RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C RPA49Q01080 415 aaPredicted RBP5.58□□□□□ -1.52
NUP1YOR098C VPS64Q03944 604 aa5.58□□□□□ -1.52
NUP1YOR098C STP3Q05937 343 aa5.58□□□□□ -1.52
NUP1YOR098C PYC1P11154 1178 aaKnown RBP5.58□□□□□ -1.52
NUP1YOR098C YDL183CP48569 320 aa5.58□□□□□ -1.52
NUP1YOR098C MCP2Q06567 569 aa5.58□□□□□ -1.52
NUP1YOR098C PUS7Q08647 676 aaKnown RBP5.58□□□□□ -1.52
NUP1YOR098C EST1P17214 699 aaPredicted RBP5.57□□□□□ -1.52
NUP1YOR098C PRE4P30657 266 aa5.57□□□□□ -1.52
NUP1YOR098C YDR089WP38966 869 aa5.57□□□□□ -1.52
NUP1YOR098C VFA1P40080 203 aa5.57□□□□□ -1.52
NUP1YOR098C GID8P40208 455 aa5.57□□□□□ -1.52
NUP1YOR098C RAD17P48581 401 aa5.57□□□□□ -1.52
NUP1YOR098C MUB1Q03162 620 aa5.57□□□□□ -1.52
NUP1YOR098C COQ4O13525 335 aa5.57□□□□□ -1.52
NUP1YOR098C RPL1AP0CX43 217 aaKnown RBP5.57□□□□□ -1.52
NUP1YOR098C RPL1BP0CX44 217 aaKnown RBP5.57□□□□□ -1.52
NUP1YOR098C MRPL40P36534 297 aa5.57□□□□□ -1.52
NUP1YOR098C MAL33P38157 468 aa5.57□□□□□ -1.52
NUP1YOR098C STB5P38699 743 aa5.57□□□□□ -1.52
NUP1YOR098C SPT8P38915 602 aa5.57□□□□□ -1.52
NUP1YOR098C EPL1P43572 832 aa5.57□□□□□ -1.52
NUP1YOR098C ABZ2Q03266 374 aa5.57□□□□□ -1.52
NUP1YOR098C MRD1Q06106 887 aaKnown RBP5.57□□□□□ -1.52
NUP1YOR098C TCO89Q08921 799 aa5.57□□□□□ -1.52
NUP1YOR098C SEC39Q12745 709 aa5.57□□□□□ -1.52
NUP1YOR098C YJR112W-AQ3E743 109 aa5.57□□□□□ -1.52
NUP1YOR098C SOD2P00447 233 aa5.57□□□□□ -1.52
NUP1YOR098C SAC7P17121 654 aa5.57□□□□□ -1.52
NUP1YOR098C FPS1P23900 669 aa5.57□□□□□ -1.52
NUP1YOR098C ATG19P35193 415 aa5.57□□□□□ -1.52
NUP1YOR098C TIF5P38431 405 aaKnown RBP5.57□□□□□ -1.52
NUP1YOR098C SMC2P38989 1170 aaKnown RBP5.57□□□□□ -1.52
NUP1YOR098C YNL195CP40168 261 aa5.57□□□□□ -1.52
NUP1YOR098C SEC9P40357 651 aa5.57□□□□□ -1.52
NUP1YOR098C AIR1P40507 360 aaKnown RBP5.57□□□□□ -1.52
NUP1YOR098C PXA1P41909 870 aa5.57□□□□□ -1.52
NUP1YOR098C MTR3P48240 250 aaPredicted RBP5.57□□□□□ -1.52
NUP1YOR098C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
NUP1YOR098C AIM6Q07716 390 aa5.57□□□□□ -1.52
NUP1YOR098C YEH1Q07804 573 aa5.57□□□□□ -1.52
NUP1YOR098C BUD7Q08754 746 aa5.57□□□□□ -1.52
NUP1YOR098C LYS21Q12122 440 aaKnown RBP5.57□□□□□ -1.52
NUP1YOR098C HAP1P0CE41 1502 aa5.56□□□□□ -1.52
NUP1YOR098C RRP43P25359 394 aaPredicted RBP5.56□□□□□ -1.52
NUP1YOR098C PHO91P27514 894 aa5.56□□□□□ -1.52
NUP1YOR098C THI2P38141 450 aa5.56□□□□□ -1.52
NUP1YOR098C TDP1P38319 544 aa5.56□□□□□ -1.52
NUP1YOR098C OTU2P38747 307 aaKnown RBP5.56□□□□□ -1.52
NUP1YOR098C CAK1P43568 368 aaPredicted RBP5.56□□□□□ -1.52
NUP1YOR098C SOV1Q04748 898 aa5.56□□□□□ -1.52
NUP1YOR098C SVS1Q12254 260 aa5.56□□□□□ -1.52
NUP1YOR098C ADE2P21264 571 aaKnown RBP5.56□□□□□ -1.52
NUP1YOR098C DIT1P21623 536 aa5.56□□□□□ -1.52
NUP1YOR098C YPT7P32939 208 aa5.56□□□□□ -1.52
NUP1YOR098C COY1P34237 679 aa5.56□□□□□ -1.52
NUP1YOR098C CCT6P39079 546 aa5.56□□□□□ -1.52
NUP1YOR098C RTR1P40084 226 aaPredicted RBP5.56□□□□□ -1.52
NUP1YOR098C SLZ1P40167 298 aa5.56□□□□□ -1.52
NUP1YOR098C YPT6Q99260 215 aa5.56□□□□□ -1.52
NUP1YOR098C NUP192P47054 1683 aa5.56□□□□□ -1.52
NUP1YOR098C DFR1P07807 211 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
NUP1YOR098C FBP1P09201 348 aa5.55□□□□□ -1.52
NUP1YOR098C CHL1P22516 861 aaPredicted RBP5.55□□□□□ -1.52
NUP1YOR098C MRPL25P23369 157 aa5.55□□□□□ -1.52
NUP1YOR098C MAE1P36013 669 aaKnown RBP5.55□□□□□ -1.52
NUP1YOR098C RRT2P38332 387 aa5.55□□□□□ -1.52
NUP1YOR098C CUE3P53137 624 aaKnown RBP5.55□□□□□ -1.52
NUP1YOR098C LSB1P53281 241 aa5.55□□□□□ -1.52
NUP1YOR098C RRT8Q08219 342 aa5.55□□□□□ -1.52
NUP1YOR098C NUS1Q12063 375 aa5.55□□□□□ -1.52
NUP1YOR098C ARO3P14843 370 aaKnown RBP5.55□□□□□ -1.52
NUP1YOR098C SRB2P34162 210 aa5.55□□□□□ -1.52
NUP1YOR098C SEF1P34228 1148 aa5.55□□□□□ -1.52
NUP1YOR098C YUH1P35127 236 aa5.55□□□□□ -1.52
NUP1YOR098C YGR111WP53265 400 aa5.55□□□□□ -1.52
NUP1YOR098C RIA1P53893 1110 aa5.55□□□□□ -1.52
NUP1YOR098C CLP1Q08685 445 aaPredicted RBP5.55□□□□□ -1.52
NUP1YOR098C RNA1P11745 407 aaKnown RBP5.55□□□□□ -1.52
NUP1YOR098C NAR1P23503 491 aaKnown RBP5.55□□□□□ -1.52
NUP1YOR098C AUR1P36107 401 aaPredicted RBP5.55□□□□□ -1.52
NUP1YOR098C GPT2P36148 743 aa5.55□□□□□ -1.52
NUP1YOR098C BPL1P48445 690 aaPredicted RBP5.55□□□□□ -1.52
NUP1YOR098C MAK10Q02197 733 aa5.55□□□□□ -1.52
NUP1YOR098C SGO1Q08490 590 aa5.55□□□□□ -1.52
NUP1YOR098C PLP2Q12017 286 aa5.55□□□□□ -1.52
NUP1YOR098C TPK2P06245 380 aa5.54□□□□□ -1.52
NUP1YOR098C MER1P16523 270 aa5.54□□□□□ -1.52
NUP1YOR098C REV7P38927 245 aa5.54□□□□□ -1.52
NUP1YOR098C SAK1P38990 1142 aa5.54□□□□□ -1.52
NUP1YOR098C ARP5P53946 755 aa5.54□□□□□ -1.52
NUP1YOR098C YML037CQ03703 340 aa5.54□□□□□ -1.52
NUP1YOR098C TAP42Q04372 366 aa5.54□□□□□ -1.52
NUP1YOR098C ATG29Q12092 213 aa5.54□□□□□ -1.52
NUP1YOR098C LEU9Q12166 604 aaKnown RBP5.54□□□□□ -1.52
NUP1YOR098C LTV1P34078 463 aa5.54□□□□□ -1.52
NUP1YOR098C WHI3P34761 661 aaKnown RBP5.54□□□□□ -1.52
NUP1YOR098C NCS6P53088 359 aa5.54□□□□□ -1.52
NUP1YOR098C YBP2P53169 641 aa5.54□□□□□ -1.52
NUP1YOR098C YGR066CP53242 292 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms