RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C HOF1Q05080 669 aa4.7□□□□□ -1.66
VPS21YOR089C IZH3Q07959 543 aa4.7□□□□□ -1.66
VPS21YOR089C IRC13Q08630 104 aa4.7□□□□□ -1.66
VPS21YOR089C HSP33Q08914 237 aaKnown RBP4.7□□□□□ -1.66
VPS21YOR089C HSP32Q08992 237 aa4.7□□□□□ -1.66
VPS21YOR089C NUS1Q12063 375 aa4.7□□□□□ -1.66
VPS21YOR089C HUA2Q12134 243 aa4.7□□□□□ -1.66
VPS21YOR089C GDB1Q06625 1536 aa4.7□□□□□ -1.66
VPS21YOR089C YRF1-1P0CX20 1796 aa4.7□□□□□ -1.66
VPS21YOR089C YRF1-5P0CX21 1796 aa4.7□□□□□ -1.66
VPS21YOR089C YRF1-8P0CX22 1796 aa4.7□□□□□ -1.66
VPS21YOR089C ATP2P00830 511 aaKnown RBP4.69□□□□□ -1.66
VPS21YOR089C SAC6P32599 642 aaKnown RBP4.69□□□□□ -1.66
VPS21YOR089C PHO11P35842 467 aa4.69□□□□□ -1.66
VPS21YOR089C PHO12P38693 467 aa4.69□□□□□ -1.66
VPS21YOR089C STB5P38699 743 aa4.69□□□□□ -1.66
VPS21YOR089C ARC1P46672 376 aaKnown RBP4.69□□□□□ -1.66
VPS21YOR089C UPF3P48412 387 aaKnown RBP4.69□□□□□ -1.66
VPS21YOR089C COG1P53079 417 aa4.69□□□□□ -1.66
VPS21YOR089C RRT6P53117 311 aaPredicted RBP4.69□□□□□ -1.66
VPS21YOR089C CSL4P53859 292 aaPredicted RBP4.69□□□□□ -1.66
VPS21YOR089C RIA1P53893 1110 aa4.69□□□□□ -1.66
VPS21YOR089C CTF4Q01454 927 aa4.69□□□□□ -1.66
VPS21YOR089C RCO1Q04779 684 aa4.69□□□□□ -1.66
VPS21YOR089C YDL086WQ07505 273 aa4.69□□□□□ -1.66
VPS21YOR089C ICL2Q12031 575 aa4.69□□□□□ -1.66
VPS21YOR089C TAH18Q12181 623 aa4.69□□□□□ -1.66
VPS21YOR089C SUL2Q12325 893 aa4.69□□□□□ -1.66
VPS21YOR089C LAS17Q12446 633 aa4.69□□□□□ -1.66
VPS21YOR089C PDR10P51533 1564 aa4.69□□□□□ -1.66
VPS21YOR089C SPO14P36126 1683 aa4.68□□□□□ -1.66
VPS21YOR089C CDC24P11433 854 aaPredicted RBP4.68□□□□□ -1.66
VPS21YOR089C PGS1P25578 521 aa4.68□□□□□ -1.66
VPS21YOR089C PRE2P30656 287 aaKnown RBP4.68□□□□□ -1.66
VPS21YOR089C LOT5P34234 306 aa4.68□□□□□ -1.66
VPS21YOR089C VTC2P43585 828 aa4.68□□□□□ -1.66
VPS21YOR089C SGM1P47166 707 aa4.68□□□□□ -1.66
VPS21YOR089C FHN1P53279 174 aa4.68□□□□□ -1.66
VPS21YOR089C MTG1Q03151 367 aaPredicted RBP4.68□□□□□ -1.66
VPS21YOR089C EFR3Q03653 782 aaKnown RBP4.68□□□□□ -1.66
VPS21YOR089C ATG23Q06671 453 aa4.68□□□□□ -1.66
VPS21YOR089C VAM6Q07468 1049 aa4.68□□□□□ -1.66
VPS21YOR089C YPL216WQ08964 1102 aa4.68□□□□□ -1.66
VPS21YOR089C TGS1Q12052 315 aa4.68□□□□□ -1.66
VPS21YOR089C YOR111WQ99210 232 aa4.68□□□□□ -1.66
VPS21YOR089C ARO1P08566 1588 aaKnown RBP4.68□□□□□ -1.66
VPS21YOR089C ALG7P07286 448 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-LR1P0C2J4 438 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-FP0CX61 438 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-GR2P0CX62 438 aa4.67□□□□□ -1.66
VPS21YOR089C PDE1P22434 369 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-CP25383 438 aa4.67□□□□□ -1.66
VPS21YOR089C YCR061WP25639 631 aa4.67□□□□□ -1.66
VPS21YOR089C MSS1P32559 526 aaPredicted RBP4.67□□□□□ -1.66
VPS21YOR089C YBL029WP38201 376 aa4.67□□□□□ -1.66
VPS21YOR089C HRB1P38922 454 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
VPS21YOR089C ARF3P40994 183 aaRIP-Chip data4.67□□□□□ -1.66 RIP-Chip
VPS21YOR089C VPS4P52917 437 aa4.67□□□□□ -1.66
VPS21YOR089C MRPL19P53875 158 aa4.67□□□□□ -1.66
VPS21YOR089C SSL2Q00578 843 aa4.67□□□□□ -1.66
VPS21YOR089C MFM1Q02783 413 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-DR2Q03483 438 aa4.67□□□□□ -1.66
VPS21YOR089C UFO1Q04511 668 aa4.67□□□□□ -1.66
VPS21YOR089C CRF1Q04930 467 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-BQ12260 438 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-OR2Q12293 438 aa4.67□□□□□ -1.66
VPS21YOR089C SCM3Q12334 223 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-DR1Q12392 438 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-OR1Q12439 438 aa4.67□□□□□ -1.66
VPS21YOR089C TY2A-DR3Q99303 438 aa4.67□□□□□ -1.66
VPS21YOR089C PPR1P07272 904 aaPredicted RBP4.66□□□□□ -1.66
VPS21YOR089C SEC53P07283 254 aaKnown RBP4.66□□□□□ -1.66
VPS21YOR089C THR1P17423 357 aaKnown RBP4.66□□□□□ -1.66
VPS21YOR089C CDC15P27636 974 aa4.66□□□□□ -1.66
VPS21YOR089C HRR25P29295 494 aaKnown RBP4.66□□□□□ -1.66
VPS21YOR089C ELF1P36053 145 aa4.66□□□□□ -1.66
VPS21YOR089C MRPL7P36519 292 aa4.66□□□□□ -1.66
VPS21YOR089C TDP1P38319 544 aa4.66□□□□□ -1.66
VPS21YOR089C SDH8P38345 138 aa4.66□□□□□ -1.66
VPS21YOR089C UTP9P38882 575 aaKnown RBP4.66□□□□□ -1.66
VPS21YOR089C YJL206CP39529 758 aa4.66□□□□□ -1.66
VPS21YOR089C ARB1P40024 610 aaKnown RBP4.66□□□□□ -1.66
VPS21YOR089C UBP7P40453 1071 aa4.66□□□□□ -1.66
VPS21YOR089C YGR151CP53287 111 aa4.66□□□□□ -1.66
VPS21YOR089C TDA9Q04545 1251 aa4.66□□□□□ -1.66
VPS21YOR089C YLR287CQ05881 355 aa4.66□□□□□ -1.66
VPS21YOR089C RVB2Q12464 471 aaKnown RBP4.66□□□□□ -1.66
VPS21YOR089C YBR255C-AQ3E776 120 aa4.66□□□□□ -1.66
VPS21YOR089C TFC3P34111 1160 aa4.65□□□□□ -1.67
VPS21YOR089C CCL1P37366 393 aa4.65□□□□□ -1.67
VPS21YOR089C UBS1P38290 277 aa4.65□□□□□ -1.67
VPS21YOR089C ARG2P40360 574 aa4.65□□□□□ -1.67
VPS21YOR089C LYS14P40971 790 aa4.65□□□□□ -1.67
VPS21YOR089C SIP4P46954 829 aa4.65□□□□□ -1.67
VPS21YOR089C BUL1P48524 976 aa4.65□□□□□ -1.67
VPS21YOR089C DIP5P53388 608 aa4.65□□□□□ -1.67
VPS21YOR089C ATG4P53867 494 aa4.65□□□□□ -1.67
VPS21YOR089C USA1Q03714 838 aa4.65□□□□□ -1.67
VPS21YOR089C BMS1Q08965 1183 aaKnown RBP4.65□□□□□ -1.67
VPS21YOR089C MLH3Q12083 715 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms