RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCL1	YPR025C	SOF1	P33750	489 aa	Known RBP	4.16	□□□□□ -1.74
CCL1	YPR025C	NTR2	P36118	322 aa	Predicted RBP	4.16	□□□□□ -1.74
CCL1	YPR025C	SEC31	P38968	1273 aa	Known RBP	4.16	□□□□□ -1.74
CCL1	YPR025C	YIL024C	P40543	189 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	MEP3	P53390	489 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	COP1	P53622	1201 aa	Known RBP	4.16	□□□□□ -1.74
CCL1	YPR025C	RSM28	Q03430	361 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	PSK2	Q08217	1101 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	MCH4	Q08268	501 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	YLR049C	Q12110	428 aa		4.16	□□□□□ -1.74
CCL1	YPR025C	MRP20	P32387	263 aa		4.15	□□□□□ -1.75
CCL1	YPR025C	OCT1	P35999	772 aa		4.15	□□□□□ -1.75
CCL1	YPR025C	AAP1	P37898	856 aa	Known RBP	4.15	□□□□□ -1.75
CCL1	YPR025C	DPH1	P40487	425 aa	Known RBP	4.15	□□□□□ -1.75
CCL1	YPR025C	YNR061C	P53747	219 aa		4.15	□□□□□ -1.75
CCL1	YPR025C	ECM22	Q05958	814 aa	Predicted RBP	4.15	□□□□□ -1.75
CCL1	YPR025C	OPY2	Q06810	360 aa		4.15	□□□□□ -1.75
CCL1	YPR025C	GET3	Q12154	354 aa	Known RBP	4.15	□□□□□ -1.75
CCL1	YPR025C	NBP2	Q12163	236 aa		4.15	□□□□□ -1.75
CCL1	YPR025C	RRI1	Q12468	440 aa		4.15	□□□□□ -1.75
CCL1	YPR025C	TOP1	P04786	769 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	FUM1	P08417	488 aa	Known RBP	4.14	□□□□□ -1.75
CCL1	YPR025C	PET111	P08468	800 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	RPB2	P08518	1224 aa	Known RBP	4.14	□□□□□ -1.75
CCL1	YPR025C	CNA1	P23287	553 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	CBF2	P32504	956 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	ALY1	P36117	915 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	KTR3	P38130	404 aa	Predicted RBP	4.14	□□□□□ -1.75
CCL1	YPR025C	JHD1	P40034	492 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	YJR061W	P40355	935 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	CFD1	P40558	293 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	IME4	P41833	600 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	PFA5	Q03289	374 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	RCO1	Q04779	684 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	FRE3	Q08905	711 aa		4.14	□□□□□ -1.75
CCL1	YPR025C	SCO2	P38072	301 aa		4.13	□□□□□ -1.75
CCL1	YPR025C	TPA1	P40032	644 aa	Known RBP	4.13	□□□□□ -1.75
CCL1	YPR025C	MNT3	P40549	630 aa		4.13	□□□□□ -1.75
CCL1	YPR025C	SVL3	Q03088	825 aa	Known RBP	4.13	□□□□□ -1.75
CCL1	YPR025C	MUB1	Q03162	620 aa		4.13	□□□□□ -1.75
CCL1	YPR025C	YLR455W	Q06188	304 aa		4.13	□□□□□ -1.75
CCL1	YPR025C	PIG1	Q06216	648 aa		4.13	□□□□□ -1.75
CCL1	YPR025C	GPN2	Q08726	347 aa	Predicted RBP	4.13	□□□□□ -1.75
CCL1	YPR025C	YBR085C-A	O43137	85 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	CHO1	P08456	276 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	GPA1	P08539	472 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	PXL1	P36166	706 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	ECM10	P39987	644 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	FMP10	P40098	244 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	SLZ1	P40167	298 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	SEC24	P40482	926 aa	Known RBP	4.12	□□□□□ -1.75
CCL1	YPR025C	SIP4	P46954	829 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	CTK2	P46962	323 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	UBP8	P50102	471 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	YGL036W	P53185	909 aa	Predicted RBP	4.12	□□□□□ -1.75
CCL1	YPR025C	YNL144C	P53907	740 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	VIP1	Q06685	1146 aa	Known RBP	4.12	□□□□□ -1.75
CCL1	YPR025C	SKM1	Q12469	655 aa		4.12	□□□□□ -1.75
CCL1	YPR025C	TKL1	P23254	680 aa	Known RBP	4.11	□□□□□ -1.75
CCL1	YPR025C	ECM32	P32644	1121 aa	Known RBP	4.11	□□□□□ -1.75
CCL1	YPR025C	ESL2	P36168	1195 aa		4.11	□□□□□ -1.75
CCL1	YPR025C	VPS41	P38959	992 aa		4.11	□□□□□ -1.75
CCL1	YPR025C	YEL068C	P39977	110 aa		4.11	□□□□□ -1.75
CCL1	YPR025C	SCS3	P53012	380 aa		4.11	□□□□□ -1.75
CCL1	YPR025C	PIL1	P53252	339 aa	Known RBP	4.11	□□□□□ -1.75
CCL1	YPR025C	BSC5	P53755	489 aa		4.11	□□□□□ -1.75
CCL1	YPR025C	ENT4	Q07872	247 aa		4.11	□□□□□ -1.75
CCL1	YPR025C	BUD21	Q08492	214 aa	Predicted RBP	4.11	□□□□□ -1.75
CCL1	YPR025C	HER1	Q12276	1246 aa		4.11	□□□□□ -1.75
CCL1	YPR025C	YPR089W	O13585	888 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	HXK2	P04807	486 aa	Known RBP	4.1	□□□□□ -1.75
CCL1	YPR025C	YER190C-B	P0CX94	160 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	YEL077W-A	P0CX95	160 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	YGR296C-B	P0CX96	160 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	YPL283W-B	P0CX97	160 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	YPR204C-A	P0CX98	160 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	CHS3	P29465	1165 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	MUD2	P36084	527 aa	Known RBP	4.1	□□□□□ -1.75
CCL1	YPR025C	BUR6	P40096	142 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	YFR020W	P43600	232 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	YPT11	P48559	417 aa		4.1	□□□□□ -1.75
CCL1	YPR025C	YMR124W	P39523	943 aa	Known RBP	4.09	□□□□□ -1.75
CCL1	YPR025C	LYS14	P40971	790 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	RPN11	P43588	306 aa	Known RBP	4.09	□□□□□ -1.75
CCL1	YPR025C	VPS25	P47142	202 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	AAD10	P47182	288 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	IST1	P53843	298 aa	Predicted RBP	4.09	□□□□□ -1.75
CCL1	YPR025C	INN1	P53901	409 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	EAF7	P53911	425 aa	Known RBP	4.09	□□□□□ -1.75
CCL1	YPR025C	RAD30	Q04049	632 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	SWF1	Q04629	336 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	SKG3	Q06315	1026 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	YDL121C	Q07541	149 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	YDR056C	Q12025	205 aa		4.09	□□□□□ -1.75
CCL1	YPR025C	CDC24	P11433	854 aa	Predicted RBP	4.08	□□□□□ -1.76
CCL1	YPR025C	RAP1	P11938	827 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	PRE8	P23639	250 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	GFD2	P25370	566 aa	Known RBP	4.08	□□□□□ -1.76
CCL1	YPR025C	GAT1	P43574	510 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	ARC1	P46672	376 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms