RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C YDR109CQ04585 715 aa3.54□□□□□ -1.84
UBX3YDL091C ECM22Q05958 814 aaPredicted RBP3.54□□□□□ -1.84
UBX3YDL091C PIG1Q06216 648 aa3.54□□□□□ -1.84
UBX3YDL091C RRP6Q12149 733 aaKnown RBP3.54□□□□□ -1.84
UBX3YDL091C PCT1P13259 424 aa3.53□□□□□ -1.84
UBX3YDL091C MSH1P25846 959 aa3.53□□□□□ -1.84
UBX3YDL091C SKP2P42843 763 aa3.53□□□□□ -1.84
UBX3YDL091C YNL144CP53907 740 aa3.53□□□□□ -1.84
UBX3YDL091C SNA4Q07549 140 aa3.53□□□□□ -1.84
UBX3YDL091C BUD7Q08754 746 aa3.53□□□□□ -1.84
UBX3YDL091C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
UBX3YDL091C YML003WP0CF16 290 aa3.52□□□□□ -1.85
UBX3YDL091C LRE1P25579 583 aaKnown RBP3.52□□□□□ -1.85
UBX3YDL091C SCO2P38072 301 aa3.52□□□□□ -1.85
UBX3YDL091C YBR138CP38277 524 aa3.52□□□□□ -1.85
UBX3YDL091C HIM1Q06674 414 aa3.52□□□□□ -1.85
UBX3YDL091C MLH2Q07980 695 aa3.52□□□□□ -1.85
UBX3YDL091C MCH4Q08268 501 aa3.52□□□□□ -1.85
UBX3YDL091C DSE3Q08729 430 aa3.52□□□□□ -1.85
UBX3YDL091C YSP3P25036 478 aa3.51□□□□□ -1.85
UBX3YDL091C GCD7P32502 381 aaPredicted RBP3.51□□□□□ -1.85
UBX3YDL091C GEX2P36173 615 aa3.51□□□□□ -1.85
UBX3YDL091C YHL041WP38730 149 aa3.51□□□□□ -1.85
UBX3YDL091C VPS27P40343 622 aaKnown RBP3.51□□□□□ -1.85
UBX3YDL091C ADE16P54113 591 aaKnown RBP3.51□□□□□ -1.85
UBX3YDL091C CAC2Q04199 468 aa3.51□□□□□ -1.85
UBX3YDL091C GSH2Q08220 491 aa3.51□□□□□ -1.85
UBX3YDL091C RFA2P26754 273 aaKnown RBP3.51□□□□□ -1.85
UBX3YDL091C PUG1P40100 303 aa3.51□□□□□ -1.85
UBX3YDL091C UBP8P50102 471 aa3.51□□□□□ -1.85
UBX3YDL091C TRS130Q03660 1102 aa3.51□□□□□ -1.85
UBX3YDL091C SWF1Q04629 336 aa3.51□□□□□ -1.85
UBX3YDL091C VAM6Q07468 1049 aa3.51□□□□□ -1.85
UBX3YDL091C YFL068WP0CX99 160 aa3.5□□□□□ -1.85
UBX3YDL091C YLL066W-AP0CY00 160 aa3.5□□□□□ -1.85
UBX3YDL091C YLL067W-AP0CY01 160 aa3.5□□□□□ -1.85
UBX3YDL091C MRP2P10663 115 aaPredicted RBP3.5□□□□□ -1.85
UBX3YDL091C YCR043CP25361 127 aa3.5□□□□□ -1.85
UBX3YDL091C EXO84P38261 753 aa3.5□□□□□ -1.85
UBX3YDL091C ARC40P38328 384 aaKnown RBP3.5□□□□□ -1.85
UBX3YDL091C ASG1P40467 964 aa3.5□□□□□ -1.85
UBX3YDL091C ZAP1P47043 880 aa3.5□□□□□ -1.85
UBX3YDL091C PAP2P53632 584 aaKnown RBP3.5□□□□□ -1.85
UBX3YDL091C GPA1P08539 472 aa3.49□□□□□ -1.85
UBX3YDL091C SUI3P09064 285 aaKnown RBP3.49□□□□□ -1.85
UBX3YDL091C CLB4P24871 460 aa3.49□□□□□ -1.85
UBX3YDL091C YCR006CP25350 157 aa3.49□□□□□ -1.85
UBX3YDL091C PCL6P40038 420 aa3.49□□□□□ -1.85
UBX3YDL091C TES1P41903 349 aaKnown RBP3.49□□□□□ -1.85
UBX3YDL091C ERR3P42222 437 aa3.49□□□□□ -1.85
UBX3YDL091C DCP2P53550 970 aaKnown RBP3.49□□□□□ -1.85
UBX3YDL091C STP3Q05937 343 aa3.49□□□□□ -1.85
UBX3YDL091C YLR455WQ06188 304 aa3.49□□□□□ -1.85
UBX3YDL091C FRE3Q08905 711 aa3.49□□□□□ -1.85
UBX3YDL091C SWT1Q12104 458 aa3.49□□□□□ -1.85
UBX3YDL091C SPO16P17122 198 aa3.48□□□□□ -1.85
UBX3YDL091C RPT2P40327 437 aaKnown RBP3.48□□□□□ -1.85
UBX3YDL091C FAF1P40546 346 aaPredicted RBP3.48□□□□□ -1.85
UBX3YDL091C VPS25P47142 202 aa3.48□□□□□ -1.85
UBX3YDL091C YGL036WP53185 909 aaPredicted RBP3.48□□□□□ -1.85
UBX3YDL091C YMR034CQ05131 434 aaPredicted RBP3.48□□□□□ -1.85
UBX3YDL091C POS5Q06892 414 aa3.48□□□□□ -1.85
UBX3YDL091C NYV1Q12255 253 aa3.48□□□□□ -1.85
UBX3YDL091C RPL42AP0CX27 106 aaKnown RBP3.47□□□□□ -1.85
UBX3YDL091C RPL42BP0CX28 106 aaKnown RBP3.47□□□□□ -1.85
UBX3YDL091C NCP1P16603 691 aaKnown RBP3.47□□□□□ -1.85
UBX3YDL091C PHO81P17442 1178 aa3.47□□□□□ -1.85
UBX3YDL091C SRP54P20424 541 aaKnown RBP3.47□□□□□ -1.85
UBX3YDL091C RGT1P32862 1170 aa3.47□□□□□ -1.85
UBX3YDL091C GCS1P35197 352 aa3.47□□□□□ -1.85
UBX3YDL091C NPR3P38742 1146 aa3.47□□□□□ -1.85
UBX3YDL091C CSL4P53859 292 aaPredicted RBP3.47□□□□□ -1.85
UBX3YDL091C NEW1Q08972 1196 aaKnown RBP3.47□□□□□ -1.85
UBX3YDL091C YER145C-AA0A023PYF4 145 aa3.46□□□□□ -1.86
UBX3YDL091C YEF3P16521 1044 aaKnown RBP3.46□□□□□ -1.86
UBX3YDL091C YCL049CP25577 312 aa3.46□□□□□ -1.86
UBX3YDL091C NUP120P35729 1037 aa3.46□□□□□ -1.86
UBX3YDL091C MNN2P38069 597 aa3.46□□□□□ -1.86
UBX3YDL091C MET30P39014 640 aa3.46□□□□□ -1.86
UBX3YDL091C ACA1P39970 489 aa3.46□□□□□ -1.86
UBX3YDL091C YIL161WP40449 235 aaKnown RBP3.46□□□□□ -1.86
UBX3YDL091C ARP9Q05123 467 aa3.46□□□□□ -1.86
UBX3YDL091C CIA1Q05583 330 aa3.46□□□□□ -1.86
UBX3YDL091C YLR281CQ05863 155 aa3.46□□□□□ -1.86
UBX3YDL091C ECI1Q05871 280 aa3.46□□□□□ -1.86
UBX3YDL091C SWA2Q06677 668 aa3.46□□□□□ -1.86
UBX3YDL091C NDD1Q08887 554 aa3.46□□□□□ -1.86
UBX3YDL091C YLR112WQ12130 139 aa3.46□□□□□ -1.86
UBX3YDL091C ATP2P00830 511 aaKnown RBP3.45□□□□□ -1.86
UBX3YDL091C STE50P25344 346 aa3.45□□□□□ -1.86
UBX3YDL091C ADE17P38009 592 aaKnown RBP3.45□□□□□ -1.86
UBX3YDL091C UBP13P38187 747 aa3.45□□□□□ -1.86
UBX3YDL091C LEU5P38702 357 aa3.45□□□□□ -1.86
UBX3YDL091C YAT2P40017 923 aa3.45□□□□□ -1.86
UBX3YDL091C YIL169CP40442 995 aa3.45□□□□□ -1.86
UBX3YDL091C IZH1Q03419 316 aa3.45□□□□□ -1.86
UBX3YDL091C IOC4Q04213 475 aa3.45□□□□□ -1.86
UBX3YDL091C GRS2Q06817 618 aa3.45□□□□□ -1.86
UBX3YDL091C YLR049CQ12110 428 aa3.45□□□□□ -1.86
UBX3YDL091C MSM1P22438 575 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms