RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	THI80	P35202	319 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	IFA38	P38286	347 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	NPR3	P38742	1146 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	PES4	P39684	611 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	YER010C	P40011	234 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	MEP1	P40260	492 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	DPH1	P40487	425 aa	Known RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	PXA1	P41909	870 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	GPI8	P49018	411 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	AMA1	P50082	593 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	MNT2	P53059	558 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	COX18	P53239	316 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	ERO1	Q03103	563 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	HMO1	Q03973	246 aa	Known RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	SYF1	Q04048	859 aa	Predicted RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	TDA9	Q04545	1251 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	VBA4	Q04602	768 aa	Known RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	TRI1	Q05024	226 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	ASM4	Q05166	528 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	IRC3	Q06683	689 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	DIB1	Q06819	143 aa	Predicted RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	STP4	Q07351	490 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	PGA3	Q12746	312 aa	Known RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	LAM4	P38800	1345 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	FIG2	P25653	1609 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	FUM1	P08417	488 aa	Known RBP	4.7	□□□□□ -1.66
RCM1	YNL022C	FRS1	P15624	595 aa	Known RBP	4.7	□□□□□ -1.66
RCM1	YNL022C	SIR1	P21691	654 aa		4.7	□□□□□ -1.66
RCM1	YNL022C	SPL2	P38839	148 aa		4.7	□□□□□ -1.66
RCM1	YNL022C	UPF3	P48412	387 aa	Known RBP	4.7	□□□□□ -1.66
RCM1	YNL022C	CTF18	P49956	741 aa		4.7	□□□□□ -1.66
RCM1	YNL022C	TAF4	P50105	388 aa		4.7	□□□□□ -1.66
RCM1	YNL022C	RPT4	P53549	437 aa	Known RBP	4.7	□□□□□ -1.66
RCM1	YNL022C	NSE5	Q03718	556 aa		4.7	□□□□□ -1.66
RCM1	YNL022C	TRM8	Q12009	286 aa		4.7	□□□□□ -1.66
RCM1	YNL022C	RRG1	Q12167	365 aa	Predicted RBP	4.7	□□□□□ -1.66
RCM1	YNL022C	SEM1	O94742	89 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	ERG20	P08524	352 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	BET2	P20133	325 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	OSH3	P38713	996 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
RCM1	YNL022C	PRM2	P40534	656 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	YIR042C	P40586	236 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	MAD2	P40958	196 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	YNR071C	P53757	342 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	CTK1	Q03957	528 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	DLT1	Q04216	342 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	INM2	Q05533	292 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	SPN1	Q06505	410 aa	Predicted RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	HSP42	Q12329	375 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	SCM3	Q12334	223 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	LAT1	P12695	482 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	SEC15	P22224	910 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	RIT1	P23796	513 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	PRP22	P24384	1145 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	SWI4	P25302	1093 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	CWH43	P25618	953 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	SMY1	P32364	656 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	VPH1	P32563	840 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	VMA8	P32610	256 aa	Known RBP	4.69	□□□□□ -1.66
RCM1	YNL022C	RIC1	P40395	1056 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	LYS14	P40971	790 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
RCM1	YNL022C	IRC4	Q03036	179 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	YKU80	Q04437	629 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	CRD1	Q07560	283 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	AAD4	Q07747	329 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	TGL5	Q12043	749 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	ZRT2	Q12436	422 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	SKM1	Q12469	655 aa		4.69	□□□□□ -1.66
RCM1	YNL022C	PMA1	P05030	918 aa	Known RBP	4.68	□□□□□ -1.66
RCM1	YNL022C	TPK1	P06244	397 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	ADE3	P07245	946 aa	Known RBP	4.68	□□□□□ -1.66
RCM1	YNL022C	LCB1	P25045	558 aa	Known RBP	4.68	□□□□□ -1.66
RCM1	YNL022C	KRE2	P27809	442 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	ANP1	P32629	500 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	DEF1	P35732	738 aa	Known RBP	4.68	□□□□□ -1.66
RCM1	YNL022C	PFF1	P38244	976 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	YBR138C	P38277	524 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	YHR112C	P38716	378 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	APE4	P38821	490 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	BDH2	P39713	417 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	CAB2	P40506	365 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	SPO22	P40511	975 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	FKH2	P41813	862 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	PEF1	P53238	335 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	ERG5	P54781	538 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	RCF1	Q03713	159 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	SNO4	Q04902	237 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	YDR341C	Q05506	607 aa	Known RBP	4.68	□□□□□ -1.66
RCM1	YNL022C	HSP33	Q08914	237 aa	Known RBP	4.68	□□□□□ -1.66
RCM1	YNL022C	HSP32	Q08992	237 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	DIN7	Q12086	430 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	LAS17	Q12446	633 aa		4.68	□□□□□ -1.66
RCM1	YNL022C	URA3	P03962	267 aa		4.67	□□□□□ -1.66
RCM1	YNL022C	RPS9B	P05755	195 aa	Known RBP	4.67	□□□□□ -1.66
RCM1	YNL022C	RPL19A	P0CX82	189 aa	Known RBP	4.67	□□□□□ -1.66
RCM1	YNL022C	RPL19B	P0CX83	189 aa	Predicted RBP	4.67	□□□□□ -1.66
RCM1	YNL022C	BIK1	P11709	440 aa		4.67	□□□□□ -1.66
RCM1	YNL022C	TPM1	P17536	199 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms