RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeastyeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCM1YNL022C DRS1P32892 752 aaKnown RBP11.82□□□□□ -0.52
RCM1YNL022C MTC1P47018 478 aaKnown RBP11.59□□□□□ -0.55
RCM1YNL022C BFR2Q06631 534 aaKnown RBP10.32□□□□□ -0.76
RCM1YNL022C DIP2Q12220 943 aaPredicted RBP9.99□□□□□ -0.81
RCM1YNL022C AVT3P36062 692 aa9.91□□□□□ -0.82
RCM1YNL022C TFA1P36100 482 aa9.85□□□□□ -0.83
RCM1YNL022C ISW2Q08773 1120 aa9.43□□□□□ -0.9
RCM1YNL022C RSE1Q04693 1361 aaKnown RBP9.4□□□□□ -0.9
RCM1YNL022C FAP1P53971 965 aa9.28□□□□□ -0.92
RCM1YNL022C RPG1P38249 964 aaKnown RBP9.21□□□□□ -0.93
RCM1YNL022C PRI1P10363 409 aa9.19□□□□□ -0.94
RCM1YNL022C AAD16Q02895 342 aa9.01□□□□□ -0.97
RCM1YNL022C RPL17AP05740 184 aaKnown RBP9□□□□□ -0.97
RCM1YNL022C RPL17BP46990 184 aaKnown RBP9□□□□□ -0.97
RCM1YNL022C REB1P21538 810 aa8.92□□□□□ -0.98
RCM1YNL022C RQC2Q12532 1038 aaKnown RBP8.91□□□□□ -0.98
RCM1YNL022C SPT21P35209 758 aa8.7□□□□□ -1.02
RCM1YNL022C TSR3Q12094 313 aaKnown RBP8.69□□□□□ -1.02
RCM1YNL022C PRY3P47033 881 aa8.65□□□□□ -1.02
RCM1YNL022C RIM101P33400 625 aa8.61□□□□□ -1.03
RCM1YNL022C MRPL32P25348 183 aa8.42□□□□□ -1.06
RCM1YNL022C PTP3P40048 928 aa8.42□□□□□ -1.06
RCM1YNL022C YKR023WP36119 530 aaKnown RBP8.33□□□□□ -1.08
RCM1YNL022C SSP1P38871 571 aa8.33□□□□□ -1.08
RCM1YNL022C OXP1P28273 1286 aa8.31□□□□□ -1.08
RCM1YNL022C YIL055CP40523 627 aaKnown RBP8.27□□□□□ -1.09
RCM1YNL022C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
RCM1YNL022C HAA1Q12753 694 aaKnown RBP8.24□□□□□ -1.09
RCM1YNL022C YAH1Q12184 172 aaKnown RBP8.22□□□□□ -1.09
RCM1YNL022C TFC8Q12308 588 aa8.2□□□□□ -1.1
RCM1YNL022C HOP09932 586 aa8.15□□□□□ -1.1
RCM1YNL022C YLR271WQ06152 274 aa8.13□□□□□ -1.11
RCM1YNL022C DMA1P38823 416 aa8.13□□□□□ -1.11
RCM1YNL022C RSM7P47150 247 aa8.12□□□□□ -1.11
RCM1YNL022C TAF7Q05021 590 aa8.11□□□□□ -1.11
RCM1YNL022C CDC27P38042 758 aa8.1□□□□□ -1.11
RCM1YNL022C YCK3P39962 524 aa8.1□□□□□ -1.11
RCM1YNL022C DCD1P06773 312 aa8.06□□□□□ -1.12
RCM1YNL022C MGA2P40578 1113 aa8.06□□□□□ -1.12
RCM1YNL022C BBC1P47068 1157 aa7.97□□□□□ -1.13
RCM1YNL022C AI2P03876 854 aa7.95□□□□□ -1.14
RCM1YNL022C BCH2P36122 765 aa7.95□□□□□ -1.14
RCM1YNL022C PSD2P53037 1138 aaKnown RBP7.94□□□□□ -1.14
RCM1YNL022C CST9Q06032 482 aa7.88□□□□□ -1.15
RCM1YNL022C UBP10P53874 792 aaPredicted RBP7.87□□□□□ -1.15
RCM1YNL022C EPS1P40557 701 aa7.85□□□□□ -1.15
RCM1YNL022C YGL015CP33199 130 aa7.81□□□□□ -1.16
RCM1YNL022C SCY1P53009 804 aa7.8□□□□□ -1.16
RCM1YNL022C BDF1P35817 686 aa7.78□□□□□ -1.16
RCM1YNL022C MAP2P38174 421 aaKnown RBP7.75□□□□□ -1.17
RCM1YNL022C LEO1P38439 464 aa7.73□□□□□ -1.17
RCM1YNL022C MRM1P25270 412 aa7.71□□□□□ -1.18
RCM1YNL022C SAS10Q12136 610 aaPredicted RBP7.7□□□□□ -1.18
RCM1YNL022C SLX5P32828 619 aaKnown RBP7.68□□□□□ -1.18
RCM1YNL022C RTG3P38165 486 aa7.67□□□□□ -1.18
RCM1YNL022C RAM2P29703 316 aa7.64□□□□□ -1.19
RCM1YNL022C RCR1P38212 213 aa7.59□□□□□ -1.19
RCM1YNL022C MAK11P20484 414 aaKnown RBP7.58□□□□□ -1.2
RCM1YNL022C IFH1P39520 1085 aa7.57□□□□□ -1.2
RCM1YNL022C LEU3P08638 886 aa7.56□□□□□ -1.2
RCM1YNL022C TIF4632P39936 914 aaKnown RBP7.56□□□□□ -1.2
RCM1YNL022C SET1P38827 1080 aaKnown RBP7.55□□□□□ -1.2
RCM1YNL022C YMR1P47147 688 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
RCM1YNL022C VPS29P38759 282 aa7.5□□□□□ -1.21
RCM1YNL022C YPR148CQ06523 435 aa7.5□□□□□ -1.21
RCM1YNL022C NSR1P27476 414 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21 RIP-Chip
RCM1YNL022C CKB1P43639 278 aa7.49□□□□□ -1.21
RCM1YNL022C NOP53Q12080 455 aaKnown RBP7.46□□□□□ -1.22
RCM1YNL022C TGL3P40308 642 aa7.45□□□□□ -1.22
RCM1YNL022C COQ8P27697 501 aa7.43□□□□□ -1.22
RCM1YNL022C YOR238WQ08634 303 aa7.43□□□□□ -1.22
RCM1YNL022C YAP5P40574 245 aa7.43□□□□□ -1.22
RCM1YNL022C VPS70P47161 811 aa7.42□□□□□ -1.22
RCM1YNL022C DBP1P24784 617 aaKnown RBP7.41□□□□□ -1.22
RCM1YNL022C STS1P38637 319 aa7.41□□□□□ -1.22
RCM1YNL022C MIF2P35201 549 aa7.37□□□□□ -1.23
RCM1YNL022C SPB4P25808 606 aaPredicted RBP7.36□□□□□ -1.23
RCM1YNL022C YFR006WP43590 535 aa7.35□□□□□ -1.23
RCM1YNL022C EDS1P38073 919 aa7.31□□□□□ -1.24
RCM1YNL022C RPN1P38764 993 aaKnown RBP7.31□□□□□ -1.24
RCM1YNL022C DSF2P38213 736 aa7.3□□□□□ -1.24
RCM1YNL022C PTC3P34221 468 aaKnown RBP7.29□□□□□ -1.24
RCM1YNL022C SGS1P35187 1447 aa7.29□□□□□ -1.24
RCM1YNL022C VMA1P17255 1071 aaKnown RBP7.28□□□□□ -1.24
RCM1YNL022C PBS2P08018 668 aa7.27□□□□□ -1.25
RCM1YNL022C PIB1Q06651 286 aa7.26□□□□□ -1.25
RCM1YNL022C MST1P07236 462 aa7.25□□□□□ -1.25
RCM1YNL022C REF2P42073 533 aaPredicted RBP7.25□□□□□ -1.25
RCM1YNL022C MAK21Q12176 1025 aaKnown RBP7.24□□□□□ -1.25
RCM1YNL022C GTT3P39996 337 aa7.23□□□□□ -1.25
RCM1YNL022C ATH1P48016 1211 aa7.22□□□□□ -1.25
RCM1YNL022C SAM3Q08986 587 aa7.22□□□□□ -1.25
RCM1YNL022C GRE2Q12068 342 aaKnown RBP7.22□□□□□ -1.25
RCM1YNL022C MAM3Q12296 706 aa7.22□□□□□ -1.25
RCM1YNL022C ABP1P15891 592 aaKnown RBP7.2□□□□□ -1.26
RCM1YNL022C GUT1P32190 709 aa7.2□□□□□ -1.26
RCM1YNL022C YNR021WP53723 404 aaKnown RBP7.17□□□□□ -1.26
RCM1YNL022C DMA2P53924 522 aa7.17□□□□□ -1.26
RCM1YNL022C COX6P00427 148 aa7.15□□□□□ -1.27
RCM1YNL022C GYP5Q12344 894 aa7.15□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms