RNA–Protein interactions for RNA: YPL027W

SMA1, Transcript of Protein of unknown function involved in prospore membrane assembly, yeast

Gene SMA1, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMA1	YPL027W	CTR1	P49573	406 aa		5.21	□□□□□ -1.58
SMA1	YPL027W	CLP1	Q08685	445 aa	Predicted RBP	5.21	□□□□□ -1.58
SMA1	YPL027W	KEL3	Q08979	651 aa	Predicted RBP	5.21	□□□□□ -1.58
SMA1	YPL027W	NBP2	Q12163	236 aa		5.21	□□□□□ -1.58
SMA1	YPL027W	MDY2	Q12285	212 aa		5.21	□□□□□ -1.58
SMA1	YPL027W	SEC39	Q12745	709 aa		5.21	□□□□□ -1.58
SMA1	YPL027W	RPB4	P20433	221 aa	Predicted RBP	5.2	□□□□□ -1.58
SMA1	YPL027W	PWP1	P21304	576 aa	Known RBP	5.2	□□□□□ -1.58
SMA1	YPL027W	ATP12	P22135	325 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	SEC15	P22224	910 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	PRE8	P23639	250 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	PRP22	P24384	1145 aa	Known RBP	5.2	□□□□□ -1.58
SMA1	YPL027W	RRP43	P25359	394 aa	Predicted RBP	5.2	□□□□□ -1.58
SMA1	YPL027W	OCA4	P25366	362 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	DMC1	P25453	334 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
SMA1	YPL027W	VPS17	P32913	551 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	ARC19	P33204	171 aa	Known RBP	5.2	□□□□□ -1.58
SMA1	YPL027W	BUD16	P39988	312 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	SCS2	P40075	244 aa	Known RBP	5.2	□□□□□ -1.58
SMA1	YPL027W	PIG2	P40187	538 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	ATF1	P40353	525 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	SSU1	P41930	458 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	FHN1	P53279	174 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	ARP5	P53946	755 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	YMR210W	Q03649	449 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	AIM32	Q04689	311 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	SNO4	Q04902	237 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	HSP33	Q08914	237 aa	Known RBP	5.2	□□□□□ -1.58
SMA1	YPL027W	PCL8	Q08966	492 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	HSP32	Q08992	237 aa		5.2	□□□□□ -1.58
SMA1	YPL027W	CPA2	P03965	1118 aa	Known RBP	5.19	□□□□□ -1.58
SMA1	YPL027W	CTT1	P06115	562 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	MRPL25	P23369	157 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	IMG2	P25642	146 aa	Predicted RBP	5.19	□□□□□ -1.58
SMA1	YPL027W	GLG1	P36143	616 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	FAT1	P38225	669 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	IFA38	P38286	347 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	CTM1	P38818	585 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	SWD1	P39706	426 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	SSP120	P39931	234 aa	Known RBP	5.19	□□□□□ -1.58
SMA1	YPL027W	LTP1	P40347	161 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	SPO22	P40511	975 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	VPS73	P53142	486 aa	Known RBP	5.19	□□□□□ -1.58
SMA1	YPL027W	SGF73	P53165	657 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	VPS75	P53853	264 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	RSF1	Q05043	376 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	TFC6	Q06339	672 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	THI22	Q06490	572 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	MCP2	Q06567	569 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	RIX7	Q07844	837 aa	Known RBP	5.19	□□□□□ -1.58
SMA1	YPL027W	MLH3	Q12083	715 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	RTC5	Q12108	567 aa	Known RBP	5.19	□□□□□ -1.58
SMA1	YPL027W	USV1	Q12132	391 aa		5.19	□□□□□ -1.58
SMA1	YPL027W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
SMA1	YPL027W	RPB2	P08518	1224 aa	Known RBP	5.18	□□□□□ -1.58
SMA1	YPL027W	ADH4	P10127	382 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	BET2	P20133	325 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	PEP3	P27801	918 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	BCS1	P32839	456 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	COY1	P34237	679 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	GCS1	P35197	352 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	GND1	P38720	489 aa	Known RBP	5.18	□□□□□ -1.58
SMA1	YPL027W	BEM4	P39011	633 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	YJR061W	P40355	935 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	EPL1	P43572	832 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	AIP1	P46680	615 aa	Known RBP	5.18	□□□□□ -1.58
SMA1	YPL027W	BPL1	P48445	690 aa	Predicted RBP	5.18	□□□□□ -1.58
SMA1	YPL027W	RRT6	P53117	311 aa	Predicted RBP	5.18	□□□□□ -1.58
SMA1	YPL027W	DUO1	P53168	247 aa	Known RBP	5.18	□□□□□ -1.58
SMA1	YPL027W	TOF1	P53840	1238 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	ATG4	P53867	494 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	RBA50	Q04418	439 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	ERB1	Q04660	807 aa	Known RBP	5.18	□□□□□ -1.58
SMA1	YPL027W	VPS36	Q06696	566 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	IWR1	Q07532	353 aa	Predicted RBP	5.18	□□□□□ -1.58
SMA1	YPL027W	POM34	Q12445	299 aa		5.18	□□□□□ -1.58
SMA1	YPL027W	RPS9B	P05755	195 aa	Known RBP	5.17	□□□□□ -1.58
SMA1	YPL027W	TPK1	P06244	397 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	YML002W	P0CF17	737 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	FRS1	P15624	595 aa	Known RBP	5.17	□□□□□ -1.58
SMA1	YPL027W	PET127	P32606	800 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	DAD2	P36162	133 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	SIF2	P38262	535 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	PEX18	P38855	283 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	STT3	P39007	718 aa	Known RBP	5.17	□□□□□ -1.58
SMA1	YPL027W	THI6	P41835	540 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	RPN14	P53196	417 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	VBA4	Q04602	768 aa	Known RBP	5.17	□□□□□ -1.58
SMA1	YPL027W	YLR407W	Q06070	228 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	CTI6	Q08923	506 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	RCN2	Q12044	265 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	CHS5	Q12114	671 aa	Known RBP	5.17	□□□□□ -1.58
SMA1	YPL027W	YBR126W-A	Q8TGU7	68 aa		5.17	□□□□□ -1.58
SMA1	YPL027W	CDC24	P11433	854 aa	Predicted RBP	5.16	□□□□□ -1.58
SMA1	YPL027W	ABF1	P14164	731 aa		5.16	□□□□□ -1.58
SMA1	YPL027W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
SMA1	YPL027W	CLB1	P24868	471 aa		5.16	□□□□□ -1.58
SMA1	YPL027W	CLB3	P24870	427 aa		5.16	□□□□□ -1.58
SMA1	YPL027W	PHO84	P25297	587 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms