RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C MTG1Q03151 367 aaPredicted RBP2.88□□□□□ -1.95
SMB1YER029C TFC6Q06339 672 aa2.88□□□□□ -1.95
SMB1YER029C RVB2Q12464 471 aaKnown RBP2.88□□□□□ -1.95
SMB1YER029C RRI1Q12468 440 aa2.88□□□□□ -1.95
SMB1YER029C MIS1P09440 975 aaKnown RBP2.87□□□□□ -1.95
SMB1YER029C APA1P16550 321 aaKnown RBP2.87□□□□□ -1.95
SMB1YER029C LRE1P25579 583 aaKnown RBP2.87□□□□□ -1.95
SMB1YER029C RFA2P26754 273 aaKnown RBP2.87□□□□□ -1.95
SMB1YER029C MGM1P32266 881 aa2.87□□□□□ -1.95
SMB1YER029C ATO2P32907 282 aa2.87□□□□□ -1.95
SMB1YER029C OCT1P35999 772 aa2.87□□□□□ -1.95
SMB1YER029C FUN12P39730 1002 aaKnown RBP2.87□□□□□ -1.95
SMB1YER029C MDV1P47025 714 aa2.87□□□□□ -1.95
SMB1YER029C ARC35P53731 342 aaKnown RBP2.87□□□□□ -1.95
SMB1YER029C ATG21Q02887 496 aa2.87□□□□□ -1.95
SMB1YER029C MRPL1Q04599 285 aa2.87□□□□□ -1.95
SMB1YER029C STP3Q05937 343 aa2.87□□□□□ -1.95
SMB1YER029C PIG1Q06216 648 aa2.87□□□□□ -1.95
SMB1YER029C ATX2Q12067 313 aa2.87□□□□□ -1.95
SMB1YER029C BAG7Q12128 409 aa2.87□□□□□ -1.95
SMB1YER029C GPA1P08539 472 aa2.86□□□□□ -1.95
SMB1YER029C SWC3P31376 625 aa2.86□□□□□ -1.95
SMB1YER029C ACA1P39970 489 aa2.86□□□□□ -1.95
SMB1YER029C TAN1P53072 289 aaPredicted RBP2.86□□□□□ -1.95
SMB1YER029C TRS130Q03660 1102 aa2.86□□□□□ -1.95
SMB1YER029C CAC2Q04199 468 aa2.86□□□□□ -1.95
SMB1YER029C SCW10Q04951 389 aa2.86□□□□□ -1.95
SMB1YER029C PDR8Q06149 701 aa2.86□□□□□ -1.95
SMB1YER029C ATG23Q06671 453 aa2.86□□□□□ -1.95
SMB1YER029C YOL057WQ08225 711 aa2.86□□□□□ -1.95
SMB1YER029C YEF3P16521 1044 aaKnown RBP2.85□□□□□ -1.95
SMB1YER029C SRP54P20424 541 aaKnown RBP2.85□□□□□ -1.95
SMB1YER029C YCL049CP25577 312 aa2.85□□□□□ -1.95
SMB1YER029C MSH1P25846 959 aa2.85□□□□□ -1.95
SMB1YER029C DED81P38707 554 aaKnown RBP2.85□□□□□ -1.95
SMB1YER029C DJP1P40564 432 aa2.85□□□□□ -1.95
SMB1YER029C ZAP1P47043 880 aa2.85□□□□□ -1.95
SMB1YER029C UBX6P47049 396 aa2.85□□□□□ -1.95
SMB1YER029C YPT11P48559 417 aa2.85□□□□□ -1.95
SMB1YER029C CSL4P53859 292 aaPredicted RBP2.85□□□□□ -1.95
SMB1YER029C UBX4P54730 416 aa2.85□□□□□ -1.95
SMB1YER029C YDR109CQ04585 715 aa2.85□□□□□ -1.95
SMB1YER029C MLH2Q07980 695 aa2.85□□□□□ -1.95
SMB1YER029C MCH4Q08268 501 aa2.85□□□□□ -1.95
SMB1YER029C NDD1Q08887 554 aa2.85□□□□□ -1.95
SMB1YER029C YER145C-AA0A023PYF4 145 aa2.84□□□□□ -1.95
SMB1YER029C YFL068WP0CX99 160 aa2.84□□□□□ -1.95
SMB1YER029C YLL066W-AP0CY00 160 aa2.84□□□□□ -1.95
SMB1YER029C YLL067W-AP0CY01 160 aa2.84□□□□□ -1.95
SMB1YER029C MTF2P10849 440 aa2.84□□□□□ -1.95
SMB1YER029C CLB4P24871 460 aa2.84□□□□□ -1.95
SMB1YER029C YLR455WQ06188 304 aa2.84□□□□□ -1.95
SMB1YER029C SRL1Q08673 210 aa2.84□□□□□ -1.95
SMB1YER029C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SMB1YER029C PCD1Q12524 340 aa2.84□□□□□ -1.95
SMB1YER029C RPL42AP0CX27 106 aaKnown RBP2.83□□□□□ -1.96
SMB1YER029C RPL42BP0CX28 106 aaKnown RBP2.83□□□□□ -1.96
SMB1YER029C MSM1P22438 575 aa2.83□□□□□ -1.96
SMB1YER029C STE50P25344 346 aa2.83□□□□□ -1.96
SMB1YER029C YCR043CP25361 127 aa2.83□□□□□ -1.96
SMB1YER029C MSS51P32335 436 aa2.83□□□□□ -1.96
SMB1YER029C ADE17P38009 592 aaKnown RBP2.83□□□□□ -1.96
SMB1YER029C LEU5P38702 357 aa2.83□□□□□ -1.96
SMB1YER029C VPS27P40343 622 aaKnown RBP2.83□□□□□ -1.96
SMB1YER029C YIR016WP40572 265 aa2.83□□□□□ -1.96
SMB1YER029C RRT6P53117 311 aaPredicted RBP2.83□□□□□ -1.96
SMB1YER029C YGL036WP53185 909 aaPredicted RBP2.83□□□□□ -1.96
SMB1YER029C PAP2P53632 584 aaKnown RBP2.83□□□□□ -1.96
SMB1YER029C ASI1P54074 624 aa2.83□□□□□ -1.96
SMB1YER029C ECM22Q05958 814 aaPredicted RBP2.83□□□□□ -1.96
SMB1YER029C DSE3Q08729 430 aa2.83□□□□□ -1.96
SMB1YER029C SWT1Q12104 458 aa2.83□□□□□ -1.96
SMB1YER029C UBX3Q12229 455 aa2.83□□□□□ -1.96
SMB1YER029C NYV1Q12255 253 aa2.83□□□□□ -1.96
SMB1YER029C CHO1P08456 276 aa2.82□□□□□ -1.96
SMB1YER029C PGI1P12709 554 aaKnown RBP2.82□□□□□ -1.96
SMB1YER029C PHO81P17442 1178 aa2.82□□□□□ -1.96
SMB1YER029C UBP13P38187 747 aa2.82□□□□□ -1.96
SMB1YER029C ARC40P38328 384 aaKnown RBP2.82□□□□□ -1.96
SMB1YER029C PCL6P40038 420 aa2.82□□□□□ -1.96
SMB1YER029C SKP2P42843 763 aa2.82□□□□□ -1.96
SMB1YER029C SWP82P43554 623 aa2.82□□□□□ -1.96
SMB1YER029C YNL144CP53907 740 aa2.82□□□□□ -1.96
SMB1YER029C ARP9Q05123 467 aa2.82□□□□□ -1.96
SMB1YER029C YMR034CQ05131 434 aaPredicted RBP2.82□□□□□ -1.96
SMB1YER029C SNA4Q07549 140 aa2.82□□□□□ -1.96
SMB1YER029C GSH2Q08220 491 aa2.82□□□□□ -1.96
SMB1YER029C BUD7Q08754 746 aa2.82□□□□□ -1.96
SMB1YER029C FRE3Q08905 711 aa2.82□□□□□ -1.96
SMB1YER029C PET111P08468 800 aa2.81□□□□□ -1.96
SMB1YER029C TY2A-LR1P0C2J4 438 aa2.81□□□□□ -1.96
SMB1YER029C TY2A-FP0CX61 438 aa2.81□□□□□ -1.96
SMB1YER029C TY2A-GR2P0CX62 438 aa2.81□□□□□ -1.96
SMB1YER029C UBC1P21734 215 aaKnown RBP2.81□□□□□ -1.96
SMB1YER029C TY2A-CP25383 438 aa2.81□□□□□ -1.96
SMB1YER029C GCD7P32502 381 aaPredicted RBP2.81□□□□□ -1.96
SMB1YER029C MNN2P38069 597 aa2.81□□□□□ -1.96
SMB1YER029C IFA38P38286 347 aa2.81□□□□□ -1.96
SMB1YER029C NPR3P38742 1146 aa2.81□□□□□ -1.96
SMB1YER029C ASG1P40467 964 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms