RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YML053CQ04978 212 aa2.85□□□□□ -1.95
SEC22YLR268W UBP12P39538 1254 aa2.84□□□□□ -1.95
SEC22YLR268W UBP7P40453 1071 aa2.84□□□□□ -1.95
SEC22YLR268W DUG1P43616 481 aaKnown RBP2.84□□□□□ -1.95
SEC22YLR268W YOR378WQ08902 515 aa2.84□□□□□ -1.95
SEC22YLR268W ATP12P22135 325 aa2.83□□□□□ -1.96
SEC22YLR268W ARG1P22768 420 aa2.83□□□□□ -1.96
SEC22YLR268W PET309P32522 965 aaPredicted RBP2.83□□□□□ -1.96
SEC22YLR268W GRX4P32642 244 aa2.83□□□□□ -1.96
SEC22YLR268W SLX1P38324 304 aa2.83□□□□□ -1.96
SEC22YLR268W VBA2P38358 474 aaKnown RBP2.83□□□□□ -1.96
SEC22YLR268W YEN1P40028 759 aa2.83□□□□□ -1.96
SEC22YLR268W ROK1P45818 564 aaPredicted RBP2.83□□□□□ -1.96
SEC22YLR268W MNT2P53059 558 aa2.83□□□□□ -1.96
SEC22YLR268W GPG1P53130 126 aa2.83□□□□□ -1.96
SEC22YLR268W SLD3P53135 668 aa2.83□□□□□ -1.96
SEC22YLR268W EAF7P53911 425 aaKnown RBP2.83□□□□□ -1.96
SEC22YLR268W CRZ1P53968 678 aa2.83□□□□□ -1.96
SEC22YLR268W RSA1Q08932 381 aa2.83□□□□□ -1.96
SEC22YLR268W CWC2Q12046 339 aaPredicted RBP2.83□□□□□ -1.96
SEC22YLR268W TAH18Q12181 623 aa2.83□□□□□ -1.96
SEC22YLR268W CTT1P06115 562 aa2.82□□□□□ -1.96
SEC22YLR268W ILV2P07342 687 aaKnown RBP2.82□□□□□ -1.96
SEC22YLR268W MSS51P32335 436 aa2.82□□□□□ -1.96
SEC22YLR268W ARO9P38840 513 aaPredicted RBP2.82□□□□□ -1.96
SEC22YLR268W VPS41P38959 992 aa2.82□□□□□ -1.96
SEC22YLR268W SSP120P39931 234 aaKnown RBP2.82□□□□□ -1.96
SEC22YLR268W EMP65P40085 556 aa2.82□□□□□ -1.96
SEC22YLR268W VPS25P47142 202 aa2.82□□□□□ -1.96
SEC22YLR268W CUL3P53202 744 aa2.82□□□□□ -1.96
SEC22YLR268W CAC2Q04199 468 aa2.82□□□□□ -1.96
SEC22YLR268W ECI1Q05871 280 aa2.82□□□□□ -1.96
SEC22YLR268W URA3P03962 267 aa2.81□□□□□ -1.96
SEC22YLR268W YCR061WP25639 631 aa2.81□□□□□ -1.96
SEC22YLR268W DAL3P32459 195 aa2.81□□□□□ -1.96
SEC22YLR268W SIP1P32578 815 aa2.81□□□□□ -1.96
SEC22YLR268W SER1P33330 395 aaKnown RBP2.81□□□□□ -1.96
SEC22YLR268W EFM2P38347 419 aa2.81□□□□□ -1.96
SEC22YLR268W STB5P38699 743 aa2.81□□□□□ -1.96
SEC22YLR268W STL1P39932 569 aa2.81□□□□□ -1.96
SEC22YLR268W GPP2P40106 250 aaKnown RBP2.81□□□□□ -1.96
SEC22YLR268W ARP9Q05123 467 aa2.81□□□□□ -1.96
SEC22YLR268W YLR352WQ06479 807 aa2.81□□□□□ -1.96
SEC22YLR268W THI3Q07471 609 aa2.81□□□□□ -1.96
SEC22YLR268W APL5Q08951 932 aaKnown RBP2.81□□□□□ -1.96
SEC22YLR268W TIP41Q12199 356 aa2.81□□□□□ -1.96
SEC22YLR268W SSB1P11484 613 aaKnown RBP2.8□□□□□ -1.96
SEC22YLR268W PTC6P25646 442 aa2.8□□□□□ -1.96
SEC22YLR268W SEC1P30619 724 aaKnown RBP2.8□□□□□ -1.96
SEC22YLR268W OCT1P35999 772 aa2.8□□□□□ -1.96
SEC22YLR268W RPF2P36160 344 aaKnown RBP2.8□□□□□ -1.96
SEC22YLR268W VFA1P40080 203 aa2.8□□□□□ -1.96
SEC22YLR268W SSB2P40150 613 aaKnown RBP2.8□□□□□ -1.96
SEC22YLR268W YJL070CP40361 888 aa2.8□□□□□ -1.96
SEC22YLR268W IZH1Q03419 316 aa2.8□□□□□ -1.96
SEC22YLR268W YMR254CQ04838 102 aa2.8□□□□□ -1.96
SEC22YLR268W PDR8Q06149 701 aa2.8□□□□□ -1.96
SEC22YLR268W TRE2Q08693 809 aa2.8□□□□□ -1.96
SEC22YLR268W LEA1Q08963 238 aaPredicted RBP2.8□□□□□ -1.96
SEC22YLR268W COX11P19516 300 aaKnown RBP2.79□□□□□ -1.96
SEC22YLR268W TAF5P38129 798 aa2.79□□□□□ -1.96
SEC22YLR268W EXO84P38261 753 aa2.79□□□□□ -1.96
SEC22YLR268W ASG1P40467 964 aa2.79□□□□□ -1.96
SEC22YLR268W CDC1P40986 491 aa2.79□□□□□ -1.96
SEC22YLR268W GSM1P42950 618 aa2.79□□□□□ -1.96
SEC22YLR268W PIG1Q06216 648 aa2.79□□□□□ -1.96
SEC22YLR268W ERC1P38767 581 aa2.78□□□□□ -1.96
SEC22YLR268W FAA2P39518 744 aa2.78□□□□□ -1.96
SEC22YLR268W EAF5P39995 279 aa2.78□□□□□ -1.96
SEC22YLR268W UBP8P50102 471 aa2.78□□□□□ -1.96
SEC22YLR268W PSP1P50896 841 aaKnown RBP2.78□□□□□ -1.96
SEC22YLR268W YNR071CP53757 342 aa2.78□□□□□ -1.96
SEC22YLR268W CRF1Q04930 467 aa2.78□□□□□ -1.96
SEC22YLR268W PSF3Q12146 194 aa2.78□□□□□ -1.96
SEC22YLR268W YML002WP0CF17 737 aa2.77□□□□□ -1.97
SEC22YLR268W KAR1P11927 433 aa2.77□□□□□ -1.97
SEC22YLR268W PAF1P38351 445 aa2.77□□□□□ -1.97
SEC22YLR268W AZF1P41696 914 aa2.77□□□□□ -1.97
SEC22YLR268W TRI1Q05024 226 aa2.77□□□□□ -1.97
SEC22YLR268W POS5Q06892 414 aa2.77□□□□□ -1.97
SEC22YLR268W PEX15Q08215 383 aa2.77□□□□□ -1.97
SEC22YLR268W MCH4Q08268 501 aa2.77□□□□□ -1.97
SEC22YLR268W YLR112WQ12130 139 aa2.77□□□□□ -1.97
SEC22YLR268W TMA17Q12513 150 aa2.77□□□□□ -1.97
SEC22YLR268W PMS1P14242 873 aa2.76□□□□□ -1.97
SEC22YLR268W MRC1P25588 1096 aa2.76□□□□□ -1.97
SEC22YLR268W CPR3P25719 182 aa2.76□□□□□ -1.97
SEC22YLR268W MAD2P40958 196 aa2.76□□□□□ -1.97
SEC22YLR268W NIT2P47016 307 aa2.76□□□□□ -1.97
SEC22YLR268W ESBP6P53918 673 aa2.76□□□□□ -1.97
SEC22YLR268W SWF1Q04629 336 aa2.76□□□□□ -1.97
SEC22YLR268W TLG2Q08144 397 aa2.76□□□□□ -1.97
SEC22YLR268W YBR298C-AQ8TGK4 73 aa2.76□□□□□ -1.97
SEC22YLR268W REV1P12689 985 aa2.75□□□□□ -1.97
SEC22YLR268W HNM1P19807 563 aa2.75□□□□□ -1.97
SEC22YLR268W PDE1P22434 369 aa2.75□□□□□ -1.97
SEC22YLR268W PRE2P30656 287 aaKnown RBP2.75□□□□□ -1.97
SEC22YLR268W YBR071WP38243 211 aa2.75□□□□□ -1.97
SEC22YLR268W YJR120WP47157 116 aa2.75□□□□□ -1.97
SEC22YLR268W YRB30P53107 440 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms