RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C YCR051WP25631 222 aa6.16□□□□□ -1.42
MSS116YDR194C LSB3P43603 459 aaKnown RBP6.16□□□□□ -1.42
MSS116YDR194C CTH1P47976 325 aa6.16□□□□□ -1.42
MSS116YDR194C TCB2P48231 1178 aa6.16□□□□□ -1.42
MSS116YDR194C SEC5P89102 971 aa6.16□□□□□ -1.42
MSS116YDR194C RSF1Q05043 376 aa6.16□□□□□ -1.42
MSS116YDR194C TDA6Q06466 467 aa6.16□□□□□ -1.42
MSS116YDR194C FMP45Q07651 309 aa6.16□□□□□ -1.42
MSS116YDR194C BUD7Q08754 746 aa6.16□□□□□ -1.42
MSS116YDR194C TCO89Q08921 799 aa6.16□□□□□ -1.42
MSS116YDR194C YML003WP0CF16 290 aa6.15□□□□□ -1.42
MSS116YDR194C EMC1P25574 760 aa6.15□□□□□ -1.42
MSS116YDR194C MSS1P32559 526 aaPredicted RBP6.15□□□□□ -1.42
MSS116YDR194C KES1P35844 434 aaKnown RBP6.15□□□□□ -1.42
MSS116YDR194C BAP3P41815 604 aa6.15□□□□□ -1.42
MSS116YDR194C YGR066CP53242 292 aa6.15□□□□□ -1.42
MSS116YDR194C ORC3P54790 616 aa6.15□□□□□ -1.42
MSS116YDR194C YML037CQ03703 340 aa6.15□□□□□ -1.42
MSS116YDR194C ARX1Q03862 593 aaKnown RBP6.15□□□□□ -1.42
MSS116YDR194C LAS1P36146 502 aaPredicted RBP6.15□□□□□ -1.43
MSS116YDR194C FMO1P38866 432 aa6.15□□□□□ -1.43
MSS116YDR194C NUP60P39705 539 aa6.15□□□□□ -1.43
MSS116YDR194C EFM4P40516 257 aa6.15□□□□□ -1.43
MSS116YDR194C VPS62P53285 467 aa6.15□□□□□ -1.43
MSS116YDR194C NCS2P53923 493 aaPredicted RBP6.15□□□□□ -1.43
MSS116YDR194C PRS5Q12265 496 aaKnown RBP6.15□□□□□ -1.43
MSS116YDR194C GPM3Q12326 303 aa6.15□□□□□ -1.43
MSS116YDR194C LRE1P25579 583 aaKnown RBP6.14□□□□□ -1.43
MSS116YDR194C ERV1P27882 189 aa6.14□□□□□ -1.43
MSS116YDR194C SRB5P32585 307 aa6.14□□□□□ -1.43
MSS116YDR194C FTH1P38310 465 aa6.14□□□□□ -1.43
MSS116YDR194C YJL206CP39529 758 aa6.14□□□□□ -1.43
MSS116YDR194C SEC24P40482 926 aaKnown RBP6.14□□□□□ -1.43
MSS116YDR194C YFL066CP43538 392 aa6.14□□□□□ -1.43
MSS116YDR194C OCA1P50946 238 aaPredicted RBP6.14□□□□□ -1.43
MSS116YDR194C ROY1Q04847 553 aa6.14□□□□□ -1.43
MSS116YDR194C MRD1Q06106 887 aaKnown RBP6.14□□□□□ -1.43
MSS116YDR194C SPE3Q12074 293 aaKnown RBP6.14□□□□□ -1.43
MSS116YDR194C YDR215CQ12240 137 aa6.14□□□□□ -1.43
MSS116YDR194C YLR122CQ12312 125 aa6.14□□□□□ -1.43
MSS116YDR194C UIP5P36137 443 aa6.13□□□□□ -1.43
MSS116YDR194C POL12P38121 705 aaPredicted RBP6.13□□□□□ -1.43
MSS116YDR194C VMA13P41807 478 aaKnown RBP6.13□□□□□ -1.43
MSS116YDR194C YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
MSS116YDR194C LAT1P12695 482 aaKnown RBP6.13□□□□□ -1.43
MSS116YDR194C CPR2P23285 205 aa6.13□□□□□ -1.43
MSS116YDR194C ETP1P38748 585 aaKnown RBP6.13□□□□□ -1.43
MSS116YDR194C FKH2P41813 862 aa6.13□□□□□ -1.43
MSS116YDR194C FYV8P46949 817 aaKnown RBP6.13□□□□□ -1.43
MSS116YDR194C IMO32P53219 342 aa6.13□□□□□ -1.43
MSS116YDR194C RPA49Q01080 415 aaPredicted RBP6.13□□□□□ -1.43
MSS116YDR194C CHS5Q12114 671 aaKnown RBP6.13□□□□□ -1.43
MSS116YDR194C AFI1Q99222 893 aa6.13□□□□□ -1.43
MSS116YDR194C INO80P53115 1489 aa6.12□□□□□ -1.43
MSS116YDR194C TAT1P38085 619 aa6.12□□□□□ -1.43
MSS116YDR194C PIG2P40187 538 aa6.12□□□□□ -1.43
MSS116YDR194C EOS1P53938 366 aa6.12□□□□□ -1.43
MSS116YDR194C YNL058CP53947 316 aa6.12□□□□□ -1.43
MSS116YDR194C ERG5P54781 538 aa6.12□□□□□ -1.43
MSS116YDR194C GTB1Q04924 702 aa6.12□□□□□ -1.43
MSS116YDR194C DUS4Q06063 367 aa6.12□□□□□ -1.43
MSS116YDR194C ATG29Q12092 213 aa6.12□□□□□ -1.43
MSS116YDR194C REC107P21651 314 aa6.11□□□□□ -1.43
MSS116YDR194C PRP28P23394 588 aa6.11□□□□□ -1.43
MSS116YDR194C PAP1P29468 568 aaKnown RBP6.11□□□□□ -1.43
MSS116YDR194C SYN8P31377 255 aa6.11□□□□□ -1.43
MSS116YDR194C COQ2P32378 372 aa6.11□□□□□ -1.43
MSS116YDR194C MRPL7P36519 292 aa6.11□□□□□ -1.43
MSS116YDR194C CUL3P53202 744 aa6.11□□□□□ -1.43
MSS116YDR194C RPC11Q04307 110 aaPredicted RBP6.11□□□□□ -1.43
MSS116YDR194C VPS38Q05919 439 aa6.11□□□□□ -1.43
MSS116YDR194C ATG23Q06671 453 aa6.11□□□□□ -1.43
MSS116YDR194C NOP12Q08208 459 aaKnown RBP6.11□□□□□ -1.43
MSS116YDR194C GPN2Q08726 347 aaPredicted RBP6.11□□□□□ -1.43
MSS116YDR194C FRE5Q08908 694 aa6.11□□□□□ -1.43
MSS116YDR194C YBR085C-AO43137 85 aa6.11□□□□□ -1.43
MSS116YDR194C KAR4P25583 335 aa6.11□□□□□ -1.43
MSS116YDR194C SMI1P32566 505 aa6.11□□□□□ -1.43
MSS116YDR194C HEL1P36113 551 aa6.11□□□□□ -1.43
MSS116YDR194C SIF2P38262 535 aa6.11□□□□□ -1.43
MSS116YDR194C GND1P38720 489 aaKnown RBP6.11□□□□□ -1.43
MSS116YDR194C PRP43P53131 767 aaKnown RBP6.11□□□□□ -1.43
MSS116YDR194C YGR035CP53222 116 aa6.11□□□□□ -1.43
MSS116YDR194C TOF1P53840 1238 aa6.11□□□□□ -1.43
MSS116YDR194C INA17Q02888 182 aa6.11□□□□□ -1.43
MSS116YDR194C RQC1Q05468 723 aaKnown RBP6.11□□□□□ -1.43
MSS116YDR194C MMR1Q06324 491 aa6.11□□□□□ -1.43
MSS116YDR194C IZH3Q07959 543 aa6.11□□□□□ -1.43
MSS116YDR194C YDL177CQ12257 170 aa6.11□□□□□ -1.43
MSS116YDR194C YBR255C-AQ3E776 120 aa6.11□□□□□ -1.43
MSS116YDR194C ERC1P38767 581 aa6.1□□□□□ -1.43
MSS116YDR194C ICP55P40051 511 aa6.1□□□□□ -1.43
MSS116YDR194C NAS2P40555 220 aa6.1□□□□□ -1.43
MSS116YDR194C CTK2P46962 323 aa6.1□□□□□ -1.43
MSS116YDR194C USA1Q03714 838 aa6.1□□□□□ -1.43
MSS116YDR194C ARD1P07347 238 aaPredicted RBP6.09□□□□□ -1.43
MSS116YDR194C YIH1P25637 258 aa6.09□□□□□ -1.43
MSS116YDR194C SWH1P35845 1188 aa6.09□□□□□ -1.43
MSS116YDR194C OTU2P38747 307 aaKnown RBP6.09□□□□□ -1.43
MSS116YDR194C ARO9P38840 513 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms