RNA–Protein interactions for RNA: YJR024C

MDE1, Transcript of 5'-methylthioribulose-1-phosphate dehydratase, yeastyeast

Gene MDE1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDE1YJR024C MNL2Q12205 849 aa6.54□□□□□ -1.36
MDE1YJR024C HOS1Q12214 470 aa6.54□□□□□ -1.36
MDE1YJR024C PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36 RIP-Chip
MDE1YJR024C SVS1Q12254 260 aa6.54□□□□□ -1.36
MDE1YJR024C SSC1P0CS90 654 aaKnown RBP6.53□□□□□ -1.36
MDE1YJR024C STE6P12866 1290 aa6.53□□□□□ -1.36
MDE1YJR024C HAP4P14064 554 aa6.53□□□□□ -1.36
MDE1YJR024C TSR4P25040 408 aa6.53□□□□□ -1.36
MDE1YJR024C GID7P25569 745 aa6.53□□□□□ -1.36
MDE1YJR024C NDI1P32340 513 aa6.53□□□□□ -1.36
MDE1YJR024C YKR051WP36142 418 aa6.53□□□□□ -1.36
MDE1YJR024C ETR1P38071 380 aa6.53□□□□□ -1.36
MDE1YJR024C URA8P38627 578 aaPredicted RBP6.53□□□□□ -1.36
MDE1YJR024C EDC3P39998 551 aaKnown RBP6.53□□□□□ -1.36
MDE1YJR024C YAT2P40017 923 aa6.53□□□□□ -1.36
MDE1YJR024C RTT101P47050 842 aa6.53□□□□□ -1.36
MDE1YJR024C ROM1P53046 1155 aa6.53□□□□□ -1.36
MDE1YJR024C MCM6P53091 1017 aaKnown RBP6.53□□□□□ -1.36
MDE1YJR024C MET13P53128 600 aa6.53□□□□□ -1.36
MDE1YJR024C YET3Q07451 203 aa6.53□□□□□ -1.36
MDE1YJR024C CUE5Q08412 411 aaKnown RBP6.53□□□□□ -1.36
MDE1YJR024C YLR053CQ12026 108 aa6.53□□□□□ -1.36
MDE1YJR024C HIP1P06775 603 aa6.52□□□□□ -1.37
MDE1YJR024C GPA2P10823 449 aa6.52□□□□□ -1.37
MDE1YJR024C APE1P14904 514 aa6.52□□□□□ -1.37
MDE1YJR024C PDE1P22434 369 aa6.52□□□□□ -1.37
MDE1YJR024C PMI40P29952 429 aaKnown RBP6.52□□□□□ -1.37
MDE1YJR024C MRS6P32864 603 aaKnown RBP6.52□□□□□ -1.37
MDE1YJR024C SET3P36124 751 aa6.52□□□□□ -1.37
MDE1YJR024C LIN1P38852 340 aaPredicted RBP6.52□□□□□ -1.37
MDE1YJR024C FAF1P40546 346 aaPredicted RBP6.52□□□□□ -1.37
MDE1YJR024C ROK1P45818 564 aaPredicted RBP6.52□□□□□ -1.37
MDE1YJR024C BFA1P47113 574 aa6.52□□□□□ -1.37
MDE1YJR024C NRD1P53617 575 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
MDE1YJR024C DOS2P54858 310 aa6.52□□□□□ -1.37
MDE1YJR024C RPL34AP87262 121 aaPredicted RBP6.52□□□□□ -1.37
MDE1YJR024C HEH2Q03281 663 aa6.52□□□□□ -1.37
MDE1YJR024C ENT5Q03769 411 aaKnown RBP6.52□□□□□ -1.37
MDE1YJR024C ARP9Q05123 467 aa6.52□□□□□ -1.37
MDE1YJR024C TDA5Q06417 326 aaKnown RBP6.52□□□□□ -1.37
MDE1YJR024C LCB4Q12246 624 aa6.52□□□□□ -1.37
MDE1YJR024C LDB17Q12342 491 aa6.52□□□□□ -1.37
MDE1YJR024C VPS13Q07878 3144 aa6.51□□□□□ -1.37
MDE1YJR024C HSP60P19882 572 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C YCL068CP25593 260 aa6.51□□□□□ -1.37
MDE1YJR024C HEM12P32347 362 aaPredicted RBP6.51□□□□□ -1.37
MDE1YJR024C SEC6P32844 805 aa6.51□□□□□ -1.37
MDE1YJR024C ECM13P38195 257 aa6.51□□□□□ -1.37
MDE1YJR024C FUI1P38196 639 aa6.51□□□□□ -1.37
MDE1YJR024C KAP104P38217 918 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C YBR062CP38239 180 aa6.51□□□□□ -1.37
MDE1YJR024C MSC7P38694 644 aa6.51□□□□□ -1.37
MDE1YJR024C FMP10P40098 244 aa6.51□□□□□ -1.37
MDE1YJR024C BTT1P40314 149 aaPredicted RBP6.51□□□□□ -1.37
MDE1YJR024C DPH1P40487 425 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C TDA10P42938 290 aa6.51□□□□□ -1.37
MDE1YJR024C YFL012WP43580 148 aa6.51□□□□□ -1.37
MDE1YJR024C SNG1P46950 547 aa6.51□□□□□ -1.37
MDE1YJR024C LIA1P47120 325 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C TAN1P53072 289 aaPredicted RBP6.51□□□□□ -1.37
MDE1YJR024C UTP8P53276 713 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C LSC1P53598 329 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C BIO4P53630 237 aa6.51□□□□□ -1.37
MDE1YJR024C TEP1P53916 434 aa6.51□□□□□ -1.37
MDE1YJR024C UBX4P54730 416 aa6.51□□□□□ -1.37
MDE1YJR024C SLT2Q00772 484 aa6.51□□□□□ -1.37
MDE1YJR024C YMR102CQ03177 834 aa6.51□□□□□ -1.37
MDE1YJR024C PIR3Q03180 325 aa6.51□□□□□ -1.37
MDE1YJR024C RLI1Q03195 608 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C INP2Q03824 705 aa6.51□□□□□ -1.37
MDE1YJR024C SPO71Q03868 1245 aa6.51□□□□□ -1.37
MDE1YJR024C BUD22Q04347 519 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C YLR257WQ06146 321 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C SWC7Q06707 132 aa6.51□□□□□ -1.37
MDE1YJR024C BDS1Q08347 646 aa6.51□□□□□ -1.37
MDE1YJR024C NDJ1Q12366 352 aa6.51□□□□□ -1.37
MDE1YJR024C LPX1Q12405 387 aaKnown RBP6.51□□□□□ -1.37
MDE1YJR024C AFI1Q99222 893 aa6.51□□□□□ -1.37
MDE1YJR024C DAT1P13483 248 aaKnown RBP6.5□□□□□ -1.37
MDE1YJR024C AAD3P25612 363 aa6.5□□□□□ -1.37
MDE1YJR024C RAD16P31244 790 aa6.5□□□□□ -1.37
MDE1YJR024C YSW1P38280 609 aa6.5□□□□□ -1.37
MDE1YJR024C SRP68P38687 599 aaKnown RBP6.5□□□□□ -1.37
MDE1YJR024C YJL206CP39529 758 aa6.5□□□□□ -1.37
MDE1YJR024C NUP60P39705 539 aa6.5□□□□□ -1.37
MDE1YJR024C VAC8P39968 578 aa6.5□□□□□ -1.37
MDE1YJR024C MRX1P40050 688 aa6.5□□□□□ -1.37
MDE1YJR024C SLX8P40072 274 aa6.5□□□□□ -1.37
MDE1YJR024C UFE1P41834 346 aa6.5□□□□□ -1.37
MDE1YJR024C BST1P43571 1029 aa6.5□□□□□ -1.37
MDE1YJR024C TRF5P48561 642 aaKnown RBP6.5□□□□□ -1.37
MDE1YJR024C MRX6P48564 524 aa6.5□□□□□ -1.37
MDE1YJR024C HST3P53687 447 aa6.5□□□□□ -1.37
MDE1YJR024C YML119WQ03208 357 aa6.5□□□□□ -1.37
MDE1YJR024C ADI1Q03677 179 aa6.5□□□□□ -1.37
MDE1YJR024C YSH1Q06224 779 aaPredicted RBP6.5□□□□□ -1.37
MDE1YJR024C SWI5P08153 709 aa6.49□□□□□ -1.37
MDE1YJR024C SPE1P08432 466 aa6.49□□□□□ -1.37
MDE1YJR024C IDI1P15496 288 aa6.49□□□□□ -1.37
MDE1YJR024C SMI1P32566 505 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms