RNA–Protein interactions for RNA: YOR149C

SMP3, Transcript of Alpha 1,2-mannosyltransferase, yeast

Gene SMP3, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP3	YOR149C	CRF1	Q04930	467 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	YFT2	Q06676	274 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	YDL073W	Q07454	984 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	FMP45	Q07651	309 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	SPE3	Q12074	293 aa	Known RBP	4.2	□□□□□ -1.74
SMP3	YOR149C	ATG29	Q12092	213 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	GPM3	Q12326	303 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	TRM11	Q12463	433 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	SKS1	Q12505	502 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	YOR019W	Q99248	730 aa		4.2	□□□□□ -1.74
SMP3	YOR149C	HIS5	P07172	385 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	CPR2	P23285	205 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	SPB1	P25582	841 aa	Predicted RBP	4.19	□□□□□ -1.74
SMP3	YOR149C	YIH1	P25637	258 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	MSP1	P28737	362 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	COQ2	P32378	372 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	CST26	P38226	397 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	YHR054C	P38780	354 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	REV7	P38927	245 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	TMN3	P40071	706 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	PIG2	P40187	538 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	LRO1	P40345	661 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	CCT7	P42943	550 aa	Known RBP	4.19	□□□□□ -1.74
SMP3	YOR149C	VID30	P53076	958 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	ROY1	Q04847	553 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	ATG23	Q06671	453 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	KEL3	Q08979	651 aa	Predicted RBP	4.19	□□□□□ -1.74
SMP3	YOR149C	CTF3	Q12748	733 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	YPT6	Q99260	215 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	INO80	P53115	1489 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	CLC1	P17891	233 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	EMC1	P25574	760 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	FEN2	P25621	512 aa	Known RBP	4.19	□□□□□ -1.74
SMP3	YOR149C	URK1	P27515	501 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	URA7	P28274	579 aa	Known RBP	4.19	□□□□□ -1.74
SMP3	YOR149C	NTH1	P32356	751 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	YJL206C	P39529	758 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	ATF1	P40353	525 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	NCS6	P53088	359 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	EFR3	Q03653	782 aa	Known RBP	4.19	□□□□□ -1.74
SMP3	YOR149C	VPS38	Q05919	439 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	BUD7	Q08754	746 aa		4.19	□□□□□ -1.74
SMP3	YOR149C	AI1	P03875	834 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	LAT1	P12695	482 aa	Known RBP	4.18	□□□□□ -1.74
SMP3	YOR149C	PDE1	P22434	369 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	VMA16	P23968	213 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	PHO84	P25297	587 aa	Known RBP	4.18	□□□□□ -1.74
SMP3	YOR149C	LRE1	P25579	583 aa	Known RBP	4.18	□□□□□ -1.74
SMP3	YOR149C	YCR015C	P25616	317 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	YCR061W	P25639	631 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	SRB5	P32585	307 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	EFM4	P40516	257 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	CTR1	P49573	406 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	YNL058C	P53947	316 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	MAK10	Q02197	733 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	YLR456W	Q06199	204 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	NPC2	Q12408	173 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	AVL9	Q12500	764 aa		4.18	□□□□□ -1.74
SMP3	YOR149C	YML133C	Q03099	1374 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	YLL067C	Q07888	1374 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	YLL066C	Q99208	1374 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SMP3	YOR149C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SMP3	YOR149C	SYN8	P31377	255 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	GYP6	P32806	458 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	CMC1	P36064	111 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	DAD2	P36162	133 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	YHR218W	P38899	603 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	RTT105	P40063	208 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	PKP1	P40530	394 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	CAK1	P43568	368 aa	Predicted RBP	4.17	□□□□□ -1.74
SMP3	YOR149C	LSB3	P43603	459 aa	Known RBP	4.17	□□□□□ -1.74
SMP3	YOR149C	PRY1	P47032	299 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	CTH1	P47976	325 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	TCB2	P48231	1178 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	MNP1	P53163	194 aa	Predicted RBP	4.17	□□□□□ -1.74
SMP3	YOR149C	MTL1	P53214	551 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	YGR054W	P53235	642 aa	Known RBP	4.17	□□□□□ -1.74
SMP3	YOR149C	TOF1	P53840	1238 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	KAP120	Q02932	1032 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	ROT1	Q03691	256 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	RQC1	Q05468	723 aa	Known RBP	4.17	□□□□□ -1.74
SMP3	YOR149C	MRD1	Q06106	887 aa	Known RBP	4.17	□□□□□ -1.74
SMP3	YOR149C	ARR3	Q06598	404 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	MLH2	Q07980	695 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	FRE5	Q08908	694 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	CFT2	Q12102	859 aa	Predicted RBP	4.17	□□□□□ -1.74
SMP3	YOR149C	RPN5	Q12250	445 aa	Known RBP	4.17	□□□□□ -1.74
SMP3	YOR149C	SPE4	Q12455	300 aa		4.17	□□□□□ -1.74
SMP3	YOR149C	GAL80	P04387	435 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	EST1	P17214	699 aa	Predicted RBP	4.16	□□□□□ -1.74
SMP3	YOR149C	CAD1	P24813	409 aa	Known RBP	4.16	□□□□□ -1.74
SMP3	YOR149C	ERV1	P27882	189 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	BCS1	P32839	456 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	LOT5	P34234	306 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	SIF2	P38262	535 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	GND1	P38720	489 aa	Known RBP	4.16	□□□□□ -1.74
SMP3	YOR149C	YHR097C	P38809	366 aa	Known RBP	4.16	□□□□□ -1.74
SMP3	YOR149C	NUP60	P39705	539 aa		4.16	□□□□□ -1.74
SMP3	YOR149C	SEC24	P40482	926 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms