RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	TEL2	P53038	688 aa		4.85	□□□□□ -1.63
SPR28	YDR218C	CUL3	P53202	744 aa		4.85	□□□□□ -1.63
SPR28	YDR218C	SPO1	P53541	631 aa		4.85	□□□□□ -1.63
SPR28	YDR218C	YLR345W	Q06137	509 aa		4.85	□□□□□ -1.63
SPR28	YDR218C	TFC6	Q06339	672 aa		4.85	□□□□□ -1.63
SPR28	YDR218C	MDY2	Q12285	212 aa		4.85	□□□□□ -1.63
SPR28	YDR218C	RRP36	Q12481	300 aa	Predicted RBP	4.85	□□□□□ -1.63
SPR28	YDR218C	Q0142	Q9ZZW4	58 aa		4.85	□□□□□ -1.63
SPR28	YDR218C	YRF1-4	O13559	1382 aa		4.85	□□□□□ -1.63
SPR28	YDR218C	CPA2	P03965	1118 aa	Known RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	CBS1	P14066	229 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	CDC26	P14724	124 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	PHO84	P25297	587 aa	Known RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	SED4	P25365	1065 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	RRP7	P25368	297 aa	Predicted RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	MSP1	P28737	362 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	RPD3	P32561	433 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	GYP6	P32806	458 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	FLC2	P39719	783 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	PFK26	P40433	827 aa	Known RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	CAB2	P40506	365 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	IST3	P40565	148 aa	Predicted RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	MRX6	P48564	524 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	DSD1	P53095	428 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	SQS1	P53866	767 aa	Known RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	RIA1	P53893	1110 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	ARP5	P53946	755 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	ATG21	Q02887	496 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	YML122C	Q03207	126 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	HOT1	Q03213	719 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	TMN2	Q04562	672 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	YLR407W	Q06070	228 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	LUC7	Q07508	261 aa	Predicted RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	CRD1	Q07560	283 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	KEL3	Q08979	651 aa	Predicted RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	RIM20	Q12033	661 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	TGL5	Q12043	749 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	GET3	Q12154	354 aa	Known RBP	4.84	□□□□□ -1.63
SPR28	YDR218C	COX17	Q12287	69 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	SKS1	Q12505	502 aa		4.84	□□□□□ -1.63
SPR28	YDR218C	ADE3	P07245	946 aa	Known RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	SUI3	P09064	285 aa	Known RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	FBP1	P09201	348 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	RPL19A	P0CX82	189 aa	Known RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	RPL19B	P0CX83	189 aa	Predicted RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	RRP43	P25359	394 aa	Predicted RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	NTG1	P31378	399 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	CTF13	P35203	478 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	UBP11	P36026	717 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	REG2	P38232	338 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	SSZ1	P38788	538 aa	Known RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	YIL161W	P40449	235 aa	Known RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	SKP2	P42843	763 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	BPL1	P48445	690 aa	Predicted RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	MDR1	P53258	950 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	ALF1	P53904	254 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	ERV25	P54837	211 aa	Known RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	YSA1	Q01976	231 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	MUK1	Q02866	612 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	RRN5	Q02983	363 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	YMR206W	Q03695	313 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	MGR3	Q04472	501 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	SPH1	Q06160	661 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	AAD4	Q07747	329 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	RTC5	Q12108	567 aa	Known RBP	4.83	□□□□□ -1.64
SPR28	YDR218C	YRM1	Q12340	786 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	YLR149C	Q99296	730 aa		4.83	□□□□□ -1.64
SPR28	YDR218C	LAT1	P12695	482 aa	Known RBP	4.82	□□□□□ -1.64
SPR28	YDR218C	OM45	P16547	393 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	SWI4	P25302	1093 aa	Known RBP	4.82	□□□□□ -1.64
SPR28	YDR218C	RAD51	P25454	400 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	PAP1	P29468	568 aa	Known RBP	4.82	□□□□□ -1.64
SPR28	YDR218C	SWC3	P31376	625 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	VPS17	P32913	551 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	TYE7	P33122	291 aa	Predicted RBP	4.82	□□□□□ -1.64
SPR28	YDR218C	DAD2	P36162	133 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	CCL1	P37366	393 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	GND1	P38720	489 aa	Known RBP	4.82	□□□□□ -1.64
SPR28	YDR218C	SMC2	P38989	1170 aa	Known RBP	4.82	□□□□□ -1.64
SPR28	YDR218C	BEM4	P39011	633 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	BUD16	P39988	312 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	MKT1	P40850	830 aa	Known RBP	4.82	□□□□□ -1.64
SPR28	YDR218C	SIP4	P46954	829 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	STB4	P50104	949 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	IMA1	P53051	589 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	TOF1	P53840	1238 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	YLR456W	Q06199	204 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	SKG3	Q06315	1026 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	PHO92	Q06390	306 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	RTK1	Q12100	620 aa	Predicted RBP	4.82	□□□□□ -1.64
SPR28	YDR218C	NMD4	Q12129	218 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	YOR022C	Q12204	715 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	ATG11	Q12527	1178 aa		4.82	□□□□□ -1.64
SPR28	YDR218C	HNM1	P19807	563 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
SPR28	YDR218C	MF(ALPHA)2	P32435	120 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	GCD7	P32502	381 aa	Predicted RBP	4.81	□□□□□ -1.64
SPR28	YDR218C	SIF2	P38262	535 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	YHR033W	P38690	423 aa		4.81	□□□□□ -1.64
SPR28	YDR218C	OTU2	P38747	307 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms