RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C RSM24Q03976 319 aa2.15□□□□□ -2.06
TRL1YJL087C MMR1Q06324 491 aa2.15□□□□□ -2.06
TRL1YJL087C SGO1Q08490 590 aa2.15□□□□□ -2.06
TRL1YJL087C TRE1Q08919 783 aa2.15□□□□□ -2.06
TRL1YJL087C SPE3Q12074 293 aaKnown RBP2.15□□□□□ -2.06
TRL1YJL087C HRP1Q99383 534 aaKnown RBP2.15□□□□□ -2.06
TRL1YJL087C PRE10P21242 288 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
TRL1YJL087C CPR2P23285 205 aa2.15□□□□□ -2.07
TRL1YJL087C KIN82P25341 720 aa2.15□□□□□ -2.07
TRL1YJL087C RPS7AP26786 190 aaKnown RBP2.15□□□□□ -2.07
TRL1YJL087C ERV1P27882 189 aa2.15□□□□□ -2.07
TRL1YJL087C TFB1P32776 642 aa2.15□□□□□ -2.07
TRL1YJL087C WHI3P34761 661 aaKnown RBP2.15□□□□□ -2.07
TRL1YJL087C HEL1P36113 551 aa2.15□□□□□ -2.07
TRL1YJL087C SIC1P38634 284 aa2.15□□□□□ -2.07
TRL1YJL087C CCT6P39079 546 aa2.15□□□□□ -2.07
TRL1YJL087C JHD1P40034 492 aa2.15□□□□□ -2.07
TRL1YJL087C PCL7P40186 285 aa2.15□□□□□ -2.07
TRL1YJL087C SKP2P42843 763 aa2.15□□□□□ -2.07
TRL1YJL087C FET5P43561 622 aa2.15□□□□□ -2.07
TRL1YJL087C CHA4P43634 648 aa2.15□□□□□ -2.07
TRL1YJL087C ZAP1P47043 880 aa2.15□□□□□ -2.07
TRL1YJL087C SNF12P53628 566 aa2.15□□□□□ -2.07
TRL1YJL087C TOF1P53840 1238 aa2.15□□□□□ -2.07
TRL1YJL087C RCM1P53972 490 aa2.15□□□□□ -2.07
TRL1YJL087C PRO2P54885 456 aaKnown RBP2.15□□□□□ -2.07
TRL1YJL087C ARX1Q03862 593 aaKnown RBP2.15□□□□□ -2.07
TRL1YJL087C RPC11Q04307 110 aaPredicted RBP2.15□□□□□ -2.07
TRL1YJL087C GYL1Q04322 720 aa2.15□□□□□ -2.07
TRL1YJL087C DPB4Q04603 196 aaKnown RBP2.15□□□□□ -2.07
TRL1YJL087C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
TRL1YJL087C RIX7Q07844 837 aaKnown RBP2.15□□□□□ -2.07
TRL1YJL087C NUS1Q12063 375 aa2.15□□□□□ -2.07
TRL1YJL087C GPM3Q12326 303 aa2.15□□□□□ -2.07
TRL1YJL087C YJR112W-AQ3E743 109 aa2.15□□□□□ -2.07
TRL1YJL087C YPT6Q99260 215 aa2.15□□□□□ -2.07
TRL1YJL087C AI3P03877 415 aa2.14□□□□□ -2.07
TRL1YJL087C DFR1P07807 211 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
TRL1YJL087C ERG20P08524 352 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C TUP1P16649 713 aa2.14□□□□□ -2.07
TRL1YJL087C VPS33P20795 691 aa2.14□□□□□ -2.07
TRL1YJL087C PRE8P23639 250 aa2.14□□□□□ -2.07
TRL1YJL087C PEX1P24004 1043 aa2.14□□□□□ -2.07
TRL1YJL087C URK1P27515 501 aa2.14□□□□□ -2.07
TRL1YJL087C GYP6P32806 458 aa2.14□□□□□ -2.07
TRL1YJL087C SIF2P38262 535 aa2.14□□□□□ -2.07
TRL1YJL087C VID24P38263 362 aa2.14□□□□□ -2.07
TRL1YJL087C FTH1P38310 465 aa2.14□□□□□ -2.07
TRL1YJL087C SLN1P39928 1220 aaPredicted RBP2.14□□□□□ -2.07
TRL1YJL087C GET2P40056 285 aa2.14□□□□□ -2.07
TRL1YJL087C LRO1P40345 661 aa2.14□□□□□ -2.07
TRL1YJL087C EFM4P40516 257 aa2.14□□□□□ -2.07
TRL1YJL087C SGN1P40561 250 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
TRL1YJL087C SSU1P41930 458 aa2.14□□□□□ -2.07
TRL1YJL087C MET12P46151 657 aa2.14□□□□□ -2.07
TRL1YJL087C ASE1P50275 885 aa2.14□□□□□ -2.07
TRL1YJL087C NCS6P53088 359 aa2.14□□□□□ -2.07
TRL1YJL087C OGG1P53397 376 aaPredicted RBP2.14□□□□□ -2.07
TRL1YJL087C TEX1P53851 422 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C EOS1P53938 366 aa2.14□□□□□ -2.07
TRL1YJL087C TIM11P81449 96 aaPredicted RBP2.14□□□□□ -2.07
TRL1YJL087C YPL108WQ02872 168 aaPredicted RBP2.14□□□□□ -2.07
TRL1YJL087C YAP6Q03935 383 aa2.14□□□□□ -2.07
TRL1YJL087C RSF1Q05043 376 aa2.14□□□□□ -2.07
TRL1YJL087C STP3Q05937 343 aa2.14□□□□□ -2.07
TRL1YJL087C TDA6Q06466 467 aa2.14□□□□□ -2.07
TRL1YJL087C THI22Q06490 572 aa2.14□□□□□ -2.07
TRL1YJL087C FMP45Q07651 309 aa2.14□□□□□ -2.07
TRL1YJL087C CDC45Q08032 650 aa2.14□□□□□ -2.07
TRL1YJL087C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
TRL1YJL087C RIM20Q12033 661 aa2.14□□□□□ -2.07
TRL1YJL087C PSY3Q12318 242 aa2.14□□□□□ -2.07
TRL1YJL087C CHS2P14180 963 aa2.14□□□□□ -2.07
TRL1YJL087C MDH1P17505 334 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
TRL1YJL087C CLB3P24870 427 aa2.14□□□□□ -2.07
TRL1YJL087C SPB1P25582 841 aaPredicted RBP2.14□□□□□ -2.07
TRL1YJL087C SYN8P31377 255 aa2.14□□□□□ -2.07
TRL1YJL087C KES1P35844 434 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C UBP11P36026 717 aa2.14□□□□□ -2.07
TRL1YJL087C APE3P37302 537 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C LSB3P43603 459 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C YGL036WP53185 909 aaPredicted RBP2.14□□□□□ -2.07
TRL1YJL087C MRPS35P53292 345 aa2.14□□□□□ -2.07
TRL1YJL087C SPO1P53541 631 aa2.14□□□□□ -2.07
TRL1YJL087C ERV25P54837 211 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C RPA49Q01080 415 aaPredicted RBP2.14□□□□□ -2.07
TRL1YJL087C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
TRL1YJL087C FDC1Q03034 503 aa2.14□□□□□ -2.07
TRL1YJL087C SOV1Q04748 898 aa2.14□□□□□ -2.07
TRL1YJL087C ROY1Q04847 553 aa2.14□□□□□ -2.07
TRL1YJL087C MRD1Q06106 887 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C RGC1Q06108 1083 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C YFT2Q06676 274 aa2.14□□□□□ -2.07
TRL1YJL087C AIM41Q12032 185 aa2.14□□□□□ -2.07
TRL1YJL087C RPN5Q12250 445 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C PNO1Q99216 274 aaKnown RBP2.14□□□□□ -2.07
TRL1YJL087C ECM3Q99252 613 aa2.14□□□□□ -2.07
TRL1YJL087C CTT1P06115 562 aa2.13□□□□□ -2.07
TRL1YJL087C RPC40P07703 335 aaKnown RBP2.13□□□□□ -2.07
TRL1YJL087C YML003WP0CF16 290 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms