RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C STR3P53101 465 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C YNL247WP53852 767 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C VPS9P54787 451 aa8.22□□□□□ -1.09
SOD2YHR008C ARP4P80428 489 aa8.22□□□□□ -1.09
SOD2YHR008C RHO3Q00245 231 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C ENT5Q03769 411 aaKnown RBP8.22□□□□□ -1.09
SOD2YHR008C EMI1Q04406 187 aa8.22□□□□□ -1.09
SOD2YHR008C RRN11Q04712 507 aa8.22□□□□□ -1.09
SOD2YHR008C CWC2Q12046 339 aaPredicted RBP8.22□□□□□ -1.09
SOD2YHR008C SEY1Q99287 776 aa8.22□□□□□ -1.09
SOD2YHR008C GMH1P36125 273 aa8.21□□□□□ -1.1
SOD2YHR008C AIM18P38884 321 aa8.21□□□□□ -1.1
SOD2YHR008C CYC2P38909 366 aa8.21□□□□□ -1.1
SOD2YHR008C HXT8P40886 569 aa8.21□□□□□ -1.1
SOD2YHR008C ROK1P45818 564 aaPredicted RBP8.21□□□□□ -1.1
SOD2YHR008C CSN12P47130 423 aa8.21□□□□□ -1.1
SOD2YHR008C YMR1P47147 688 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
SOD2YHR008C RIM21P48565 533 aa8.21□□□□□ -1.1
SOD2YHR008C COG1P53079 417 aa8.21□□□□□ -1.1
SOD2YHR008C YGR111WP53265 400 aa8.21□□□□□ -1.1
SOD2YHR008C LDB18Q07887 179 aa8.21□□□□□ -1.1
SOD2YHR008C RRP12Q12754 1228 aaKnown RBP8.21□□□□□ -1.1
SOD2YHR008C AI5_ALPHAQ9ZZX1 630 aa8.21□□□□□ -1.1
SOD2YHR008C COX5AP00424 153 aa8.2□□□□□ -1.1
SOD2YHR008C EMC1P25574 760 aa8.2□□□□□ -1.1
SOD2YHR008C SKN1P33336 771 aa8.2□□□□□ -1.1
SOD2YHR008C YET1P35723 206 aa8.2□□□□□ -1.1
SOD2YHR008C EMC3P36039 253 aa8.2□□□□□ -1.1
SOD2YHR008C MIA40P36046 403 aa8.2□□□□□ -1.1
SOD2YHR008C YBR259WP38338 688 aa8.2□□□□□ -1.1
SOD2YHR008C ELO3P40319 345 aa8.2□□□□□ -1.1
SOD2YHR008C LRO1P40345 661 aa8.2□□□□□ -1.1
SOD2YHR008C YNL092WP53934 400 aa8.2□□□□□ -1.1
SOD2YHR008C REG1Q00816 1014 aa8.2□□□□□ -1.1
SOD2YHR008C RSF1Q05043 376 aa8.2□□□□□ -1.1
SOD2YHR008C TPO1Q07824 586 aa8.2□□□□□ -1.1
SOD2YHR008C GYP1Q08484 637 aa8.2□□□□□ -1.1
SOD2YHR008C RPC31P17890 251 aa8.19□□□□□ -1.1
SOD2YHR008C AEP1P32493 518 aa8.19□□□□□ -1.1
SOD2YHR008C PET309P32522 965 aaPredicted RBP8.19□□□□□ -1.1
SOD2YHR008C AIM26P32858 118 aa8.19□□□□□ -1.1
SOD2YHR008C MRS6P32864 603 aaKnown RBP8.19□□□□□ -1.1
SOD2YHR008C TFA2P36145 328 aa8.19□□□□□ -1.1
SOD2YHR008C CTP1P38152 299 aa8.19□□□□□ -1.1
SOD2YHR008C MIP6P38760 659 aaKnown RBP8.19□□□□□ -1.1
SOD2YHR008C LYS1P38998 373 aaRIP-Chip data8.19□□□□□ -1.1not detected
SOD2YHR008C ATM1P40416 690 aa8.19□□□□□ -1.1
SOD2YHR008C HST1P53685 503 aa8.19□□□□□ -1.1
SOD2YHR008C NEW1Q08972 1196 aaKnown RBP8.19□□□□□ -1.1
SOD2YHR008C SMF3Q12078 473 aaPredicted RBP8.19□□□□□ -1.1
SOD2YHR008C CPA1P07258 411 aaKnown RBP8.18□□□□□ -1.1
SOD2YHR008C GFA1P14742 717 aaKnown RBP8.18□□□□□ -1.1
SOD2YHR008C SEC23P15303 768 aaKnown RBP8.18□□□□□ -1.1
SOD2YHR008C HOP1P20050 605 aa8.18□□□□□ -1.1
SOD2YHR008C DBP2P24783 546 aaKnown RBP8.18□□□□□ -1.1
SOD2YHR008C PLC1P32383 869 aa8.18□□□□□ -1.1
SOD2YHR008C NRP1P32770 719 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
SOD2YHR008C DOM34P33309 386 aa8.18□□□□□ -1.1
SOD2YHR008C PHO11P35842 467 aa8.18□□□□□ -1.1
SOD2YHR008C YHR033WP38690 423 aa8.18□□□□□ -1.1
SOD2YHR008C PHO12P38693 467 aa8.18□□□□□ -1.1
SOD2YHR008C DBP8P38719 431 aa8.18□□□□□ -1.1
SOD2YHR008C RFX1P48743 811 aa8.18□□□□□ -1.1
SOD2YHR008C NNF2P53253 936 aa8.18□□□□□ -1.1
SOD2YHR008C PFA4Q12006 378 aa8.18□□□□□ -1.1
SOD2YHR008C CMR1Q12510 522 aaKnown RBP8.18□□□□□ -1.1
SOD2YHR008C MDM35O60200 86 aa8.17□□□□□ -1.1
SOD2YHR008C CDC9P04819 755 aa8.17□□□□□ -1.1
SOD2YHR008C RPL17AP05740 184 aaKnown RBP8.17□□□□□ -1.1
SOD2YHR008C ILS1P09436 1072 aaKnown RBP8.17□□□□□ -1.1
SOD2YHR008C DCC1P25559 380 aa8.17□□□□□ -1.1
SOD2YHR008C IMG1P25626 169 aa8.17□□□□□ -1.1
SOD2YHR008C YHL008CP38750 627 aa8.17□□□□□ -1.1
SOD2YHR008C BDH2P39713 417 aa8.17□□□□□ -1.1
SOD2YHR008C RGD2P43556 714 aa8.17□□□□□ -1.1
SOD2YHR008C RPL17BP46990 184 aaKnown RBP8.17□□□□□ -1.1
SOD2YHR008C TAD1P53065 400 aa8.17□□□□□ -1.1
SOD2YHR008C YGR127WP53275 312 aa8.17□□□□□ -1.1
SOD2YHR008C MSH6Q03834 1242 aa8.17□□□□□ -1.1
SOD2YHR008C ARX1Q03862 593 aaKnown RBP8.17□□□□□ -1.1
SOD2YHR008C GSF2Q04697 403 aaKnown RBP8.17□□□□□ -1.1
SOD2YHR008C BCY1P07278 416 aaKnown RBP8.16□□□□□ -1.1
SOD2YHR008C PDR1P12383 1068 aa8.16□□□□□ -1.1
SOD2YHR008C TUP1P16649 713 aa8.16□□□□□ -1.1
SOD2YHR008C URA4P20051 364 aa8.16□□□□□ -1.1
SOD2YHR008C YSR3P23501 404 aa8.16□□□□□ -1.1
SOD2YHR008C YCL042WP25572 119 aa8.16□□□□□ -1.1
SOD2YHR008C MSH1P25846 959 aa8.16□□□□□ -1.1
SOD2YHR008C GDA1P32621 518 aa8.16□□□□□ -1.1
SOD2YHR008C ALA1P40825 983 aaKnown RBP8.16□□□□□ -1.1
SOD2YHR008C TIM13P53299 105 aa8.16□□□□□ -1.1
SOD2YHR008C ARE2P53629 642 aaKnown RBP8.16□□□□□ -1.1
SOD2YHR008C RSC4Q02206 625 aa8.16□□□□□ -1.1
SOD2YHR008C CCE1Q03702 353 aa8.16□□□□□ -1.1
SOD2YHR008C ETT1Q08421 412 aaKnown RBP8.16□□□□□ -1.1
SOD2YHR008C BUD7Q08754 746 aa8.16□□□□□ -1.1
SOD2YHR008C DIN7Q12086 430 aa8.16□□□□□ -1.1
SOD2YHR008C APC11Q12157 165 aa8.16□□□□□ -1.1
SOD2YHR008C RPL7AP05737 244 aaKnown RBP8.15□□□□□ -1.1
SOD2YHR008C ADH7P25377 361 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms