RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	FSH1	P38777	243 aa	Known RBP	4.89	□□□□□ -1.63
RPC53	YDL150W	LNP1	P38878	278 aa		4.89	□□□□□ -1.63
RPC53	YDL150W	PUG1	P40100	303 aa		4.89	□□□□□ -1.63
RPC53	YDL150W	TDA10	P42938	290 aa		4.89	□□□□□ -1.63
RPC53	YDL150W	PGA3	Q12746	312 aa	Known RBP	4.89	□□□□□ -1.63
RPC53	YDL150W	FKS1	P38631	1876 aa	Known RBP	4.89	□□□□□ -1.63
RPC53	YDL150W	COQ1	P18900	473 aa		4.88	□□□□□ -1.63
RPC53	YDL150W	RNR3	P21672	869 aa	Known RBP	4.88	□□□□□ -1.63
RPC53	YDL150W	CLB4	P24871	460 aa		4.88	□□□□□ -1.63
RPC53	YDL150W	OPT1	P40897	799 aa		4.88	□□□□□ -1.63
RPC53	YDL150W	MRPL13	Q02204	264 aa		4.88	□□□□□ -1.63
RPC53	YDL150W	CIA1	Q05583	330 aa		4.88	□□□□□ -1.63
RPC53	YDL150W	BSP1	Q06604	576 aa		4.88	□□□□□ -1.63
RPC53	YDL150W	PCL8	Q08966	492 aa		4.88	□□□□□ -1.63
RPC53	YDL150W	ADE3	P07245	946 aa	Known RBP	4.87	□□□□□ -1.63
RPC53	YDL150W	RNR2	P09938	399 aa	Known RBP	4.87	□□□□□ -1.63
RPC53	YDL150W	MTF2	P10849	440 aa		4.87	□□□□□ -1.63
RPC53	YDL150W	IMP2'	P32351	346 aa		4.87	□□□□□ -1.63
RPC53	YDL150W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RPC53	YDL150W	AFG3	P39925	761 aa		4.87	□□□□□ -1.63
RPC53	YDL150W	ESF2	P53743	316 aa	Known RBP	4.87	□□□□□ -1.63
RPC53	YDL150W	ERG13	P54839	491 aa	Known RBP	4.87	□□□□□ -1.63
RPC53	YDL150W	RSC9	Q03124	581 aa		4.87	□□□□□ -1.63
RPC53	YDL150W	TRS130	Q03660	1102 aa		4.87	□□□□□ -1.63
RPC53	YDL150W	MRD1	Q06106	887 aa	Known RBP	4.87	□□□□□ -1.63
RPC53	YDL150W	SPN1	Q06505	410 aa	Predicted RBP	4.87	□□□□□ -1.63
RPC53	YDL150W	TUS1	Q06412	1307 aa		4.87	□□□□□ -1.63
RPC53	YDL150W	CHO2	P05374	869 aa	Known RBP	4.86	□□□□□ -1.63
RPC53	YDL150W	HIP1	P06775	603 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	KGD2	P19262	463 aa	Predicted RBP	4.86	□□□□□ -1.63
RPC53	YDL150W	PSY4	P38193	441 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	RTS1	P38903	757 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	ARB1	P40024	610 aa	Known RBP	4.86	□□□□□ -1.63
RPC53	YDL150W	LAS21	P40367	830 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	YIR014W	P40570	242 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	SMK1	P41808	388 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	SNO3	P43544	222 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	IML2	P47031	731 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	YJL043W	P47053	257 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	SCS3	P53012	380 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	ARC35	P53731	342 aa	Known RBP	4.86	□□□□□ -1.63
RPC53	YDL150W	KEL3	Q08979	651 aa	Predicted RBP	4.86	□□□□□ -1.63
RPC53	YDL150W	RDL1	Q12305	139 aa	Known RBP	4.86	□□□□□ -1.63
RPC53	YDL150W	YLR111W	Q12528	110 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	YDR034W-B	Q6Q5X2	51 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	ECM29	P38737	1868 aa		4.86	□□□□□ -1.63
RPC53	YDL150W	NUC1	P08466	329 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	PET122	P10355	254 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	YPK1	P12688	680 aa	Known RBP	4.85	□□□□□ -1.63
RPC53	YDL150W	VMA2	P16140	517 aa	Known RBP	4.85	□□□□□ -1.63
RPC53	YDL150W	NCP1	P16603	691 aa	Known RBP	4.85	□□□□□ -1.63
RPC53	YDL150W	PDE1	P22434	369 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	SWI4	P25302	1093 aa	Known RBP	4.85	□□□□□ -1.63
RPC53	YDL150W	PEP3	P27801	918 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	MRPL9	P31334	269 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	ARP2	P32381	391 aa	Known RBP	4.85	□□□□□ -1.63
RPC53	YDL150W	VID27	P40157	782 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	ERR3	P42222	437 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	ARP5	P53946	755 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	PRS5	Q12265	496 aa	Known RBP	4.85	□□□□□ -1.63
RPC53	YDL150W	YBR255C-A	Q3E776	120 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	YER175W-A	Q8TGU4	54 aa		4.85	□□□□□ -1.63
RPC53	YDL150W	PCT1	P13259	424 aa		4.84	□□□□□ -1.63
RPC53	YDL150W	UBC1	P21734	215 aa	Known RBP	4.84	□□□□□ -1.63
RPC53	YDL150W	YJU2	P28320	278 aa	Predicted RBP	4.84	□□□□□ -1.63
RPC53	YDL150W	YBR138C	P38277	524 aa		4.84	□□□□□ -1.63
RPC53	YDL150W	YHR131C	P38835	850 aa		4.84	□□□□□ -1.63
RPC53	YDL150W	SPO22	P40511	975 aa		4.84	□□□□□ -1.63
RPC53	YDL150W	SKP2	P42843	763 aa		4.84	□□□□□ -1.63
RPC53	YDL150W	IDP3	P53982	420 aa	Known RBP	4.84	□□□□□ -1.63
RPC53	YDL150W	SUB1	P54000	292 aa	Known RBP	4.84	□□□□□ -1.63
RPC53	YDL150W	GTR1	Q00582	310 aa		4.84	□□□□□ -1.63
RPC53	YDL150W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RPC53	YDL150W	RAD61	Q99359	647 aa		4.84	□□□□□ -1.63
RPC53	YDL150W	ANP1	P32629	500 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	RGT1	P32862	1170 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	CST26	P38226	397 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	EXO84	P38261	753 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	VPS8	P39702	1274 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	SAE2	P46946	345 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	WAR1	Q03631	944 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	VPS20	Q04272	221 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	TDA9	Q04545	1251 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	CSR1	Q06705	408 aa	Known RBP	4.83	□□□□□ -1.64
RPC53	YDL150W	NUM1	Q00402	2748 aa		4.83	□□□□□ -1.64
RPC53	YDL150W	KRS1	P15180	591 aa	Known RBP	4.82	□□□□□ -1.64
RPC53	YDL150W	PRE8	P23639	250 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	RAD16	P31244	790 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	PRO3	P32263	286 aa	Known RBP	4.82	□□□□□ -1.64
RPC53	YDL150W	SSH4	P32343	579 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	NUP120	P35729	1037 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	SPC97	P38863	823 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	STB2	P46679	850 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	COG2	P53271	262 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	YML131W	Q03102	365 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	TFC6	Q06339	672 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	SUL2	Q12325	893 aa		4.82	□□□□□ -1.64
RPC53	YDL150W	MYO3	P36006	1272 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	OPY1	P38271	328 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	TOM71	P38825	639 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms