RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PDGFDQ9GZP0 370 aaPredicted RBP15.81■□□□□ 0.12
TRIM4-201ENST00000349062 CYTH3O43739 400 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 MYL5Q02045 173 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 WWC2Q6AWC2 1192 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 GPIHBP1Q8IV16 184 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 BLIDQ8IZY5 108 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 CERS5Q8N5B7 392 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 SMTNL1A8MU46 457 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 PARP1P09874 1014 aaKnown RBP15.8■□□□□ 0.12
TRIM4-201ENST00000349062 ZFPM1Q8IX07 1006 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 TRERF1Q96PN7 1200 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
TRIM4-201ENST00000349062 WNK3Q9BYP7 1800 aa15.8■□□□□ 0.12
TRIM4-201ENST00000349062 AKR1B1P15121 316 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 SFPQP23246 707 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRIM4-201ENST00000349062 KCTD1Q719H9 257 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 C2CD5Q86YS7 1000 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 GJA10Q969M2 543 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 TMEM260Q9NX78 707 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 SEC63Q9UGP8 760 aaKnown RBP15.79■□□□□ 0.12
TRIM4-201ENST00000349062 HPSEQ9Y251 543 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 SRPRBQ9Y5M8 271 aaKnown RBP15.79■□□□□ 0.12
TRIM4-201ENST00000349062 ZBTB22O15209 634 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 MARCH6O60337 910 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 EN1Q05925 392 aaPredicted RBP15.79■□□□□ 0.12
TRIM4-201ENST00000349062 SOGA3Q5TF21 947 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 TRIM34Q9BYJ4 488 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 GTPBP4Q9BZE4 634 aaKnown RBP15.79■□□□□ 0.12
TRIM4-201ENST00000349062 SPTLC3Q9NUV7 552 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 ADRA2BP18089 450 aa15.79■□□□□ 0.12
TRIM4-201ENST00000349062 CCNT1O60563 726 aaKnown RBP15.78■□□□□ 0.12
TRIM4-201ENST00000349062 CAVIN2O95810 425 aa15.78■□□□□ 0.12
TRIM4-201ENST00000349062 PFKFB3Q16875 520 aaPredicted RBP15.78■□□□□ 0.12
TRIM4-201ENST00000349062 LRP5O75197 1615 aa15.78■□□□□ 0.12
TRIM4-201ENST00000349062 TAL1P17542 331 aaPredicted RBP15.78■□□□□ 0.12
TRIM4-201ENST00000349062 CCT6AP40227 531 aaKnown RBP15.78■□□□□ 0.12
TRIM4-201ENST00000349062 TTBK2Q6IQ55 1244 aa15.78■□□□□ 0.12
TRIM4-201ENST00000349062 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.78■□□□□ 0.12
TRIM4-201ENST00000349062 MAD2L2Q9UI95 211 aa15.78■□□□□ 0.12
TRIM4-201ENST00000349062 SMCO2A6NFE2 343 aa15.78■□□□□ 0.12
TRIM4-201ENST00000349062 SLC35G1Q2M3R5 365 aa15.78■□□□□ 0.12
TRIM4-201ENST00000349062 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
TRIM4-201ENST00000349062 TPM3P06753 285 aa15.77■□□□□ 0.12
TRIM4-201ENST00000349062 ADKP55263 362 aaKnown RBP15.77■□□□□ 0.12
TRIM4-201ENST00000349062 RBM6P78332 1123 aaKnown RBP15.77■□□□□ 0.12
TRIM4-201ENST00000349062 NCAPHQ15003 741 aa15.77■□□□□ 0.12
TRIM4-201ENST00000349062 SBK1Q52WX2 424 aa15.77■□□□□ 0.12
TRIM4-201ENST00000349062 UTP14CQ5TAP6 766 aaKnown RBP15.77■□□□□ 0.12
TRIM4-201ENST00000349062 RRAGBQ5VZM2 374 aa15.77■□□□□ 0.12
TRIM4-201ENST00000349062 NLGN1Q8N2Q7 840 aa15.77■□□□□ 0.12
TRIM4-201ENST00000349062 TMEM60Q9H2L4 133 aa15.77■□□□□ 0.12
TRIM4-201ENST00000349062 CHD4Q14839 1912 aa15.77■□□□□ 0.11
TRIM4-201ENST00000349062 GDF11O95390 407 aa15.77■□□□□ 0.11
TRIM4-201ENST00000349062 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.11
TRIM4-201ENST00000349062 C4AP0C0L4 1744 aa15.77■□□□□ 0.11
TRIM4-201ENST00000349062 SRGNP10124 158 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 TNNI2P48788 182 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 NCBP1Q09161 790 aaKnown RBP15.76■□□□□ 0.11
TRIM4-201ENST00000349062 SLC27A3Q5K4L6 730 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 BBXQ8WY36 941 aaPredicted RBP15.76■□□□□ 0.11
TRIM4-201ENST00000349062 ZBTB9Q96C00 473 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 CTNND2Q9UQB3 1225 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
TRIM4-201ENST00000349062 GTF2F1P35269 517 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRIM4-201ENST00000349062 UBA7P41226 1012 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 STAT6P42226 847 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 RHBDL3P58872 404 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 NPY5RQ15761 445 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 AOC3Q16853 763 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 CRY2Q49AN0 593 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 ZNF287Q9HBT7 754 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 TXKP42681 527 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 PAGE5Q96GU1 130 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 MRFAP1L1Q96HT8 127 aa15.76■□□□□ 0.11
TRIM4-201ENST00000349062 GPR75-ASB3A0A0A6YYF3 556 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 C21orf2O43822 256 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 SSBP05455 408 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRIM4-201ENST00000349062 CUL4BQ13620 913 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 UBE2SQ16763 222 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 DGKHQ86XP1 1220 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 ATP6V0A2Q9Y487 856 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 TECP42680 631 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 SPICE1Q8N0Z3 855 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
TRIM4-201ENST00000349062 MKRN1Q9UHC7 482 aaKnown RBP15.75■□□□□ 0.11
TRIM4-201ENST00000349062 CLRN2A0PK11 232 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 ACTN4O43707 911 aaKnown RBP15.75■□□□□ 0.11
TRIM4-201ENST00000349062 ZYXQ15942 572 aaKnown RBP15.75■□□□□ 0.11
TRIM4-201ENST00000349062 IL17AQ16552 155 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 SLF2Q8IX21 1173 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 CCDC34Q96HJ3 373 aa15.75■□□□□ 0.11
TRIM4-201ENST00000349062 C4BP0C0L5 1744 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 PPP2R5BQ15173 497 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 ARMCX5Q6P1M9 558 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 DTHD1Q6ZMT9 781 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 NUP88Q99567 741 aaPredicted RBP15.74■□□□□ 0.11
TRIM4-201ENST00000349062 GDAQ9Y2T3 454 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 VGLL3A8MV65 326 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 H0YIN7 160 aa15.74■□□□□ 0.11
TRIM4-201ENST00000349062 PLCG2P16885 1265 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms