RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	ZIP1	P31111	875 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	DAL3	P32459	195 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	SRP101	P32916	621 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	GPT2	P36148	743 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	MRPL17	P36528	281 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	YHL012W	P38709	493 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	AXL2	P38928	823 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	GDH3	P39708	457 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	SIP5	P40210	489 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	ATF1	P40353	525 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	RAI1	P53063	387 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	AIM14	P53109	570 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	PEF1	P53238	335 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	RCF2	P53721	224 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	PDR16	P53860	351 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	KAP120	Q02932	1032 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	FIN1	Q03898	291 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	RVB1	Q03940	463 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	YML082W	Q04533	649 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	ISR1	Q06098	443 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	HAL9	Q12180	1030 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	NTO1	Q12311	748 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	ISA2	Q12425	185 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	RTN2	Q12443	393 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	CMR1	Q12510	522 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	TUS1	Q06412	1307 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	MSS116	P15424	664 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	MRM1	P25270	412 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	ADY2	P25613	283 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	YCR016W	P25617	290 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	SYP1	P25623	870 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	HEM12	P32347	362 aa	Predicted RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	RPC25	P35718	212 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	NCL1	P38205	684 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	EGD2	P38879	174 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	RPN10	P38886	268 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	PCF11	P39081	626 aa	Predicted RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	SMX2	P40204	77 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	ERG10	P41338	398 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	THI6	P41835	540 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	SLX9	P53251	210 aa	Predicted RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	CPR6	P53691	371 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	ARC35	P53731	342 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	CLU1	Q03690	1277 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	EMI2	Q04409	500 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	YPR084W	Q06821	456 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	SYO1	Q07395	620 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	YDL114W	Q07530	308 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	CWC2	Q12046	339 aa	Predicted RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	TIP41	Q12199	356 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	RSF2	P46974	1380 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	NMT1	P14743	455 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	ARO3	P14843	370 aa	Known RBP	5.07	□□□□□ -1.6
TUP1	YCR084C	SEC18	P18759	758 aa	Known RBP	5.07	□□□□□ -1.6
TUP1	YCR084C	DAP2	P18962	818 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	COX11	P19516	300 aa	Known RBP	5.07	□□□□□ -1.6
TUP1	YCR084C	AEP2	P22136	580 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	ESS1	P22696	170 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	RPS7A	P26786	190 aa	Known RBP	5.07	□□□□□ -1.6
TUP1	YCR084C	TRK2	P28584	889 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	SUA5	P32579	426 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	YKU70	P32807	602 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	YBL055C	P34220	418 aa	Predicted RBP	5.07	□□□□□ -1.6
TUP1	YCR084C	CPR5	P35176	225 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	RMA1	P36001	430 aa	Known RBP	5.07	□□□□□ -1.6
TUP1	YCR084C	VMA22	P38784	181 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	STT3	P39007	718 aa	Known RBP	5.07	□□□□□ -1.6
TUP1	YCR084C	SSO2	P39926	295 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	ALG5	P40350	334 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	EOS1	P53938	366 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	YDR444W	Q04093	687 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	CSC1	Q06538	782 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	FRA1	Q07825	749 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
TUP1	YCR084C	YOS9	Q99220	542 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	SEY1	Q99287	776 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	POM152	P39685	1337 aa		5.07	□□□□□ -1.6
TUP1	YCR084C	TEC1	P18412	486 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	MAE1	P36013	669 aa	Known RBP	5.06	□□□□□ -1.6
TUP1	YCR084C	SHM2	P37291	469 aa	Known RBP	5.06	□□□□□ -1.6
TUP1	YCR084C	PIG2	P40187	538 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	JLP2	P40206	208 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	QDR2	P40474	542 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	RPC17	P47076	161 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	YNL040W	P53960	456 aa	Predicted RBP	5.06	□□□□□ -1.6
TUP1	YCR084C	ARP4	P80428	489 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	YDC1	Q02896	317 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	DFG5	Q05031	458 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	REX4	Q08237	289 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	HER1	Q12276	1246 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	YOL114C	Q12322	202 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	ISN1	Q99312	450 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	GAL7	P08431	366 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	YAK1	P14680	807 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	CNA1	P23287	553 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	GCS1	P35197	352 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	MCD4	P36051	919 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	CAF4	P36130	643 aa		5.06	□□□□□ -1.6
TUP1	YCR084C	YKR078W	P36158	585 aa	Known RBP	5.06	□□□□□ -1.6
TUP1	YCR084C	PGM2	P37012	569 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 70 ms