RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C GAT1P43574 510 aa3.57□□□□□ -1.84
VAB2YEL005C BPL1P48445 690 aaPredicted RBP3.57□□□□□ -1.84
VAB2YEL005C YRB30P53107 440 aaPredicted RBP3.57□□□□□ -1.84
VAB2YEL005C DCP2P53550 970 aaKnown RBP3.57□□□□□ -1.84
VAB2YEL005C SNU56Q03782 492 aaKnown RBP3.57□□□□□ -1.84
VAB2YEL005C BSP1Q06604 576 aa3.57□□□□□ -1.84
VAB2YEL005C TMA16Q08687 178 aa3.57□□□□□ -1.84
VAB2YEL005C NUS1Q12063 375 aa3.57□□□□□ -1.84
VAB2YEL005C BAG7Q12128 409 aa3.57□□□□□ -1.84
VAB2YEL005C SES1P07284 462 aaKnown RBP3.56□□□□□ -1.84
VAB2YEL005C RFA2P26754 273 aaKnown RBP3.56□□□□□ -1.84
VAB2YEL005C RRN3P36070 627 aa3.56□□□□□ -1.84
VAB2YEL005C KTR3P38130 404 aaPredicted RBP3.56□□□□□ -1.84
VAB2YEL005C VPS8P39702 1274 aa3.56□□□□□ -1.84
VAB2YEL005C SNO3P43544 222 aa3.56□□□□□ -1.84
VAB2YEL005C PSP1P50896 841 aaKnown RBP3.56□□□□□ -1.84
VAB2YEL005C CSL4P53859 292 aaPredicted RBP3.56□□□□□ -1.84
VAB2YEL005C CBK1P53894 756 aa3.56□□□□□ -1.84
VAB2YEL005C SEG1Q04279 960 aa3.56□□□□□ -1.84
VAB2YEL005C SPN1Q06505 410 aaPredicted RBP3.56□□□□□ -1.84
VAB2YEL005C SWA2Q06677 668 aa3.56□□□□□ -1.84
VAB2YEL005C OPY2Q06810 360 aa3.56□□□□□ -1.84
VAB2YEL005C LEA1Q08963 238 aaPredicted RBP3.56□□□□□ -1.84
VAB2YEL005C TRM8Q12009 286 aa3.56□□□□□ -1.84
VAB2YEL005C GUK1P15454 187 aaKnown RBP3.55□□□□□ -1.84
VAB2YEL005C APN1P22936 367 aa3.55□□□□□ -1.84
VAB2YEL005C PRE8P23639 250 aa3.55□□□□□ -1.84
VAB2YEL005C LHS1P36016 881 aa3.55□□□□□ -1.84
VAB2YEL005C YER010CP40011 234 aa3.55□□□□□ -1.84
VAB2YEL005C MRX1P40050 688 aa3.55□□□□□ -1.84
VAB2YEL005C SAE2P46946 345 aa3.55□□□□□ -1.84
VAB2YEL005C ERG13P54839 491 aaKnown RBP3.55□□□□□ -1.84
VAB2YEL005C REG1Q00816 1014 aa3.55□□□□□ -1.84
VAB2YEL005C RIM13Q03792 727 aa3.55□□□□□ -1.84
VAB2YEL005C THI3Q07471 609 aa3.55□□□□□ -1.84
VAB2YEL005C PRS5Q12265 496 aaKnown RBP3.55□□□□□ -1.84
VAB2YEL005C PGK1P00560 416 aaKnown RBP3.54□□□□□ -1.84
VAB2YEL005C RGT1P32862 1170 aa3.54□□□□□ -1.84
VAB2YEL005C SOF1P33750 489 aaKnown RBP3.54□□□□□ -1.84
VAB2YEL005C VID27P40157 782 aa3.54□□□□□ -1.84
VAB2YEL005C IRC7P43623 340 aa3.54□□□□□ -1.84
VAB2YEL005C ORC5P50874 479 aa3.54□□□□□ -1.84
VAB2YEL005C CRN1Q06440 651 aa3.54□□□□□ -1.84
VAB2YEL005C YLR049CQ12110 428 aa3.54□□□□□ -1.84
VAB2YEL005C SKM1Q12469 655 aa3.54□□□□□ -1.84
VAB2YEL005C PCD1Q12524 340 aa3.54□□□□□ -1.84
VAB2YEL005C CET1O13297 549 aaPredicted RBP3.53□□□□□ -1.84
VAB2YEL005C MRP2P10663 115 aaPredicted RBP3.53□□□□□ -1.84
VAB2YEL005C PTP1P25044 335 aa3.53□□□□□ -1.84
VAB2YEL005C CHS3P29465 1165 aa3.53□□□□□ -1.84
VAB2YEL005C BUD16P39988 312 aa3.53□□□□□ -1.84
VAB2YEL005C UBP7P40453 1071 aa3.53□□□□□ -1.84
VAB2YEL005C MSY1P48527 492 aa3.53□□□□□ -1.84
VAB2YEL005C ADE16P54113 591 aaKnown RBP3.53□□□□□ -1.84
VAB2YEL005C RAD34Q06665 692 aa3.53□□□□□ -1.84
VAB2YEL005C YDL121CQ07541 149 aa3.53□□□□□ -1.84
VAB2YEL005C LYS21Q12122 440 aaKnown RBP3.53□□□□□ -1.84
VAB2YEL005C NKP1Q12493 238 aa3.53□□□□□ -1.84
VAB2YEL005C Q0010Q9ZZX9 128 aa3.53□□□□□ -1.84
VAB2YEL005C YML003WP0CF16 290 aa3.52□□□□□ -1.85
VAB2YEL005C GFD2P25370 566 aaKnown RBP3.52□□□□□ -1.85
VAB2YEL005C GSH1P32477 678 aa3.52□□□□□ -1.85
VAB2YEL005C AXL2P38928 823 aa3.52□□□□□ -1.85
VAB2YEL005C XBP1P40489 647 aa3.52□□□□□ -1.85
VAB2YEL005C NMD5P46970 1048 aa3.52□□□□□ -1.85
VAB2YEL005C BNA1P47096 177 aa3.52□□□□□ -1.85
VAB2YEL005C VPS4P52917 437 aa3.52□□□□□ -1.85
VAB2YEL005C RRT6P53117 311 aaPredicted RBP3.52□□□□□ -1.85
VAB2YEL005C BSC5P53755 489 aa3.52□□□□□ -1.85
VAB2YEL005C SNO4Q04902 237 aa3.52□□□□□ -1.85
VAB2YEL005C HSP33Q08914 237 aaKnown RBP3.52□□□□□ -1.85
VAB2YEL005C HSP32Q08992 237 aa3.52□□□□□ -1.85
VAB2YEL005C ENT1Q12518 454 aa3.52□□□□□ -1.85
VAB2YEL005C YOR111WQ99210 232 aa3.52□□□□□ -1.85
VAB2YEL005C ERG8P24521 451 aa3.51□□□□□ -1.85
VAB2YEL005C COQ3P27680 312 aa3.51□□□□□ -1.85
VAB2YEL005C MCM10P32354 571 aa3.51□□□□□ -1.85
VAB2YEL005C SRB5P32585 307 aa3.51□□□□□ -1.85
VAB2YEL005C SCO2P38072 301 aa3.51□□□□□ -1.85
VAB2YEL005C PHM8P40025 321 aa3.51□□□□□ -1.85
VAB2YEL005C LTP1P40347 161 aa3.51□□□□□ -1.85
VAB2YEL005C YJR061WP40355 935 aa3.51□□□□□ -1.85
VAB2YEL005C TMA108P40462 946 aa3.51□□□□□ -1.85
VAB2YEL005C ULP2P40537 1034 aaPredicted RBP3.51□□□□□ -1.85
VAB2YEL005C YNL144CP53907 740 aa3.51□□□□□ -1.85
VAB2YEL005C IDP3P53982 420 aaKnown RBP3.51□□□□□ -1.85
VAB2YEL005C RCO1Q04779 684 aa3.51□□□□□ -1.85
VAB2YEL005C BUD21Q08492 214 aaPredicted RBP3.51□□□□□ -1.85
VAB2YEL005C YLR111WQ12528 110 aa3.51□□□□□ -1.85
VAB2YEL005C VCX1Q99385 411 aa3.51□□□□□ -1.85
VAB2YEL005C YBR085C-AO43137 85 aa3.5□□□□□ -1.85
VAB2YEL005C HXK2P04807 486 aaKnown RBP3.5□□□□□ -1.85
VAB2YEL005C FUM1P08417 488 aaKnown RBP3.5□□□□□ -1.85
VAB2YEL005C YCR006CP25350 157 aa3.5□□□□□ -1.85
VAB2YEL005C MRP20P32387 263 aa3.5□□□□□ -1.85
VAB2YEL005C IMD2P38697 523 aaKnown RBP3.5□□□□□ -1.85
VAB2YEL005C CIN1P40987 1014 aa3.5□□□□□ -1.85
VAB2YEL005C PSA1P41940 361 aaKnown RBP3.5□□□□□ -1.85
VAB2YEL005C IMD3P50095 523 aaKnown RBP3.5□□□□□ -1.85
VAB2YEL005C TFC6Q06339 672 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 57 ms