RNA–Protein interactions for RNA: YDR001C

NTH1, Transcript of Neutral trehalase, degrades trehalose, yeastyeast

Gene NTH1, Length 2,256 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NTH1YDR001C DRS1P32892 752 aaKnown RBP10.74□□□□□ -0.69
NTH1YDR001C MTC1P47018 478 aaKnown RBP10.36□□□□□ -0.75
NTH1YDR001C BFR2Q06631 534 aaKnown RBP9.42□□□□□ -0.9
NTH1YDR001C TFA1P36100 482 aa9.13□□□□□ -0.95
NTH1YDR001C AVT3P36062 692 aa9.05□□□□□ -0.96
NTH1YDR001C DIP2Q12220 943 aaPredicted RBP9.04□□□□□ -0.96
NTH1YDR001C RSE1Q04693 1361 aaKnown RBP8.39□□□□□ -1.07
NTH1YDR001C ISW2Q08773 1120 aa8.31□□□□□ -1.08
NTH1YDR001C RPG1P38249 964 aaKnown RBP8.23□□□□□ -1.09
NTH1YDR001C PRI1P10363 409 aa8.14□□□□□ -1.11
NTH1YDR001C FAP1P53971 965 aa8.08□□□□□ -1.12
NTH1YDR001C RPL17AP05740 184 aaKnown RBP8.07□□□□□ -1.12
NTH1YDR001C RPL17BP46990 184 aaKnown RBP8.07□□□□□ -1.12
NTH1YDR001C RQC2Q12532 1038 aaKnown RBP7.96□□□□□ -1.13
NTH1YDR001C REB1P21538 810 aa7.92□□□□□ -1.14
NTH1YDR001C AAD16Q02895 342 aa7.91□□□□□ -1.14
NTH1YDR001C SPT21P35209 758 aa7.86□□□□□ -1.15
NTH1YDR001C RIM101P33400 625 aa7.81□□□□□ -1.16
NTH1YDR001C TSR3Q12094 313 aaKnown RBP7.75□□□□□ -1.17
NTH1YDR001C PTP3P40048 928 aa7.74□□□□□ -1.17
NTH1YDR001C DMA1P38823 416 aa7.66□□□□□ -1.18
NTH1YDR001C OXP1P28273 1286 aa7.61□□□□□ -1.19
NTH1YDR001C SSP1P38871 571 aa7.59□□□□□ -1.19
NTH1YDR001C PRY3P47033 881 aa7.55□□□□□ -1.2
NTH1YDR001C YKR023WP36119 530 aaKnown RBP7.54□□□□□ -1.2
NTH1YDR001C YAH1Q12184 172 aaKnown RBP7.48□□□□□ -1.21
NTH1YDR001C YLR271WQ06152 274 aa7.45□□□□□ -1.22
NTH1YDR001C YIL055CP40523 627 aaKnown RBP7.41□□□□□ -1.22
NTH1YDR001C MRPL32P25348 183 aa7.38□□□□□ -1.23
NTH1YDR001C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
NTH1YDR001C HOP09932 586 aa7.36□□□□□ -1.23
NTH1YDR001C TFC8Q12308 588 aa7.36□□□□□ -1.23
NTH1YDR001C DCD1P06773 312 aa7.33□□□□□ -1.24
NTH1YDR001C RSM7P47150 247 aa7.32□□□□□ -1.24
NTH1YDR001C MGA2P40578 1113 aa7.29□□□□□ -1.24
NTH1YDR001C CDC27P38042 758 aa7.29□□□□□ -1.24
NTH1YDR001C YCK3P39962 524 aa7.27□□□□□ -1.25
NTH1YDR001C CST9Q06032 482 aa7.25□□□□□ -1.25
NTH1YDR001C PSD2P53037 1138 aaKnown RBP7.21□□□□□ -1.26
NTH1YDR001C AI2P03876 854 aa7.18□□□□□ -1.26
NTH1YDR001C BCH2P36122 765 aa7.18□□□□□ -1.26
NTH1YDR001C SAS10Q12136 610 aaPredicted RBP7.16□□□□□ -1.26
NTH1YDR001C HAA1Q12753 694 aaKnown RBP7.12□□□□□ -1.27
NTH1YDR001C LEO1P38439 464 aa7.11□□□□□ -1.27
NTH1YDR001C BBC1P47068 1157 aa7.07□□□□□ -1.28
NTH1YDR001C TAF7Q05021 590 aa7.06□□□□□ -1.28
NTH1YDR001C EPS1P40557 701 aa7.05□□□□□ -1.28
NTH1YDR001C RAM2P29703 316 aa7.01□□□□□ -1.29
NTH1YDR001C BDF1P35817 686 aa7.01□□□□□ -1.29
NTH1YDR001C LEU3P08638 886 aa7□□□□□ -1.29
NTH1YDR001C RCR1P38212 213 aa6.99□□□□□ -1.29
NTH1YDR001C MRM1P25270 412 aa6.98□□□□□ -1.29
NTH1YDR001C SCY1P53009 804 aa6.95□□□□□ -1.3
NTH1YDR001C SET1P38827 1080 aaKnown RBP6.92□□□□□ -1.3
NTH1YDR001C MAP2P38174 421 aaKnown RBP6.92□□□□□ -1.3
NTH1YDR001C RTG3P38165 486 aa6.9□□□□□ -1.31
NTH1YDR001C UBP10P53874 792 aaPredicted RBP6.88□□□□□ -1.31
NTH1YDR001C YPR148CQ06523 435 aa6.85□□□□□ -1.31
NTH1YDR001C MAK11P20484 414 aaKnown RBP6.85□□□□□ -1.31
NTH1YDR001C VPS29P38759 282 aa6.83□□□□□ -1.32
NTH1YDR001C VPS70P47161 811 aa6.82□□□□□ -1.32
NTH1YDR001C YGL015CP33199 130 aa6.8□□□□□ -1.32
NTH1YDR001C CKB1P43639 278 aa6.79□□□□□ -1.32
NTH1YDR001C SPB4P25808 606 aaPredicted RBP6.78□□□□□ -1.32
NTH1YDR001C SLX5P32828 619 aaKnown RBP6.78□□□□□ -1.32
NTH1YDR001C IFH1P39520 1085 aa6.78□□□□□ -1.32
NTH1YDR001C RPN1P38764 993 aaKnown RBP6.77□□□□□ -1.33
NTH1YDR001C COQ8P27697 501 aa6.75□□□□□ -1.33
NTH1YDR001C STS1P38637 319 aa6.73□□□□□ -1.33
NTH1YDR001C YMR1P47147 688 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
NTH1YDR001C DSF2P38213 736 aa6.7□□□□□ -1.34
NTH1YDR001C EDS1P38073 919 aa6.69□□□□□ -1.34
NTH1YDR001C DBP1P24784 617 aaKnown RBP6.68□□□□□ -1.34
NTH1YDR001C DMA2P53924 522 aa6.68□□□□□ -1.34
NTH1YDR001C PBS2P08018 668 aa6.67□□□□□ -1.34
NTH1YDR001C MIF2P35201 549 aa6.67□□□□□ -1.34
NTH1YDR001C YFR006WP43590 535 aa6.67□□□□□ -1.34
NTH1YDR001C NOP53Q12080 455 aaKnown RBP6.67□□□□□ -1.34
NTH1YDR001C YOR238WQ08634 303 aa6.63□□□□□ -1.35
NTH1YDR001C PTC3P34221 468 aaKnown RBP6.6□□□□□ -1.35
NTH1YDR001C NSR1P27476 414 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
NTH1YDR001C REF2P42073 533 aaPredicted RBP6.59□□□□□ -1.35
NTH1YDR001C PIB1Q06651 286 aa6.57□□□□□ -1.36
NTH1YDR001C TIF4632P39936 914 aaKnown RBP6.57□□□□□ -1.36
NTH1YDR001C YNR021WP53723 404 aaKnown RBP6.57□□□□□ -1.36
NTH1YDR001C MAM3Q12296 706 aa6.57□□□□□ -1.36
NTH1YDR001C NUP42P49686 430 aaKnown RBP6.56□□□□□ -1.36
NTH1YDR001C DIT2P21595 489 aa6.55□□□□□ -1.36
NTH1YDR001C TGL3P40308 642 aa6.55□□□□□ -1.36
NTH1YDR001C YAP5P40574 245 aa6.55□□□□□ -1.36
NTH1YDR001C KIN1P13185 1064 aa6.54□□□□□ -1.36
NTH1YDR001C IES2P40154 320 aa6.54□□□□□ -1.36
NTH1YDR001C COX6P00427 148 aa6.53□□□□□ -1.36
NTH1YDR001C ABP1P15891 592 aaKnown RBP6.53□□□□□ -1.36
NTH1YDR001C GLC3P32775 704 aa6.53□□□□□ -1.36
NTH1YDR001C VMA1P17255 1071 aaKnown RBP6.53□□□□□ -1.36
NTH1YDR001C AIM7Q12156 149 aa6.51□□□□□ -1.37
NTH1YDR001C MAK21Q12176 1025 aaKnown RBP6.5□□□□□ -1.37
NTH1YDR001C UBP14P38237 781 aaKnown RBP6.5□□□□□ -1.37
NTH1YDR001C YDR090CQ03193 310 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms