RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	TY2A-GR2	P0CX62	438 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	CDC42	P19073	191 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	ARG1	P22768	420 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	TY2A-C	P25383	438 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	EFB1	P32471	206 aa	Known RBP	4.25	□□□□□ -1.73
PTR3	YFR029W	MTC7	P32633	139 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	MGM101	P32787	269 aa	Known RBP	4.25	□□□□□ -1.73
PTR3	YFR029W	YPT7	P32939	208 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	NNK1	P36003	928 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	CST26	P38226	397 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	COS111	P38308	924 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	MIP6	P38760	659 aa	Known RBP	4.25	□□□□□ -1.73
PTR3	YFR029W	STN1	P38960	494 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	DOT5	P40553	215 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	CHS6	P40955	746 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	LOC1	P43586	204 aa	Predicted RBP	4.25	□□□□□ -1.73
PTR3	YFR029W	GLO1	P50107	326 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	PAN2	P53010	1115 aa	Predicted RBP	4.25	□□□□□ -1.73
PTR3	YFR029W	CUZ1	P53899	274 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	INN1	P53901	409 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	YKR011C	Q02209	353 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	NGL2	Q03264	515 aa	Known RBP	4.25	□□□□□ -1.73
PTR3	YFR029W	TY2A-DR2	Q03483	438 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	SOV1	Q04748	898 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	TY2A-B	Q12260	438 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	TY2A-OR2	Q12293	438 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	SUL2	Q12325	893 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	TY2A-DR1	Q12392	438 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	TY2A-OR1	Q12439	438 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	ATG11	Q12527	1178 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	SEC39	Q12745	709 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	TY2A-DR3	Q99303	438 aa		4.25	□□□□□ -1.73
PTR3	YFR029W	FPS1	P23900	669 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	RPC82	P32349	654 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	TPO5	P36029	618 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	MSG5	P38590	489 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	YMR124W	P39523	943 aa	Known RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	JHD1	P40034	492 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	BUD8	P41698	603 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	TNA1	P53322	534 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	MNT4	P53745	580 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	RHO5	P53879	331 aa	Known RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	ARP5	P53946	755 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	ORC4	P54791	529 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	UBP2	Q01476	1272 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	DOT1	Q04089	582 aa	Known RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	UAF30	Q08747	228 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	RIM20	Q12033	661 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	TY1A-BL	Q12266	440 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	MRPL23	Q12487	163 aa	Predicted RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	SUP35	P05453	685 aa	Known RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	SAM35	P14693	329 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	CLC1	P17891	233 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	ERG8	P24521	451 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	ERG6	P25087	383 aa	Known RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	HSP104	P31539	908 aa	Known RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	RPD3	P32561	433 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	GPT2	P36148	743 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	MRPL36	P36531	177 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	RRT2	P38332	387 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	FSH1	P38777	243 aa	Known RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	CCT6	P39079	546 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	SSP120	P39931	234 aa	Known RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	GID8	P40208	455 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	MMM1	P41800	426 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	ASE1	P50275	885 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	CSL4	P53859	292 aa	Predicted RBP	4.24	□□□□□ -1.73
PTR3	YFR029W	VPS20	Q04272	221 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	RCO1	Q04779	684 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	TRI1	Q05024	226 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	CUR1	Q06469	252 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	YOR223W	Q12015	292 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	RBD2	Q12270	262 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	GIS3	Q12418	502 aa		4.24	□□□□□ -1.73
PTR3	YFR029W	LPD1	P09624	499 aa	Known RBP	4.23	□□□□□ -1.73
PTR3	YFR029W	SEF1	P34228	1148 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	ALY1	P36117	915 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	ECM4	P36156	370 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	YHL017W	P38745	532 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PTR3	YFR029W	SER3	P40054	469 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	YIL089W	P40500	205 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	CEP3	P40969	608 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	IAH1	P41734	238 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	SHR5	P41912	237 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	EFM3	P47163	339 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	MLC1	P53141	149 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	PIB2	P53191	635 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	TAM41	P53230	385 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	GIM3	P53900	129 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	MAK10	Q02197	733 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	YMR210W	Q03649	449 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	MRPL1	Q04599	285 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	ASM4	Q05166	528 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	STP3	Q05937	343 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	OPT2	Q06593	877 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	ARR1	Q06596	294 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	SYT1	Q06836	1226 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	VAM6	Q07468	1049 aa		4.23	□□□□□ -1.73
PTR3	YFR029W	PUS7	Q08647	676 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms