RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C PRR1P28708 518 aa4.43□□□□□ -1.7
SNF8YPL002C VTC2P43585 828 aa4.43□□□□□ -1.7
SNF8YPL002C FYV8P46949 817 aaKnown RBP4.43□□□□□ -1.7
SNF8YPL002C SHE10P53075 577 aa4.43□□□□□ -1.7
SNF8YPL002C PGA2P53903 129 aa4.43□□□□□ -1.7
SNF8YPL002C ARP5P53946 755 aa4.43□□□□□ -1.7
SNF8YPL002C SLG1P54867 378 aa4.43□□□□□ -1.7
SNF8YPL002C LEA1Q08963 238 aaPredicted RBP4.43□□□□□ -1.7
SNF8YPL002C ZPS1Q12512 249 aa4.43□□□□□ -1.7
SNF8YPL002C HSP82P02829 709 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C FRS2P15625 503 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C SWI4P25302 1093 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C SAT4P25333 603 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C RPC53P25441 422 aa4.42□□□□□ -1.7
SNF8YPL002C GPI10P30777 616 aa4.42□□□□□ -1.7
SNF8YPL002C YMC1P32331 307 aa4.42□□□□□ -1.7
SNF8YPL002C DUG2P38149 878 aa4.42□□□□□ -1.7
SNF8YPL002C SSZ1P38788 538 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C PMC1P38929 1173 aaPredicted RBP4.42□□□□□ -1.7
SNF8YPL002C DOT6P40059 670 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C BTT1P40314 149 aaPredicted RBP4.42□□□□□ -1.7
SNF8YPL002C RPT2P40327 437 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C ULP2P40537 1034 aaPredicted RBP4.42□□□□□ -1.7
SNF8YPL002C SCD6P45978 349 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SNF8YPL002C BNA3P47039 444 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C ASN1P49089 572 aaKnown RBP4.42□□□□□ -1.7
SNF8YPL002C SEC5P89102 971 aa4.42□□□□□ -1.7
SNF8YPL002C ATG33Q06485 197 aa4.42□□□□□ -1.7
SNF8YPL002C VPS36Q06696 566 aa4.42□□□□□ -1.7
SNF8YPL002C TAF10Q12030 206 aa4.42□□□□□ -1.7
SNF8YPL002C GAL80P04387 435 aa4.41□□□□□ -1.7
SNF8YPL002C SIR1P21691 654 aa4.41□□□□□ -1.7
SNF8YPL002C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SNF8YPL002C PCL2P25693 308 aa4.41□□□□□ -1.7
SNF8YPL002C MSS1P32559 526 aaPredicted RBP4.41□□□□□ -1.7
SNF8YPL002C CTP1P38152 299 aa4.41□□□□□ -1.7
SNF8YPL002C MMS4P38257 691 aa4.41□□□□□ -1.7
SNF8YPL002C YPT35P38815 214 aaKnown RBP4.41□□□□□ -1.7
SNF8YPL002C PCF11P39081 626 aaPredicted RBP4.41□□□□□ -1.7
SNF8YPL002C KHA1P40309 873 aa4.41□□□□□ -1.7
SNF8YPL002C YIL077CP40508 320 aa4.41□□□□□ -1.7
SNF8YPL002C SPO22P40511 975 aa4.41□□□□□ -1.7
SNF8YPL002C CHS6P40955 746 aa4.41□□□□□ -1.7
SNF8YPL002C EPL1P43572 832 aa4.41□□□□□ -1.7
SNF8YPL002C SDA1P53313 767 aaKnown RBP4.41□□□□□ -1.7
SNF8YPL002C TRS130Q03660 1102 aa4.41□□□□□ -1.7
SNF8YPL002C SHS1Q07657 551 aa4.41□□□□□ -1.7
SNF8YPL002C YLR125WQ12138 136 aa4.41□□□□□ -1.7
SNF8YPL002C TIP41Q12199 356 aa4.41□□□□□ -1.7
SNF8YPL002C NBL1Q3E7Y6 73 aa4.41□□□□□ -1.7
SNF8YPL002C APM4Q99186 491 aa4.41□□□□□ -1.7
SNF8YPL002C PRP8P33334 2413 aaKnown RBP4.4□□□□□ -1.7
SNF8YPL002C TUF1P02992 437 aaKnown RBP4.4□□□□□ -1.71
SNF8YPL002C SSB1P11484 613 aaKnown RBP4.4□□□□□ -1.71
SNF8YPL002C PHO8P11491 566 aa4.4□□□□□ -1.71
SNF8YPL002C MTF1P14908 341 aaKnown RBP4.4□□□□□ -1.71
SNF8YPL002C GAC1P28006 793 aa4.4□□□□□ -1.71
SNF8YPL002C PEX6P33760 1030 aa4.4□□□□□ -1.71
SNF8YPL002C STT3P39007 718 aaKnown RBP4.4□□□□□ -1.71
SNF8YPL002C SSB2P40150 613 aaKnown RBP4.4□□□□□ -1.71
SNF8YPL002C GAT1P43574 510 aa4.4□□□□□ -1.71
SNF8YPL002C IES1P43579 692 aa4.4□□□□□ -1.71
SNF8YPL002C POL31P46957 487 aa4.4□□□□□ -1.71
SNF8YPL002C YJR039WP47107 1121 aa4.4□□□□□ -1.71
SNF8YPL002C CAF130P53280 1122 aaPredicted RBP4.4□□□□□ -1.71
SNF8YPL002C VTC3Q02725 835 aa4.4□□□□□ -1.71
SNF8YPL002C DCS2Q12123 353 aa4.4□□□□□ -1.71
SNF8YPL002C RKI1Q12189 258 aa4.4□□□□□ -1.71
SNF8YPL002C HRT3Q12347 344 aa4.4□□□□□ -1.71
SNF8YPL002C ADE5,7P07244 802 aaKnown RBP4.39□□□□□ -1.71
SNF8YPL002C RNA1P11745 407 aaKnown RBP4.39□□□□□ -1.71
SNF8YPL002C NUP1P20676 1076 aa4.39□□□□□ -1.71
SNF8YPL002C UGP1P32861 499 aaKnown RBP4.39□□□□□ -1.71
SNF8YPL002C YPT7P32939 208 aa4.39□□□□□ -1.71
SNF8YPL002C TCD2P36101 447 aaKnown RBP4.39□□□□□ -1.71
SNF8YPL002C UBP13P38187 747 aa4.39□□□□□ -1.71
SNF8YPL002C SHE3P38272 425 aaKnown RBP4.39□□□□□ -1.71
SNF8YPL002C SIP3P38717 1229 aa4.39□□□□□ -1.71
SNF8YPL002C OCA5P38738 679 aa4.39□□□□□ -1.71
SNF8YPL002C ERC1P38767 581 aa4.39□□□□□ -1.71
SNF8YPL002C PIH1P38768 344 aa4.39□□□□□ -1.71
SNF8YPL002C PMT6P42934 759 aa4.39□□□□□ -1.71
SNF8YPL002C TLG1Q03322 224 aa4.39□□□□□ -1.71
SNF8YPL002C HFD1Q04458 532 aa4.39□□□□□ -1.71
SNF8YPL002C FUS2Q05670 677 aa4.39□□□□□ -1.71
SNF8YPL002C YSH1Q06224 779 aaPredicted RBP4.39□□□□□ -1.71
SNF8YPL002C POM34Q12445 299 aa4.39□□□□□ -1.71
SNF8YPL002C CTF3Q12748 733 aa4.39□□□□□ -1.71
SNF8YPL002C APL3P38065 1025 aa4.38□□□□□ -1.71
SNF8YPL002C SHQ1P40486 507 aaPredicted RBP4.38□□□□□ -1.71
SNF8YPL002C NPA3P47122 385 aa4.38□□□□□ -1.71
SNF8YPL002C SNF12P53628 566 aa4.38□□□□□ -1.71
SNF8YPL002C RTC4P53850 401 aa4.38□□□□□ -1.71
SNF8YPL002C NOP13P53883 403 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SNF8YPL002C CBK1P53894 756 aa4.38□□□□□ -1.71
SNF8YPL002C UGO1Q03327 502 aa4.38□□□□□ -1.71
SNF8YPL002C YFT2Q06676 274 aa4.38□□□□□ -1.71
SNF8YPL002C YCG1Q06680 1035 aa4.38□□□□□ -1.71
SNF8YPL002C YPQ1Q12010 308 aa4.38□□□□□ -1.71
SNF8YPL002C SGT2Q12118 346 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms