RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C INN1P53901 409 aa3.56□□□□□ -1.84
VPS9YML097C UBP16Q02863 499 aa3.56□□□□□ -1.84
VPS9YML097C MUB1Q03162 620 aa3.56□□□□□ -1.84
VPS9YML097C YML119WQ03208 357 aa3.56□□□□□ -1.84
VPS9YML097C YML037CQ03703 340 aa3.56□□□□□ -1.84
VPS9YML097C USA1Q03714 838 aa3.56□□□□□ -1.84
VPS9YML097C YML053CQ04978 212 aa3.56□□□□□ -1.84
VPS9YML097C SKG3Q06315 1026 aa3.56□□□□□ -1.84
VPS9YML097C YLR040CQ07988 224 aa3.56□□□□□ -1.84
VPS9YML097C TGS1Q12052 315 aa3.56□□□□□ -1.84
VPS9YML097C RTN2Q12443 393 aa3.56□□□□□ -1.84
VPS9YML097C YBR085C-AO43137 85 aa3.55□□□□□ -1.84
VPS9YML097C COX1P00401 534 aa3.55□□□□□ -1.84
VPS9YML097C PPR1P07272 904 aaPredicted RBP3.55□□□□□ -1.84
VPS9YML097C YML003WP0CF16 290 aa3.55□□□□□ -1.84
VPS9YML097C KAR3P17119 729 aa3.55□□□□□ -1.84
VPS9YML097C ROX1P25042 368 aa3.55□□□□□ -1.84
VPS9YML097C HCM1P25364 564 aa3.55□□□□□ -1.84
VPS9YML097C RPC53P25441 422 aa3.55□□□□□ -1.84
VPS9YML097C LRE1P25579 583 aaKnown RBP3.55□□□□□ -1.84
VPS9YML097C CDC15P27636 974 aa3.55□□□□□ -1.84
VPS9YML097C CNE1P27825 502 aa3.55□□□□□ -1.84
VPS9YML097C ERG3P32353 365 aa3.55□□□□□ -1.84
VPS9YML097C LOT5P34234 306 aa3.55□□□□□ -1.84
VPS9YML097C YJL206CP39529 758 aa3.55□□□□□ -1.84
VPS9YML097C BUD16P39988 312 aa3.55□□□□□ -1.84
VPS9YML097C SEC24P40482 926 aaKnown RBP3.55□□□□□ -1.84
VPS9YML097C MAF1P41910 395 aa3.55□□□□□ -1.84
VPS9YML097C YGL036WP53185 909 aaPredicted RBP3.55□□□□□ -1.84
VPS9YML097C ATG4P53867 494 aa3.55□□□□□ -1.84
VPS9YML097C RIA1P53893 1110 aa3.55□□□□□ -1.84
VPS9YML097C SSL2Q00578 843 aa3.55□□□□□ -1.84
VPS9YML097C NGL2Q03264 515 aaKnown RBP3.55□□□□□ -1.84
VPS9YML097C YDR109CQ04585 715 aa3.55□□□□□ -1.84
VPS9YML097C CRN1Q06440 651 aa3.55□□□□□ -1.84
VPS9YML097C PRS5Q12265 496 aaKnown RBP3.55□□□□□ -1.84
VPS9YML097C SFI1Q12369 946 aa3.55□□□□□ -1.84
VPS9YML097C YBR255C-AQ3E776 120 aa3.55□□□□□ -1.84
VPS9YML097C AI5_ALPHAQ9ZZX1 630 aa3.55□□□□□ -1.84
VPS9YML097C PDX1P16451 410 aa3.54□□□□□ -1.84
VPS9YML097C STE4P18851 423 aa3.54□□□□□ -1.84
VPS9YML097C AMD2P22580 549 aa3.54□□□□□ -1.84
VPS9YML097C SRB5P32585 307 aa3.54□□□□□ -1.84
VPS9YML097C AUR1P36107 401 aaPredicted RBP3.54□□□□□ -1.84
VPS9YML097C RFC1P38630 861 aaKnown RBP3.54□□□□□ -1.84
VPS9YML097C PIH1P38768 344 aa3.54□□□□□ -1.84
VPS9YML097C UTP9P38882 575 aaKnown RBP3.54□□□□□ -1.84
VPS9YML097C AXL1P40851 1208 aa3.54□□□□□ -1.84
VPS9YML097C NPA3P47122 385 aa3.54□□□□□ -1.84
VPS9YML097C LYS4P49367 693 aaPredicted RBP3.54□□□□□ -1.84
VPS9YML097C AAT1Q01802 451 aa3.54□□□□□ -1.84
VPS9YML097C RPS15Q01855 142 aaKnown RBP3.54□□□□□ -1.84
VPS9YML097C GTB1Q04924 702 aa3.54□□□□□ -1.84
VPS9YML097C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
VPS9YML097C NMD4Q12129 218 aa3.54□□□□□ -1.84
VPS9YML097C NTO1Q12311 748 aa3.54□□□□□ -1.84
VPS9YML097C PNS1Q12412 539 aa3.54□□□□□ -1.84
VPS9YML097C ISA2Q12425 185 aa3.54□□□□□ -1.84
VPS9YML097C PGA3Q12746 312 aaKnown RBP3.54□□□□□ -1.84
VPS9YML097C LCB1P25045 558 aaKnown RBP3.53□□□□□ -1.84
VPS9YML097C GPI10P30777 616 aa3.53□□□□□ -1.84
VPS9YML097C RPF2P36160 344 aaKnown RBP3.53□□□□□ -1.84
VPS9YML097C LSM5P40089 93 aaKnown RBP3.53□□□□□ -1.84
VPS9YML097C ARG2P40360 574 aa3.53□□□□□ -1.84
VPS9YML097C NDC80P40460 691 aa3.53□□□□□ -1.84
VPS9YML097C CTR1P49573 406 aa3.53□□□□□ -1.84
VPS9YML097C YGR250CP53316 781 aaKnown RBP3.53□□□□□ -1.84
VPS9YML097C BUD22Q04347 519 aaKnown RBP3.53□□□□□ -1.84
VPS9YML097C ATG23Q06671 453 aa3.53□□□□□ -1.84
VPS9YML097C SWA2Q06677 668 aa3.53□□□□□ -1.84
VPS9YML097C YDL242WQ07746 117 aa3.53□□□□□ -1.84
VPS9YML097C MDM20Q12387 796 aaKnown RBP3.53□□□□□ -1.84
VPS9YML097C CET1O13297 549 aaPredicted RBP3.52□□□□□ -1.85
VPS9YML097C EST1P17214 699 aaPredicted RBP3.52□□□□□ -1.85
VPS9YML097C GDA1P32621 518 aa3.52□□□□□ -1.85
VPS9YML097C NPL6P32832 435 aa3.52□□□□□ -1.85
VPS9YML097C ORC2P32833 620 aa3.52□□□□□ -1.85
VPS9YML097C GMH1P36125 273 aa3.52□□□□□ -1.85
VPS9YML097C GEX2P36173 615 aa3.52□□□□□ -1.85
VPS9YML097C UBP13P38187 747 aa3.52□□□□□ -1.85
VPS9YML097C YEL057CP39983 233 aa3.52□□□□□ -1.85
VPS9YML097C BUR6P40096 142 aa3.52□□□□□ -1.85
VPS9YML097C RGI2P40188 164 aa3.52□□□□□ -1.85
VPS9YML097C DJP1P40564 432 aa3.52□□□□□ -1.85
VPS9YML097C RPS7BP48164 190 aaKnown RBP3.52□□□□□ -1.85
VPS9YML097C ADE16P54113 591 aaKnown RBP3.52□□□□□ -1.85
VPS9YML097C YAT1P80235 687 aa3.52□□□□□ -1.85
VPS9YML097C RMT2Q03305 412 aa3.52□□□□□ -1.85
VPS9YML097C YDR179W-AQ03983 463 aa3.52□□□□□ -1.85
VPS9YML097C MRI1Q06489 411 aaKnown RBP3.52□□□□□ -1.85
VPS9YML097C YDL073WQ07454 984 aa3.52□□□□□ -1.85
VPS9YML097C PSR1Q07800 427 aa3.52□□□□□ -1.85
VPS9YML097C CRT10Q08226 957 aa3.52□□□□□ -1.85
VPS9YML097C YOL073CQ08232 322 aa3.52□□□□□ -1.85
VPS9YML097C GPN2Q08726 347 aaPredicted RBP3.52□□□□□ -1.85
VPS9YML097C BUD7Q08754 746 aa3.52□□□□□ -1.85
VPS9YML097C RIM20Q12033 661 aa3.52□□□□□ -1.85
VPS9YML097C AAC1P04710 309 aa3.51□□□□□ -1.85
VPS9YML097C RNR3P21672 869 aaKnown RBP3.51□□□□□ -1.85
VPS9YML097C CTS1P29029 562 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms