RNA–Protein interactions for RNA: YDR001C

NTH1, Transcript of Neutral trehalase, degrades trehalose, yeast

Gene NTH1, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTH1	YDR001C	RSM28	Q03430	361 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	SXM1	Q04175	944 aa	Known RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	CSI1	Q04368	295 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	AIM6	Q07716	390 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	GPN2	Q08726	347 aa	Predicted RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	YDR056C	Q12025	205 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	CDC8	P00572	216 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	REP1	P03871	373 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	RPS19A	P07280	144 aa	Known RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	RPS19B	P07281	144 aa	Predicted RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	CTS1	P29029	562 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	PRE2	P30656	287 aa	Known RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	VPH2	P32341	215 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	CBF2	P32504	956 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	COY1	P34237	679 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	KES1	P35844	434 aa	Known RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	YKT6	P36015	200 aa	Known RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	FES1	P38260	290 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	YBR242W	P38331	238 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	YHR097C	P38809	366 aa	Known RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	YJL193W	P39542	402 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	PSF2	P40359	213 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	SDS3	P40505	327 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	LAM5	P43560	674 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	IMA1	P53051	589 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	HOS2	P53096	452 aa	Predicted RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	ESBP6	P53918	673 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	TSR2	Q06672	205 aa	Known RBP	4.14	□□□□□ -1.75
NTH1	YDR001C	AIM39	Q08223	395 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	VIK1	Q12045	647 aa		4.14	□□□□□ -1.75
NTH1	YDR001C	PPR1	P07272	904 aa	Predicted RBP	4.13	□□□□□ -1.75
NTH1	YDR001C	RPB2	P08518	1224 aa	Known RBP	4.13	□□□□□ -1.75
NTH1	YDR001C	SSC1	P0CS90	654 aa	Known RBP	4.13	□□□□□ -1.75
NTH1	YDR001C	MRPL7	P36519	292 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	PPS1	P38148	807 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	UBP13	P38187	747 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
NTH1	YDR001C	RFT1	P38206	574 aa	Predicted RBP	4.13	□□□□□ -1.75
NTH1	YDR001C	MNT3	P40549	630 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	VTC2	P43585	828 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	TEL2	P53038	688 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	ZPR1	P53303	486 aa	Known RBP	4.13	□□□□□ -1.75
NTH1	YDR001C	EFR3	Q03653	782 aa	Known RBP	4.13	□□□□□ -1.75
NTH1	YDR001C	TAP42	Q04372	366 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	PSK2	Q08217	1101 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	SCM3	Q12334	223 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	RRI2	Q12348	645 aa		4.13	□□□□□ -1.75
NTH1	YDR001C	VPS1	P21576	704 aa	Known RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	RER1	P25560	188 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	RPS7A	P26786	190 aa	Known RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	NTH1	P32356	751 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	NIP1	P32497	812 aa	Known RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	ELF1	P36053	145 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	MAL33	P38157	468 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	FZO1	P38297	855 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	SUL1	P38359	859 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	SMF1	P38925	575 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	STB2	P46679	850 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	VID22	Q05934	901 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	ATG17	Q06410	417 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	RIX7	Q07844	837 aa	Known RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	TAF10	Q12030	206 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	USV1	Q12132	391 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	HIS3	P06633	220 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	CDC31	P06704	161 aa	Known RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	RSR1	P13856	272 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	GUK1	P15454	187 aa	Known RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	BET2	P20133	325 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	BUD23	P25627	275 aa	Predicted RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	FUB1	P25659	250 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	ARP2	P32381	391 aa	Known RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	AXL2	P38928	823 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	CAB2	P40506	365 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	SPO22	P40511	975 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	SNF12	P53628	566 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	DML1	Q03652	475 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	GIR2	Q03768	265 aa	Predicted RBP	4.12	□□□□□ -1.75
NTH1	YDR001C	HOF1	Q05080	669 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	OPY2	Q06810	360 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	YOL073C	Q08232	322 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	BCK1	Q01389	1478 aa		4.12	□□□□□ -1.75
NTH1	YDR001C	SEC12	P11655	471 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	YJU2	P28320	278 aa	Predicted RBP	4.11	□□□□□ -1.75
NTH1	YDR001C	CHS3	P29465	1165 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	PAP1	P29468	568 aa	Known RBP	4.11	□□□□□ -1.75
NTH1	YDR001C	GCD7	P32502	381 aa	Predicted RBP	4.11	□□□□□ -1.75
NTH1	YDR001C	OCT1	P35999	772 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	AAP1	P37898	856 aa	Known RBP	4.11	□□□□□ -1.75
NTH1	YDR001C	YGR266W	P53326	701 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	BNI5	P53890	448 aa	Known RBP	4.11	□□□□□ -1.75
NTH1	YDR001C	KIN4	Q01919	800 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	MUB1	Q03162	620 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	USA1	Q03714	838 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	VPS64	Q03944	604 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	PPM1	Q04081	328 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	HEL2	Q05580	639 aa	Known RBP	4.11	□□□□□ -1.75
NTH1	YDR001C	SUL2	Q12325	893 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	APC1	P53886	1748 aa		4.11	□□□□□ -1.75
NTH1	YDR001C	LPD1	P09624	499 aa	Known RBP	4.11	□□□□□ -1.75
NTH1	YDR001C	SNA3	P14359	133 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms