RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	ADY4	Q05955	493 aa		4.62	□□□□□ -1.67
TFA1	YKL028W	SKG3	Q06315	1026 aa		4.62	□□□□□ -1.67
TFA1	YKL028W	ICL2	Q12031	575 aa		4.62	□□□□□ -1.67
TFA1	YKL028W	SGT2	Q12118	346 aa	Known RBP	4.62	□□□□□ -1.67
TFA1	YKL028W	UPC2	Q12151	913 aa		4.62	□□□□□ -1.67
TFA1	YKL028W	YRF1-4	O13559	1382 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	YPT7	P32939	208 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	UBP13	P38187	747 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	CDS1	P38221	457 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	RGI2	P40188	164 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	CCT7	P42943	550 aa	Known RBP	4.61	□□□□□ -1.67
TFA1	YKL028W	AAD10	P47182	288 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	GCV2	P49095	1034 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
TFA1	YKL028W	VPS64	Q03944	604 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	YMR111C	Q04461	462 aa	Predicted RBP	4.61	□□□□□ -1.67
TFA1	YKL028W	YOR352W	Q08816	343 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	GPB1	Q08886	897 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	SUL2	Q12325	893 aa		4.61	□□□□□ -1.67
TFA1	YKL028W	TUF1	P02992	437 aa	Known RBP	4.6	□□□□□ -1.67
TFA1	YKL028W	KAR3	P17119	729 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	YCR051W	P25631	222 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	PRP45	P28004	379 aa	Predicted RBP	4.6	□□□□□ -1.67
TFA1	YKL028W	URA7	P28274	579 aa	Known RBP	4.6	□□□□□ -1.67
TFA1	YKL028W	PRE4	P30657	266 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	IME2	P32581	645 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	GYP6	P32806	458 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	UBP11	P36026	717 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	GND1	P38720	489 aa	Known RBP	4.6	□□□□□ -1.67
TFA1	YKL028W	CTF8	P38877	133 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	VPS41	P38959	992 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	VFA1	P40080	203 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	NAS2	P40555	220 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	MET28	P40573	187 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	NOP9	P47077	666 aa	Known RBP	4.6	□□□□□ -1.67
TFA1	YKL028W	GLO1	P50107	326 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	TOF1	P53840	1238 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	ERV25	P54837	211 aa	Known RBP	4.6	□□□□□ -1.67
TFA1	YKL028W	TRS31	Q03337	283 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	CDA1	Q06702	301 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	SGO1	Q08490	590 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
TFA1	YKL028W	RIM20	Q12033	661 aa		4.6	□□□□□ -1.67
TFA1	YKL028W	PET122	P10355	254 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	ERG8	P24521	451 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	EBP2	P36049	427 aa	Known RBP	4.59	□□□□□ -1.67
TFA1	YKL028W	REG2	P38232	338 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	SIF2	P38262	535 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	TDP1	P38319	544 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	YHR078W	P38799	552 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	MEF2	P39677	819 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	ATF1	P40353	525 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	PFK26	P40433	827 aa	Known RBP	4.59	□□□□□ -1.67
TFA1	YKL028W	EFM4	P40516	257 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	TCB2	P48231	1178 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	SNF12	P53628	566 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	YAP6	Q03935	383 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	RAD33	Q04231	177 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	VBA4	Q04602	768 aa	Known RBP	4.59	□□□□□ -1.67
TFA1	YKL028W	GTB1	Q04924	702 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	SWA2	Q06677	668 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	VPS36	Q06696	566 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	FMP45	Q07651	309 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	RIX7	Q07844	837 aa	Known RBP	4.59	□□□□□ -1.67
TFA1	YKL028W	NUS1	Q12063	375 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	SPE3	Q12074	293 aa	Known RBP	4.59	□□□□□ -1.67
TFA1	YKL028W	YJR112W-A	Q3E743	109 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	VCX1	Q99385	411 aa		4.59	□□□□□ -1.67
TFA1	YKL028W	CET1	O13297	549 aa	Predicted RBP	4.58	□□□□□ -1.68
TFA1	YKL028W	QCR6	P00127	147 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	ATP2	P00830	511 aa	Known RBP	4.58	□□□□□ -1.68
TFA1	YKL028W	STE12	P13574	688 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	CPR2	P23285	205 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	DAL80	P26343	269 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	RPS7A	P26786	190 aa	Known RBP	4.58	□□□□□ -1.68
TFA1	YKL028W	MSP1	P28737	362 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	ALY1	P36117	915 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	SAK1	P38990	1142 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	ARB1	P40024	610 aa	Known RBP	4.58	□□□□□ -1.68
TFA1	YKL028W	YIL161W	P40449	235 aa	Known RBP	4.58	□□□□□ -1.68
TFA1	YKL028W	SDP1	P40479	209 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	BIT61	P47041	543 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	ZAP1	P47043	880 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	YBP2	P53169	641 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	CUL3	P53202	744 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	YGR012W	P53206	393 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	FDC1	Q03034	503 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	MGR3	Q04472	501 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	RNH1	Q04740	348 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	AIM6	Q07716	390 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	GPM3	Q12326	303 aa		4.58	□□□□□ -1.68
TFA1	YKL028W	CYC1	P00044	109 aa	Predicted RBP	4.57	□□□□□ -1.68
TFA1	YKL028W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
TFA1	YKL028W	PRP28	P23394	588 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	YEL043W	P32618	956 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	PPQ1	P32945	549 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	HEL1	P36113	551 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	DAD2	P36162	133 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	CST26	P38226	397 aa		4.57	□□□□□ -1.68
TFA1	YKL028W	VID24	P38263	362 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms