RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C YDR262WQ12331 272 aa7.28□□□□□ -1.24
PUP2YGR253C YLR149CQ99296 730 aa7.28□□□□□ -1.24
PUP2YGR253C CPA1P07258 411 aaKnown RBP7.27□□□□□ -1.25
PUP2YGR253C PHO84P25297 587 aaKnown RBP7.27□□□□□ -1.25
PUP2YGR253C SPT16P32558 1035 aaKnown RBP7.27□□□□□ -1.25
PUP2YGR253C CTF13P35203 478 aa7.27□□□□□ -1.25
PUP2YGR253C YBP1P38315 674 aa7.27□□□□□ -1.25
PUP2YGR253C SSU1P41930 458 aa7.27□□□□□ -1.25
PUP2YGR253C ALK1P43633 760 aaKnown RBP7.27□□□□□ -1.25
PUP2YGR253C HST3P53687 447 aa7.27□□□□□ -1.25
PUP2YGR253C MET14Q02196 202 aa7.27□□□□□ -1.25
PUP2YGR253C DIG1Q03063 452 aaKnown RBP7.27□□□□□ -1.25
PUP2YGR253C ESC2Q06340 456 aa7.27□□□□□ -1.25
PUP2YGR253C YLR462WO13556 202 aa7.26□□□□□ -1.25
PUP2YGR253C PDC5P16467 563 aaKnown RBP7.26□□□□□ -1.25
PUP2YGR253C MRPL9P31334 269 aa7.26□□□□□ -1.25
PUP2YGR253C RKM3P38222 552 aa7.26□□□□□ -1.25
PUP2YGR253C DBP8P38719 431 aa7.26□□□□□ -1.25
PUP2YGR253C YHL049CP38722 271 aa7.26□□□□□ -1.25
PUP2YGR253C PTI1P39927 425 aaPredicted RBP7.26□□□□□ -1.25
PUP2YGR253C YFL064CP43540 174 aa7.26□□□□□ -1.25
PUP2YGR253C KAP114P53067 1004 aa7.26□□□□□ -1.25
PUP2YGR253C EFM6P53970 246 aa7.26□□□□□ -1.25
PUP2YGR253C VHS1Q03785 461 aa7.26□□□□□ -1.25
PUP2YGR253C SOV1Q04748 898 aa7.26□□□□□ -1.25
PUP2YGR253C RCO1Q04779 684 aa7.26□□□□□ -1.25
PUP2YGR253C DIC1Q06143 298 aa7.26□□□□□ -1.25
PUP2YGR253C BUD7Q08754 746 aa7.26□□□□□ -1.25
PUP2YGR253C PFA4Q12006 378 aa7.26□□□□□ -1.25
PUP2YGR253C FRE7Q12333 620 aa7.26□□□□□ -1.25
PUP2YGR253C YBL111CQ3E7Y5 667 aa7.26□□□□□ -1.25
PUP2YGR253C VAN1P23642 535 aa7.25□□□□□ -1.25
PUP2YGR253C RRP43P25359 394 aaPredicted RBP7.25□□□□□ -1.25
PUP2YGR253C IMP3P32899 183 aaPredicted RBP7.25□□□□□ -1.25
PUP2YGR253C SEC61P32915 480 aa7.25□□□□□ -1.25
PUP2YGR253C CKB2P38930 258 aa7.25□□□□□ -1.25
PUP2YGR253C RSM10Q03201 203 aa7.25□□□□□ -1.25
PUP2YGR253C SIZ1Q04195 904 aa7.25□□□□□ -1.25
PUP2YGR253C APL4Q12028 832 aa7.25□□□□□ -1.25
PUP2YGR253C FAP7Q12055 197 aaPredicted RBP7.25□□□□□ -1.25
PUP2YGR253C GLE1Q12315 538 aa7.25□□□□□ -1.25
PUP2YGR253C LDB17Q12342 491 aa7.25□□□□□ -1.25
PUP2YGR253C VPS34P22543 875 aa7.24□□□□□ -1.25
PUP2YGR253C RAD57P25301 460 aa7.24□□□□□ -1.25
PUP2YGR253C NDI1P32340 513 aa7.24□□□□□ -1.25
PUP2YGR253C PET309P32522 965 aaPredicted RBP7.24□□□□□ -1.25
PUP2YGR253C NRP1P32770 719 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
PUP2YGR253C CDC13P32797 924 aaKnown RBP7.24□□□□□ -1.25
PUP2YGR253C MRPL37P36532 105 aa7.24□□□□□ -1.25
PUP2YGR253C LCP5P40079 357 aaPredicted RBP7.24□□□□□ -1.25
PUP2YGR253C LSM5P40089 93 aaKnown RBP7.24□□□□□ -1.25
PUP2YGR253C SPG5P42933 373 aa7.24□□□□□ -1.25
PUP2YGR253C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
PUP2YGR253C SLU7Q02775 382 aaKnown RBP7.24□□□□□ -1.25
PUP2YGR253C CCE1Q03702 353 aa7.24□□□□□ -1.25
PUP2YGR253C YPR148CQ06523 435 aa7.24□□□□□ -1.25
PUP2YGR253C GUP2Q08929 609 aa7.24□□□□□ -1.25
PUP2YGR253C YSR3P23501 404 aa7.23□□□□□ -1.25
PUP2YGR253C MSH1P25846 959 aa7.23□□□□□ -1.25
PUP2YGR253C HXT1P32465 570 aa7.23□□□□□ -1.25
PUP2YGR253C DOM34P33309 386 aa7.23□□□□□ -1.25
PUP2YGR253C PRP18P33411 251 aaPredicted RBP7.23□□□□□ -1.25
PUP2YGR253C EMC3P36039 253 aa7.23□□□□□ -1.25
PUP2YGR253C GND1P38720 489 aaKnown RBP7.23□□□□□ -1.25
PUP2YGR253C TCD1P38756 429 aa7.23□□□□□ -1.25
PUP2YGR253C LYS1P38998 373 aaRIP-Chip data7.23□□□□□ -1.25not detected
PUP2YGR253C YEL073CP39974 107 aa7.23□□□□□ -1.25
PUP2YGR253C PMT3P47190 753 aa7.23□□□□□ -1.25
PUP2YGR253C HLJ1P48353 224 aa7.23□□□□□ -1.25
PUP2YGR253C RTS3P53289 263 aa7.23□□□□□ -1.25
PUP2YGR253C VPS38Q05919 439 aa7.23□□□□□ -1.25
PUP2YGR253C CDC73Q06697 393 aa7.23□□□□□ -1.25
PUP2YGR253C RRP12Q12754 1228 aaKnown RBP7.23□□□□□ -1.25
PUP2YGR253C SEM1O94742 89 aa7.22□□□□□ -1.25
PUP2YGR253C PTP1P25044 335 aa7.22□□□□□ -1.25
PUP2YGR253C HEM12P32347 362 aaPredicted RBP7.22□□□□□ -1.25
PUP2YGR253C HOG1P32485 435 aa7.22□□□□□ -1.25
PUP2YGR253C STB6P36085 766 aa7.22□□□□□ -1.25
PUP2YGR253C LDB7P38210 180 aa7.22□□□□□ -1.25
PUP2YGR253C RCK2P38623 610 aa7.22□□□□□ -1.25
PUP2YGR253C FAU1P40099 211 aa7.22□□□□□ -1.25
PUP2YGR253C ALG8P40351 577 aa7.22□□□□□ -1.25
PUP2YGR253C YJL107CP42947 387 aa7.22□□□□□ -1.25
PUP2YGR253C ARE2P53629 642 aaKnown RBP7.22□□□□□ -1.25
PUP2YGR253C SUR7P54003 302 aa7.22□□□□□ -1.25
PUP2YGR253C NHA1Q99271 985 aa7.22□□□□□ -1.25
PUP2YGR253C HOP1P20050 605 aa7.21□□□□□ -1.26
PUP2YGR253C MSB1P21339 1137 aaKnown RBP7.21□□□□□ -1.26
PUP2YGR253C YCR006CP25350 157 aa7.21□□□□□ -1.26
PUP2YGR253C NTH1P32356 751 aa7.21□□□□□ -1.26
PUP2YGR253C CNS1P33313 385 aa7.21□□□□□ -1.26
PUP2YGR253C SQT1P35184 431 aa7.21□□□□□ -1.26
PUP2YGR253C TAF14P35189 244 aa7.21□□□□□ -1.26
PUP2YGR253C KES1P35844 434 aaKnown RBP7.21□□□□□ -1.26
PUP2YGR253C NTR2P36118 322 aaPredicted RBP7.21□□□□□ -1.26
PUP2YGR253C YHL008CP38750 627 aa7.21□□□□□ -1.26
PUP2YGR253C LRO1P40345 661 aa7.21□□□□□ -1.26
PUP2YGR253C GTS1P40956 396 aa7.21□□□□□ -1.26
PUP2YGR253C IME4P41833 600 aa7.21□□□□□ -1.26
PUP2YGR253C BTN2P53286 410 aa7.21□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms