RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	PFA4	Q12006	378 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	LYS21	Q12122	440 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	RPS21B	Q3E754	87 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	GEA2	P39993	1459 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	YPK9	Q12697	1472 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	PDR15	Q04182	1529 aa	Known RBP	0.91	□□□□□ -2.26
SEC1	YDR164C	GDB1	Q06625	1536 aa		0.91	□□□□□ -2.26
SEC1	YDR164C	GAL4	P04386	881 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	VAS1	P07806	1104 aa	Known RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	YFL068W	P0CX99	160 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	YLL066W-A	P0CY00	160 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	YLL067W-A	P0CY01	160 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	COX11	P19516	300 aa	Known RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	PTP2	P29461	750 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	CDC5	P32562	705 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	GDA1	P32621	518 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	TIF3	P34167	436 aa	Known RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	KES1	P35844	434 aa	Known RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	OAF3	P36023	863 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	ARN1	P38731	627 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	YNG2	P38806	282 aa	Known RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	YND1	P40009	630 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	VPS27	P40343	622 aa	Known RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	UBP7	P40453	1071 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	UBP8	P50102	471 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	PSP1	P50896	841 aa	Known RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	CUL3	P53202	744 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	ARP5	P53946	755 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	PLM2	Q04383	521 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	ECM38	Q05902	660 aa	Predicted RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	MLC2	Q06580	163 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	CDC45	Q08032	650 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	BSC6	Q08280	497 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	HFI1	Q12060	488 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	RRP6	Q12149	733 aa	Known RBP	0.9	□□□□□ -2.26
SEC1	YDR164C	NKP1	Q12493	238 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	RMP1	Q12530	201 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	APM4	Q99186	491 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	DRS2	P39524	1355 aa		0.9	□□□□□ -2.26
SEC1	YDR164C	SRB8	P25648	1427 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	YOR1	P53049	1477 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	PDR5	P33302	1511 aa	Known RBP	0.9	□□□□□ -2.27
SEC1	YDR164C	THO2	P53552	1597 aa	Known RBP	0.9	□□□□□ -2.27
SEC1	YDR164C	SSK2	P53599	1579 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	ILV2	P07342	687 aa	Known RBP	0.9	□□□□□ -2.27
SEC1	YDR164C	MSS18	P08593	268 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	PMS1	P14242	873 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	CBS2	P14905	389 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	CLC1	P17891	233 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	ATP12	P22135	325 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	PRD1	P25375	712 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	IME2	P32581	645 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	DID4	P36108	232 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	CDS1	P38221	457 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	FAT1	P38225	669 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	EHT1	P38295	451 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	YHL041W	P38730	149 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	VID28	P40547	921 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	YGL082W	P53155	381 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	CEG1	Q01159	459 aa	Predicted RBP	0.9	□□□□□ -2.27
SEC1	YDR164C	ESP1	Q03018	1630 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	SKY1	Q03656	742 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	YHM2	Q04013	314 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	CSI1	Q04368	295 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	TMA64	Q04600	565 aa	Known RBP	0.9	□□□□□ -2.27
SEC1	YDR164C	PEX15	Q08215	383 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	ALE1	Q08548	619 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	YPR027C	Q12079	277 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	CSR2	Q12734	1121 aa		0.9	□□□□□ -2.27
SEC1	YDR164C	ATG2	P53855	1592 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	VPS13	Q07878	3144 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	RTC1	Q08281	1341 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	CHO2	P05374	869 aa	Known RBP	0.89	□□□□□ -2.27
SEC1	YDR164C	HMG2	P12684	1045 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	CDC26	P14724	124 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	RRP43	P25359	394 aa	Predicted RBP	0.89	□□□□□ -2.27
SEC1	YDR164C	DPB3	P27344	201 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	SEC65	P29478	273 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	DBF20	P32328	564 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	DGR2	P32330	852 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	MRS6	P32864	603 aa	Known RBP	0.89	□□□□□ -2.27
SEC1	YDR164C	YKL133C	P36066	463 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	NUP133	P36161	1157 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	OPY1	P38271	328 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	YBP1	P38315	674 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	SDH8	P38345	138 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	ERP2	P39704	215 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	NOC2	P39744	710 aa	Known RBP	0.89	□□□□□ -2.27
SEC1	YDR164C	SAP1	P39955	897 aa	Known RBP	0.89	□□□□□ -2.27
SEC1	YDR164C	VID27	P40157	782 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	RPT2	P40327	437 aa	Known RBP	0.89	□□□□□ -2.27
SEC1	YDR164C	HIS6	P40545	261 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	ERR3	P42222	437 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	MDR1	P53258	950 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	MOT3	P54785	490 aa	Known RBP	0.89	□□□□□ -2.27
SEC1	YDR164C	YML131W	Q03102	365 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	CIA1	Q05583	330 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	COG4	Q06096	861 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	NKP2	Q06162	153 aa		0.89	□□□□□ -2.27
SEC1	YDR164C	POS5	Q06892	414 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms