RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C THI3Q07471 609 aa4.03□□□□□ -1.76
CTK2YJL006C GPN2Q08726 347 aaPredicted RBP4.03□□□□□ -1.76
CTK2YJL006C LEA1Q08963 238 aaPredicted RBP4.03□□□□□ -1.76
CTK2YJL006C YEF3P16521 1044 aaKnown RBP4.02□□□□□ -1.77
CTK2YJL006C MSH1P25846 959 aa4.02□□□□□ -1.77
CTK2YJL006C STT3P39007 718 aaKnown RBP4.02□□□□□ -1.77
CTK2YJL006C VPS64Q03944 604 aa4.02□□□□□ -1.77
CTK2YJL006C HIM1Q06674 414 aa4.02□□□□□ -1.77
CTK2YJL006C YLR112WQ12130 139 aa4.02□□□□□ -1.77
CTK2YJL006C SIR1P21691 654 aa4.01□□□□□ -1.77
CTK2YJL006C SIP1P32578 815 aa4.01□□□□□ -1.77
CTK2YJL006C FRD1P32614 470 aaKnown RBP4.01□□□□□ -1.77
CTK2YJL006C ERC1P38767 581 aa4.01□□□□□ -1.77
CTK2YJL006C VPS41P38959 992 aa4.01□□□□□ -1.77
CTK2YJL006C ARB1P40024 610 aaKnown RBP4.01□□□□□ -1.77
CTK2YJL006C TPA1P40032 644 aaKnown RBP4.01□□□□□ -1.77
CTK2YJL006C YPR003CP53394 754 aa4.01□□□□□ -1.77
CTK2YJL006C PAP2P53632 584 aaKnown RBP4.01□□□□□ -1.77
CTK2YJL006C MOT3P54785 490 aaKnown RBP4.01□□□□□ -1.77
CTK2YJL006C PIF1P07271 859 aa4□□□□□ -1.77
CTK2YJL006C MCM3P24279 971 aaKnown RBP4□□□□□ -1.77
CTK2YJL006C RPS7AP26786 190 aaKnown RBP4□□□□□ -1.77
CTK2YJL006C OCT1P35999 772 aa4□□□□□ -1.77
CTK2YJL006C MNN2P38069 597 aa4□□□□□ -1.77
CTK2YJL006C YBR139WP38109 508 aa4□□□□□ -1.77
CTK2YJL006C APM3P38153 483 aa4□□□□□ -1.77
CTK2YJL006C BZZ1P38822 633 aa4□□□□□ -1.77
CTK2YJL006C VPS27P40343 622 aaKnown RBP4□□□□□ -1.77
CTK2YJL006C TPM2P40414 161 aa4□□□□□ -1.77
CTK2YJL006C YGL036WP53185 909 aaPredicted RBP4□□□□□ -1.77
CTK2YJL006C IZH1Q03419 316 aa4□□□□□ -1.77
CTK2YJL006C EIS1Q05050 843 aaKnown RBP4□□□□□ -1.77
CTK2YJL006C AIM6Q07716 390 aa4□□□□□ -1.77
CTK2YJL006C TIP41Q12199 356 aa4□□□□□ -1.77
CTK2YJL006C POL3P15436 1097 aa3.99□□□□□ -1.77
CTK2YJL006C ACA1P39970 489 aa3.99□□□□□ -1.77
CTK2YJL006C CDC1P40986 491 aa3.99□□□□□ -1.77
CTK2YJL006C UBX4P54730 416 aa3.99□□□□□ -1.77
CTK2YJL006C IWR1Q07532 353 aaPredicted RBP3.99□□□□□ -1.77
CTK2YJL006C DED81P38707 554 aaKnown RBP3.98□□□□□ -1.77
CTK2YJL006C DHH1P39517 506 aaKnown RBP3.98□□□□□ -1.77
CTK2YJL006C SPC72P39723 622 aa3.98□□□□□ -1.77
CTK2YJL006C CAB2P40506 365 aa3.98□□□□□ -1.77
CTK2YJL006C CPR6P53691 371 aaKnown RBP3.98□□□□□ -1.77
CTK2YJL006C ESF2P53743 316 aaKnown RBP3.98□□□□□ -1.77
CTK2YJL006C ICL2Q12031 575 aa3.98□□□□□ -1.77
CTK2YJL006C MIS1P09440 975 aaKnown RBP3.97□□□□□ -1.77
CTK2YJL006C PGI1P12709 554 aaKnown RBP3.97□□□□□ -1.77
CTK2YJL006C PHO81P17442 1178 aa3.97□□□□□ -1.77
CTK2YJL006C NPA3P47122 385 aa3.97□□□□□ -1.77
CTK2YJL006C EAF7P53911 425 aaKnown RBP3.97□□□□□ -1.77
CTK2YJL006C ATG21Q02887 496 aa3.97□□□□□ -1.77
CTK2YJL006C PIG1Q06216 648 aa3.97□□□□□ -1.77
CTK2YJL006C POS5Q06892 414 aa3.97□□□□□ -1.77
CTK2YJL006C MCH4Q08268 501 aa3.97□□□□□ -1.77
CTK2YJL006C ADE3P07245 946 aaKnown RBP3.96□□□□□ -1.78
CTK2YJL006C BIK1P11709 440 aa3.96□□□□□ -1.78
CTK2YJL006C CDC23P16522 626 aa3.96□□□□□ -1.78
CTK2YJL006C RIT1P23796 513 aa3.96□□□□□ -1.78
CTK2YJL006C SWC3P31376 625 aa3.96□□□□□ -1.78
CTK2YJL006C RPT2P40327 437 aaKnown RBP3.96□□□□□ -1.78
CTK2YJL006C ASG1P40467 964 aa3.96□□□□□ -1.78
CTK2YJL006C UBP8P50102 471 aa3.96□□□□□ -1.78
CTK2YJL006C YPL108WQ02872 168 aaPredicted RBP3.96□□□□□ -1.78
CTK2YJL006C CAC2Q04199 468 aa3.96□□□□□ -1.78
CTK2YJL006C TAH18Q12181 623 aa3.96□□□□□ -1.78
CTK2YJL006C SWI4P25302 1093 aaKnown RBP3.95□□□□□ -1.78
CTK2YJL006C IMA1P53051 589 aa3.95□□□□□ -1.78
CTK2YJL006C RTS3P53289 263 aa3.95□□□□□ -1.78
CTK2YJL006C ESBP6P53918 673 aa3.95□□□□□ -1.78
CTK2YJL006C ARP9Q05123 467 aa3.95□□□□□ -1.78
CTK2YJL006C ECI1Q05871 280 aa3.95□□□□□ -1.78
CTK2YJL006C APL5Q08951 932 aaKnown RBP3.95□□□□□ -1.78
CTK2YJL006C YBR255C-AQ3E776 120 aa3.95□□□□□ -1.78
CTK2YJL006C PDE1P22434 369 aa3.94□□□□□ -1.78
CTK2YJL006C MSM1P22438 575 aa3.94□□□□□ -1.78
CTK2YJL006C LAC1P28496 418 aa3.94□□□□□ -1.78
CTK2YJL006C ARP2P32381 391 aaKnown RBP3.94□□□□□ -1.78
CTK2YJL006C PUG1P40100 303 aa3.94□□□□□ -1.78
CTK2YJL006C FAF1P40546 346 aaPredicted RBP3.94□□□□□ -1.78
CTK2YJL006C PSP1P50896 841 aaKnown RBP3.94□□□□□ -1.78
CTK2YJL006C YMR254CQ04838 102 aa3.94□□□□□ -1.78
CTK2YJL006C FRE3Q08905 711 aa3.94□□□□□ -1.78
CTK2YJL006C SUL2Q12325 893 aa3.94□□□□□ -1.78
CTK2YJL006C APA1P16550 321 aaKnown RBP3.93□□□□□ -1.78
CTK2YJL006C CLB4P24871 460 aa3.93□□□□□ -1.78
CTK2YJL006C YCR006CP25350 157 aa3.93□□□□□ -1.78
CTK2YJL006C YBR138CP38277 524 aa3.93□□□□□ -1.78
CTK2YJL006C FSH1P38777 243 aaKnown RBP3.93□□□□□ -1.78
CTK2YJL006C CRZ1P53968 678 aa3.93□□□□□ -1.78
CTK2YJL006C COX1P00401 534 aa3.92□□□□□ -1.78
CTK2YJL006C DBF20P32328 564 aa3.92□□□□□ -1.78
CTK2YJL006C PTH2P34222 208 aa3.92□□□□□ -1.78
CTK2YJL006C YRB30P53107 440 aaPredicted RBP3.92□□□□□ -1.78
CTK2YJL006C SWF1Q04629 336 aa3.92□□□□□ -1.78
CTK2YJL006C CIA1Q05583 330 aa3.92□□□□□ -1.78
CTK2YJL006C PET122P10355 254 aa3.91□□□□□ -1.78
CTK2YJL006C NCP1P16603 691 aaKnown RBP3.91□□□□□ -1.78
CTK2YJL006C URK1P27515 501 aa3.91□□□□□ -1.78
CTK2YJL006C SEC1P30619 724 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms