RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C YMR124WP39523 943 aaKnown RBP4.29□□□□□ -1.72
PML39YML107C UBP8P50102 471 aa4.29□□□□□ -1.72
PML39YML107C SEC5P89102 971 aa4.29□□□□□ -1.72
PML39YML107C MRPL1Q04599 285 aa4.29□□□□□ -1.72
PML39YML107C SSP2Q08646 371 aa4.29□□□□□ -1.72
PML39YML107C NEW1Q08972 1196 aaKnown RBP4.29□□□□□ -1.72
PML39YML107C YPR089WO13585 888 aa4.28□□□□□ -1.72
PML39YML107C CNA1P23287 553 aa4.28□□□□□ -1.72
PML39YML107C NTR2P36118 322 aaPredicted RBP4.28□□□□□ -1.72
PML39YML107C GEX2P36173 615 aa4.28□□□□□ -1.72
PML39YML107C AAP1P37898 856 aaKnown RBP4.28□□□□□ -1.72
PML39YML107C CDC1P40986 491 aa4.28□□□□□ -1.72
PML39YML107C GAT1P43574 510 aa4.28□□□□□ -1.72
PML39YML107C VPS4P52917 437 aa4.28□□□□□ -1.72
PML39YML107C CBK1P53894 756 aa4.28□□□□□ -1.72
PML39YML107C VTC3Q02725 835 aa4.28□□□□□ -1.72
PML39YML107C PFA5Q03289 374 aa4.28□□□□□ -1.72
PML39YML107C RGT2Q12300 763 aa4.28□□□□□ -1.72
PML39YML107C VCX1Q99385 411 aa4.28□□□□□ -1.72
PML39YML107C GAL4P04386 881 aa4.27□□□□□ -1.73
PML39YML107C TMT1P32643 299 aa4.27□□□□□ -1.73
PML39YML107C ECM32P32644 1121 aaKnown RBP4.27□□□□□ -1.73
PML39YML107C SPC97P38863 823 aa4.27□□□□□ -1.73
PML39YML107C AXL2P38928 823 aa4.27□□□□□ -1.73
PML39YML107C SEC31P38968 1273 aaKnown RBP4.27□□□□□ -1.73
PML39YML107C TPA1P40032 644 aaKnown RBP4.27□□□□□ -1.73
PML39YML107C SWP82P43554 623 aa4.27□□□□□ -1.73
PML39YML107C VPS25P47142 202 aa4.27□□□□□ -1.73
PML39YML107C YPT11P48559 417 aa4.27□□□□□ -1.73
PML39YML107C RSM28Q03430 361 aa4.27□□□□□ -1.73
PML39YML107C SNO4Q04902 237 aa4.27□□□□□ -1.73
PML39YML107C HSP33Q08914 237 aaKnown RBP4.27□□□□□ -1.73
PML39YML107C HSP32Q08992 237 aa4.27□□□□□ -1.73
PML39YML107C HER1Q12276 1246 aa4.27□□□□□ -1.73
PML39YML107C YOR019WQ99248 730 aa4.27□□□□□ -1.73
PML39YML107C SRP54P20424 541 aaKnown RBP4.26□□□□□ -1.73
PML39YML107C TOM71P38825 639 aaKnown RBP4.26□□□□□ -1.73
PML39YML107C PSD1P39006 500 aa4.26□□□□□ -1.73
PML39YML107C PCI8P40512 444 aa4.26□□□□□ -1.73
PML39YML107C SWF1Q04629 336 aa4.26□□□□□ -1.73
PML39YML107C YLR455WQ06188 304 aa4.26□□□□□ -1.73
PML39YML107C PIG1Q06216 648 aa4.26□□□□□ -1.73
PML39YML107C HXK2P04807 486 aaKnown RBP4.25□□□□□ -1.73
PML39YML107C GPA1P08539 472 aa4.25□□□□□ -1.73
PML39YML107C RAP1P11938 827 aa4.25□□□□□ -1.73
PML39YML107C ESL2P36168 1195 aa4.25□□□□□ -1.73
PML39YML107C ECM10P39987 644 aa4.25□□□□□ -1.73
PML39YML107C YIR016WP40572 265 aa4.25□□□□□ -1.73
PML39YML107C IME4P41833 600 aa4.25□□□□□ -1.73
PML39YML107C CTK2P46962 323 aa4.25□□□□□ -1.73
PML39YML107C YGL036WP53185 909 aaPredicted RBP4.25□□□□□ -1.73
PML39YML107C SCW4P53334 386 aaKnown RBP4.25□□□□□ -1.73
PML39YML107C RCO1Q04779 684 aa4.25□□□□□ -1.73
PML39YML107C PSK2Q08217 1101 aa4.25□□□□□ -1.73
PML39YML107C ATX2Q12067 313 aa4.25□□□□□ -1.73
PML39YML107C YER145C-AA0A023PYF4 145 aa4.24□□□□□ -1.73
PML39YML107C YBR085C-AO43137 85 aa4.24□□□□□ -1.73
PML39YML107C PET111P08468 800 aa4.24□□□□□ -1.73
PML39YML107C RPB2P08518 1224 aaKnown RBP4.24□□□□□ -1.73
PML39YML107C PRE8P23639 250 aa4.24□□□□□ -1.73
PML39YML107C MGM1P32266 881 aa4.24□□□□□ -1.73
PML39YML107C MRP20P32387 263 aa4.24□□□□□ -1.73
PML39YML107C VRG4P40107 337 aa4.24□□□□□ -1.73
PML39YML107C YJR061WP40355 935 aa4.24□□□□□ -1.73
PML39YML107C IST1P53843 298 aaPredicted RBP4.24□□□□□ -1.73
PML39YML107C MUB1Q03162 620 aa4.24□□□□□ -1.73
PML39YML107C OPY2Q06810 360 aa4.24□□□□□ -1.73
PML39YML107C FRE3Q08905 711 aa4.24□□□□□ -1.73
PML39YML107C SKM1Q12469 655 aa4.24□□□□□ -1.73
PML39YML107C CBF2P32504 956 aa4.23□□□□□ -1.73
PML39YML107C ALY1P36117 915 aa4.23□□□□□ -1.73
PML39YML107C PXL1P36166 706 aa4.23□□□□□ -1.73
PML39YML107C YFR020WP43600 232 aa4.23□□□□□ -1.73
PML39YML107C NNF2P53253 936 aa4.23□□□□□ -1.73
PML39YML107C MPS1P54199 764 aa4.23□□□□□ -1.73
PML39YML107C FUM1P08417 488 aaKnown RBP4.22□□□□□ -1.73
PML39YML107C YER190C-BP0CX94 160 aa4.22□□□□□ -1.73
PML39YML107C YEL077W-AP0CX95 160 aa4.22□□□□□ -1.73
PML39YML107C YGR296C-BP0CX96 160 aa4.22□□□□□ -1.73
PML39YML107C YPL283W-BP0CX97 160 aa4.22□□□□□ -1.73
PML39YML107C YPR204C-AP0CX98 160 aa4.22□□□□□ -1.73
PML39YML107C TKL1P23254 680 aaKnown RBP4.22□□□□□ -1.73
PML39YML107C ASK1P35734 292 aa4.22□□□□□ -1.73
PML39YML107C SLZ1P40167 298 aa4.22□□□□□ -1.73
PML39YML107C MDV1P47025 714 aa4.22□□□□□ -1.73
PML39YML107C BSC5P53755 489 aa4.22□□□□□ -1.73
PML39YML107C RPL15BP54780 204 aaPredicted RBP4.22□□□□□ -1.73
PML39YML107C SKG3Q06315 1026 aa4.22□□□□□ -1.73
PML39YML107C GEP3Q08622 556 aa4.22□□□□□ -1.73
PML39YML107C GPN2Q08726 347 aaPredicted RBP4.22□□□□□ -1.73
PML39YML107C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
PML39YML107C YOL087CQ99247 1116 aa4.22□□□□□ -1.73
PML39YML107C AIM17P23180 465 aaKnown RBP4.21□□□□□ -1.74
PML39YML107C MCM10P32354 571 aa4.21□□□□□ -1.74
PML39YML107C SAC1P32368 623 aaKnown RBP4.21□□□□□ -1.74
PML39YML107C VPS41P38959 992 aa4.21□□□□□ -1.74
PML39YML107C VID27P40157 782 aa4.21□□□□□ -1.74
PML39YML107C SEC24P40482 926 aaKnown RBP4.21□□□□□ -1.74
PML39YML107C RPN11P43588 306 aaKnown RBP4.21□□□□□ -1.74
PML39YML107C DPB11P47027 764 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms