RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	TY2A-DR1	Q12392	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TY2A-OR1	Q12439	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	TY2A-DR3	Q99303	438 aa		4.75	□□□□□ -1.65
EBP2	YKL172W	YML003W	P0CF16	290 aa		4.74	□□□□□ -1.65
EBP2	YKL172W	PTP1	P25044	335 aa		4.74	□□□□□ -1.65
EBP2	YKL172W	MSS51	P32335	436 aa		4.74	□□□□□ -1.65
EBP2	YKL172W	GSH1	P32477	678 aa		4.74	□□□□□ -1.65
EBP2	YKL172W	TFC3	P34111	1160 aa		4.74	□□□□□ -1.65
EBP2	YKL172W	XBP1	P40489	647 aa		4.74	□□□□□ -1.65
EBP2	YKL172W	ORC5	P50874	479 aa		4.74	□□□□□ -1.65
EBP2	YKL172W	THI3	Q07471	609 aa		4.74	□□□□□ -1.65
EBP2	YKL172W	ERG27	Q12452	347 aa	Known RBP	4.74	□□□□□ -1.65
EBP2	YKL172W	RFA2	P26754	273 aa	Known RBP	4.73	□□□□□ -1.65
EBP2	YKL172W	CNS1	P33313	385 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	SLC1	P33333	303 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	EXO84	P38261	753 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	IMD2	P38697	523 aa	Known RBP	4.73	□□□□□ -1.65
EBP2	YKL172W	RIC1	P40395	1056 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	CIN1	P40987	1014 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	IMD3	P50095	523 aa	Known RBP	4.73	□□□□□ -1.65
EBP2	YKL172W	PSP1	P50896	841 aa	Known RBP	4.73	□□□□□ -1.65
EBP2	YKL172W	YML131W	Q03102	365 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	RSC9	Q03124	581 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	VID22	Q05934	901 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	STP3	Q05937	343 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	GET3	Q12154	354 aa	Known RBP	4.73	□□□□□ -1.65
EBP2	YKL172W	FRE7	Q12333	620 aa		4.73	□□□□□ -1.65
EBP2	YKL172W	CDC15	P27636	974 aa		4.72	□□□□□ -1.65
EBP2	YKL172W	COQ3	P27680	312 aa		4.72	□□□□□ -1.65
EBP2	YKL172W	SWA2	Q06677	668 aa		4.72	□□□□□ -1.65
EBP2	YKL172W	NEW1	Q08972	1196 aa	Known RBP	4.72	□□□□□ -1.65
EBP2	YKL172W	SNF1	P06782	633 aa	Known RBP	4.71	□□□□□ -1.66
EBP2	YKL172W	SUI3	P09064	285 aa	Known RBP	4.71	□□□□□ -1.66
EBP2	YKL172W	GEX2	P36173	615 aa		4.71	□□□□□ -1.66
EBP2	YKL172W	NET1	P47035	1189 aa		4.71	□□□□□ -1.66
EBP2	YKL172W	ADE16	P54113	591 aa	Known RBP	4.71	□□□□□ -1.66
EBP2	YKL172W	TMA16	Q08687	178 aa		4.71	□□□□□ -1.66
EBP2	YKL172W	NBP2	Q12163	236 aa		4.71	□□□□□ -1.66
EBP2	YKL172W	YLR302C	O13544	120 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	MRP2	P10663	115 aa	Predicted RBP	4.7	□□□□□ -1.66
EBP2	YKL172W	PCT1	P13259	424 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	MDM10	P18409	493 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	RER1	P25560	188 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	SSH4	P32343	579 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	RRN3	P36070	627 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	UBP7	P40453	1071 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	BNA1	P47096	177 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	VTC3	Q02725	835 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	OPY2	Q06810	360 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	NUS1	Q12063	375 aa		4.7	□□□□□ -1.66
EBP2	YKL172W	SRB5	P32585	307 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	LHS1	P36016	881 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	ARN1	P38731	627 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	ERV46	P39727	415 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	YER010C	P40011	234 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	TPA1	P40032	644 aa	Known RBP	4.69	□□□□□ -1.66
EBP2	YKL172W	MRX1	P40050	688 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	PFK26	P40433	827 aa	Known RBP	4.69	□□□□□ -1.66
EBP2	YKL172W	CFD1	P40558	293 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	VPS4	P52917	437 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	RRT6	P53117	311 aa	Predicted RBP	4.69	□□□□□ -1.66
EBP2	YKL172W	CRN1	Q06440	651 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	SSP2	Q08646	371 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	TRM8	Q12009	286 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	CRC1	Q12289	327 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	PCD1	Q12524	340 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	VCX1	Q99385	411 aa		4.69	□□□□□ -1.66
EBP2	YKL172W	YMR085W	P0CF18	432 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	YSP3	P25036	478 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	SOF1	P33750	489 aa	Known RBP	4.68	□□□□□ -1.66
EBP2	YKL172W	OCT1	P35999	772 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	AAP1	P37898	856 aa	Known RBP	4.68	□□□□□ -1.66
EBP2	YKL172W	JHD1	P40034	492 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	YJL107C	P42947	387 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	COP1	P53622	1201 aa	Known RBP	4.68	□□□□□ -1.66
EBP2	YKL172W	STP1	Q00947	519 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	FCP1	Q03254	732 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	YMR018W	Q04364	514 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	RCO1	Q04779	684 aa		4.68	□□□□□ -1.66
EBP2	YKL172W	YAP1	P19880	650 aa	Known RBP	4.67	□□□□□ -1.66
EBP2	YKL172W	TOM71	P38825	639 aa	Known RBP	4.67	□□□□□ -1.66
EBP2	YKL172W	SEC31	P38968	1273 aa	Known RBP	4.67	□□□□□ -1.66
EBP2	YKL172W	MNT3	P40549	630 aa		4.67	□□□□□ -1.66
EBP2	YKL172W	CDC1	P40986	491 aa		4.67	□□□□□ -1.66
EBP2	YKL172W	RPN11	P43588	306 aa	Known RBP	4.67	□□□□□ -1.66
EBP2	YKL172W	YPR003C	P53394	754 aa		4.67	□□□□□ -1.66
EBP2	YKL172W	REG1	Q00816	1014 aa		4.67	□□□□□ -1.66
EBP2	YKL172W	MCH4	Q08268	501 aa		4.67	□□□□□ -1.66
EBP2	YKL172W	TOP1	P04786	769 aa		4.66	□□□□□ -1.66
EBP2	YKL172W	GUK1	P15454	187 aa	Known RBP	4.66	□□□□□ -1.66
EBP2	YKL172W	CBF2	P32504	956 aa		4.66	□□□□□ -1.66
EBP2	YKL172W	NTR2	P36118	322 aa	Predicted RBP	4.66	□□□□□ -1.66
EBP2	YKL172W	SPC97	P38863	823 aa		4.66	□□□□□ -1.66
EBP2	YKL172W	YIL024C	P40543	189 aa		4.66	□□□□□ -1.66
EBP2	YKL172W	UBP8	P50102	471 aa		4.66	□□□□□ -1.66
EBP2	YKL172W	PDR8	Q06149	701 aa		4.66	□□□□□ -1.66
EBP2	YKL172W	AFT2	Q08957	416 aa		4.66	□□□□□ -1.66
EBP2	YKL172W	YLR049C	Q12110	428 aa		4.66	□□□□□ -1.66
EBP2	YKL172W	RPB2	P08518	1224 aa	Known RBP	4.65	□□□□□ -1.67
EBP2	YKL172W	SRP54	P20424	541 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms