RNA–Protein interactions for RNA: YDR198C

RKM2, Transcript of Ribosomal protein lysine methyltransferase, yeast

Gene RKM2, Length 1,440 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM2	YDR198C	SEC53	P07283	254 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	SWI6	P09959	803 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	MSS116	P15424	664 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	MSP1	P28737	362 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	SUR1	P33300	382 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	MRPL40	P36534	297 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	SIF2	P38262	535 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	COS111	P38308	924 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	RPN10	P38886	268 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	GPB2	P39717	880 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	LTP1	P40347	161 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	YIL092W	P40497	633 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RKM2	YDR198C	NOP9	P47077	666 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	SGF73	P53165	657 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	BSC5	P53755	489 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	VBA4	Q04602	768 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	COQ4	O13525	335 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	CYC1	P00044	109 aa	Predicted RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	CPA2	P03965	1118 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	TPK1	P06244	397 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	PRP22	P24384	1145 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	DBP2	P24783	546 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	YEL043W	P32618	956 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	DAD2	P36162	133 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	THI6	P41835	540 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	MET12	P46151	657 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	CTF18	P49956	741 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	VPS4	P52917	437 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	SNF12	P53628	566 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	REX2	P54964	269 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	TOF2	Q02208	771 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	GCN5	Q03330	439 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	ROT1	Q03691	256 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	NHX1	Q04121	633 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	ERB1	Q04660	807 aa	Known RBP	4.89	□□□□□ -1.63
RKM2	YDR198C	YDR338C	Q05497	695 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	YLR456W	Q06199	204 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	TRM8	Q12009	286 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	HFI1	Q12060	488 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	HAL9	Q12180	1030 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	YPL066W	Q12194	479 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	HER1	Q12276	1246 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	APM4	Q99186	491 aa		4.89	□□□□□ -1.63
RKM2	YDR198C	SSK22	P25390	1331 aa	Predicted RBP	4.88	□□□□□ -1.63
RKM2	YDR198C	PDR5	P33302	1511 aa	Known RBP	4.88	□□□□□ -1.63
RKM2	YDR198C	DED1	P06634	604 aa	Known RBP	4.88	□□□□□ -1.63
RKM2	YDR198C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RKM2	YDR198C	DBP5	P20449	482 aa	Known RBP	4.88	□□□□□ -1.63
RKM2	YDR198C	PWP1	P21304	576 aa	Known RBP	4.88	□□□□□ -1.63
RKM2	YDR198C	CLB4	P24871	460 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	OCA4	P25366	362 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	DMC1	P25453	334 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	HMX1	P32339	317 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	KRE6	P32486	720 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	TGL1	P34163	548 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	GCS1	P35197	352 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	ADD66	P36040	267 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	YRO2	P38079	344 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	PCH2	P38126	564 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	TAF5	P38129	798 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	DUN1	P39009	513 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	PUG1	P40100	303 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	PKP1	P40530	394 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	CUL3	P53202	744 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	CPR6	P53691	371 aa	Known RBP	4.88	□□□□□ -1.63
RKM2	YDR198C	EGD1	Q02642	157 aa	Known RBP	4.88	□□□□□ -1.63
RKM2	YDR198C	ATP25	Q03153	612 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	YAP6	Q03935	383 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	YDR514C	Q04408	483 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	OMS1	Q06668	471 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	LUC7	Q07508	261 aa	Predicted RBP	4.88	□□□□□ -1.63
RKM2	YDR198C	TGL5	Q12043	749 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	PDR11	P40550	1411 aa		4.88	□□□□□ -1.63
RKM2	YDR198C	PHO5	P00635	467 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	GAL7	P08431	366 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	RPS21A	P0C0V8	87 aa	Known RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	NCP1	P16603	691 aa	Known RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	CLB1	P24868	471 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	HSP104	P31539	908 aa	Known RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	STB6	P36085	766 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	SPO22	P40511	975 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	PRM2	P40534	656 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	INA22	P40576	216 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	GCN20	P43535	752 aa	Known RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	STU2	P46675	888 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	YJR039W	P47107	1121 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	HNT2	P49775	206 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	PAN2	P53010	1115 aa	Predicted RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	TAD1	P53065	400 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	MLC1	P53141	149 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	YBP2	P53169	641 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	YGR054W	P53235	642 aa	Known RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	YGR283C	P53336	341 aa	Predicted RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	RRB1	Q04225	511 aa	Known RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	SNO4	Q04902	237 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	DUS3	Q06053	668 aa	Known RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	EST2	Q06163	884 aa		4.87	□□□□□ -1.63
RKM2	YDR198C	HSP33	Q08914	237 aa	Known RBP	4.87	□□□□□ -1.63
RKM2	YDR198C	HSP32	Q08992	237 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms