	ADE16	P54113	591 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	MAK10	Q02197	733 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	SGT2	Q12118	346 aa	Known RBP	4.26	□□□□□ -1.73
HPR1	YDR138W	LCB4	Q12246	624 aa		4.26	□□□□□ -1.73
HPR1	YDR138W	SWC3	P31376	625 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	GDA1	P32621	518 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	HIS7	P33734	552 aa	Known RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	CMC1	P36064	111 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	CCL1	P37366	393 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	YHR218W	P38899	603 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	SER3	P40054	469 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	CTR1	P49573	406 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	KTR5	P53966	522 aa	Predicted RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	TIM11	P81449	96 aa	Predicted RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	CDA2	Q06703	312 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	PML1	Q07930	204 aa	Predicted RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	PCL8	Q08966	492 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	TPK2	P06245	380 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	KRS1	P15180	591 aa	Known RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
HPR1	YDR138W	APE3	P37302	537 aa	Known RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	AIM3	P38266	947 aa	Known RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	FYV8	P46949	817 aa	Known RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	PRO2	P54885	456 aa	Known RBP	4.25	□□□□□ -1.73
HPR1	YDR138W	VTC3	Q02725	835 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	MFM1	Q02783	413 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
HPR1	YDR138W	UAF30	Q08747	228 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	PSY3	Q12318	242 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	SGS1	P35187	1447 aa		4.25	□□□□□ -1.73
HPR1	YDR138W	PRD1	P25375	712 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	RPL5	P26321	297 aa	Known RBP	4.24	□□□□□ -1.73
HPR1	YDR138W	RFC1	P38630	861 aa	Known RBP	4.24	□□□□□ -1.73
HPR1	YDR138W	MSE1	P48525	536 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	CUL3	P53202	744 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	TWF1	P53250	332 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	RIA1	P53893	1110 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	RSM28	Q03430	361 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	YDR239C	Q03780	787 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	ARG7	Q04728	441 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	APC5	Q08683	685 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	AVL9	Q12500	764 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	LAM4	P38800	1345 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	CHO2	P05374	869 aa	Known RBP	4.24	□□□□□ -1.73
HPR1	YDR138W	VMA2	P16140	517 aa	Known RBP	4.24	□□□□□ -1.73
HPR1	YDR138W	TRX1	P22217	103 aa	Known RBP	4.24	□□□□□ -1.73
HPR1	YDR138W	DEP1	P31385	405 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	RML2	P32611	393 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	AAP1	P37898	856 aa	Known RBP	4.24	□□□□□ -1.73
HPR1	YDR138W	RRT2	P38332	387 aa		4.24	□□□□□ -1.73
HPR1	YDR138W	APT1	P49435	187 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms