RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 FlnaQ8BTM8 2647 aaKnown RBP6.8□□□□□ -1.32
Col6a4-201ENSMUST00000121963 Smr3aQ61900 147 aa6.8□□□□□ -1.32
Col6a4-201ENSMUST00000121963 Usp34Q6ZQ93 3582 aa6.8□□□□□ -1.32
Col6a4-201ENSMUST00000121963 Gm5767A0A0J9YTU8 78 aa6.79□□□□□ -1.32
Col6a4-201ENSMUST00000121963 Zfhx3Q61329 3726 aa6.79□□□□□ -1.32
Col6a4-201ENSMUST00000121963 Lelp1Q9DAE3 120 aa6.78□□□□□ -1.32
Col6a4-201ENSMUST00000121963 Krtap16-1A2A5X5 502 aa6.77□□□□□ -1.33
Col6a4-201ENSMUST00000121963 6030445D17RikE9Q8F9 148 aa6.76□□□□□ -1.33
Col6a4-201ENSMUST00000121963 Smim29Q8R043 75 aa6.75□□□□□ -1.33
Col6a4-201ENSMUST00000121963 Bod1lE9Q6J5 3032 aa6.74□□□□□ -1.33
Col6a4-201ENSMUST00000121963 Gm9507D3Z5T3 223 aa6.72□□□□□ -1.33
Col6a4-201ENSMUST00000121963 TrioQ0KL02 3102 aa6.69□□□□□ -1.34
Col6a4-201ENSMUST00000121963 Cep350E9Q309 3095 aa6.68□□□□□ -1.34
Col6a4-201ENSMUST00000121963 Phxr4P15974 95 aa6.68□□□□□ -1.34
Col6a4-201ENSMUST00000121963 Tnp2P11378 117 aa6.67□□□□□ -1.34
Col6a4-201ENSMUST00000121963 Eif4ebp3Q80VV3 101 aa6.67□□□□□ -1.34
Col6a4-201ENSMUST00000121963 CenpfE9Q3P4 2997 aaKnown RBP6.67□□□□□ -1.34
Col6a4-201ENSMUST00000121963 9530053A07RikE9PVG8 2581 aa6.66□□□□□ -1.34
Col6a4-201ENSMUST00000121963 Tep1P97499 2629 aa6.66□□□□□ -1.34
Col6a4-201ENSMUST00000121963 Odf3bQ5M8M2 238 aa6.66□□□□□ -1.34
Col6a4-201ENSMUST00000121963 Prrc2cQ3TLH4 2846 aaKnown RBP6.65□□□□□ -1.35
Col6a4-201ENSMUST00000121963 Krtap13O88375 197 aa6.64□□□□□ -1.35
Col6a4-201ENSMUST00000121963 Chd6A3KFM7 2711 aa6.64□□□□□ -1.35
Col6a4-201ENSMUST00000121963 Gm11565A2A4M7 156 aa6.64□□□□□ -1.35
Col6a4-201ENSMUST00000121963 Gcn1E9PVA8 2671 aaKnown RBP6.6□□□□□ -1.35
Col6a4-201ENSMUST00000121963 Krtap10-4Q08EG8 221 aa6.6□□□□□ -1.35
Col6a4-201ENSMUST00000121963 Gm10643Q3URG9 111 aa6.6□□□□□ -1.35
Col6a4-201ENSMUST00000121963 Krtap29-1A2A5X4 342 aa6.59□□□□□ -1.35
Col6a4-201ENSMUST00000121963 Gm9195A0A140LHT4 2805 aa6.59□□□□□ -1.35
Col6a4-201ENSMUST00000121963 BC029722A0A0N4SW31 51 aa6.59□□□□□ -1.36
Col6a4-201ENSMUST00000121963 Gm7173A0A0G2JEB6 3132 aa6.58□□□□□ -1.36
Col6a4-201ENSMUST00000121963 Prr13Q9CQJ5 137 aa6.56□□□□□ -1.36
Col6a4-201ENSMUST00000121963 Itpr1P11881 2749 aa6.56□□□□□ -1.36
Col6a4-201ENSMUST00000121963 Gm10139O88245 57 aa6.54□□□□□ -1.36
Col6a4-201ENSMUST00000121963 Lama2Q60675 3118 aaKnown RBP6.53□□□□□ -1.36
Col6a4-201ENSMUST00000121963 2310050C09RikG5E8Z3 280 aa6.53□□□□□ -1.36
Col6a4-201ENSMUST00000121963 Map1aQ9QYR6 2776 aa6.53□□□□□ -1.36
Col6a4-201ENSMUST00000121963 Rev3lQ61493 3122 aa6.53□□□□□ -1.36
Col6a4-201ENSMUST00000121963 Krtap10-10A0A1W2P7T6 217 aa6.52□□□□□ -1.37
Col6a4-201ENSMUST00000121963 Mki67E9PVX6 3177 aaKnown RBP6.52□□□□□ -1.37
Col6a4-201ENSMUST00000121963 Szt2A2A9C3 3431 aa6.51□□□□□ -1.37
Col6a4-201ENSMUST00000121963 HttP42859 3119 aa6.5□□□□□ -1.37
Col6a4-201ENSMUST00000121963 Cdh23Q99PF4 3354 aa6.5□□□□□ -1.37
Col6a4-201ENSMUST00000121963 Nbeal2Q6ZQA0 2742 aa6.5□□□□□ -1.37
Col6a4-201ENSMUST00000121963 Ubr5Q80TP3 2792 aa6.48□□□□□ -1.37
Col6a4-201ENSMUST00000121963 Sprr1aQ62266 144 aa6.47□□□□□ -1.37
Col6a4-201ENSMUST00000121963 MgaA2AWL7 3003 aaKnown RBP6.47□□□□□ -1.37
Col6a4-201ENSMUST00000121963 Stab2Q8R4U0 2559 aa6.47□□□□□ -1.37
Col6a4-201ENSMUST00000121963 Ranbp2Q9ERU9 3053 aaKnown RBP6.46□□□□□ -1.38
Col6a4-201ENSMUST00000121963 Col12a1Q60847 3120 aa6.44□□□□□ -1.38
Col6a4-201ENSMUST00000121963 Col6a5A6H584 2640 aa6.44□□□□□ -1.38
Col6a4-201ENSMUST00000121963 Celsr3Q91ZI0 3301 aa6.43□□□□□ -1.38
Col6a4-201ENSMUST00000121963 Gm16253D3Z167 63 aa6.43□□□□□ -1.38
Col6a4-201ENSMUST00000121963 NipblQ6KCD5 2798 aaKnown RBP6.42□□□□□ -1.38
Col6a4-201ENSMUST00000121963 Fam229bQ8CF36 80 aa6.41□□□□□ -1.38
Col6a4-201ENSMUST00000121963 Cfap54Q8C6S9 3106 aa6.41□□□□□ -1.38
Col6a4-201ENSMUST00000121963 Unc80Q8BLN6 3261 aa6.39□□□□□ -1.39
Col6a4-201ENSMUST00000121963 Pkd1l1Q8R526 2615 aa6.39□□□□□ -1.39
Col6a4-201ENSMUST00000121963 KalrnA2CG49 2964 aa6.39□□□□□ -1.39
Col6a4-201ENSMUST00000121963 Gm37013Q8K491 104 aa6.38□□□□□ -1.39
Col6a4-201ENSMUST00000121963 2310057N15RikQ9D6T8 200 aa6.38□□□□□ -1.39
Col6a4-201ENSMUST00000121963 Gm2696A0A1W2P709 240 aa6.37□□□□□ -1.39
Col6a4-201ENSMUST00000121963 Rpl37Q9D823 97 aa6.36□□□□□ -1.39
Col6a4-201ENSMUST00000121963 Dmxl1Q6PNC0 3013 aa6.35□□□□□ -1.39
Col6a4-201ENSMUST00000121963 AtmQ62388 3066 aa6.34□□□□□ -1.4
Col6a4-201ENSMUST00000121963 BptfA2A654 3036 aaKnown RBP6.32□□□□□ -1.4
Col6a4-201ENSMUST00000121963 Romo1P60603 79 aa6.32□□□□□ -1.4
Col6a4-201ENSMUST00000121963 Gm10382Q3V0T5 144 aa6.3□□□□□ -1.4
Col6a4-201ENSMUST00000121963 Krtap14O08640 167 aa6.29□□□□□ -1.4
Col6a4-201ENSMUST00000121963 Gm2310J3QNJ2 377 aa6.27□□□□□ -1.41
Col6a4-201ENSMUST00000121963 Frem2Q6NVD0 3160 aa6.26□□□□□ -1.41
Col6a4-201ENSMUST00000121963 A930033H14RikG5E8X6 103 aa6.25□□□□□ -1.41
Col6a4-201ENSMUST00000121963 Dmxl2Q8BPN8 3032 aa6.24□□□□□ -1.41
Col6a4-201ENSMUST00000121963 Itpr2Q9Z329 2701 aa6.24□□□□□ -1.41
Col6a4-201ENSMUST00000121963 Rps29P62274 56 aa6.23□□□□□ -1.41
Col6a4-201ENSMUST00000121963 FryE9Q8I9 3020 aa6.23□□□□□ -1.41
Col6a4-201ENSMUST00000121963 Fbn2Q61555 2907 aa6.21□□□□□ -1.41
Col6a4-201ENSMUST00000121963 FlncQ8VHX6 2726 aaKnown RBP6.21□□□□□ -1.42
Col6a4-201ENSMUST00000121963 AspmQ8CJ27 3122 aa6.2□□□□□ -1.42
Col6a4-201ENSMUST00000121963 Myo15aQ9QZZ4 3511 aa6.2□□□□□ -1.42
Col6a4-201ENSMUST00000121963 Wdfy4E9Q2M9 3149 aa6.2□□□□□ -1.42
Col6a4-201ENSMUST00000121963 Gm21887J3QQ04 176 aa6.19□□□□□ -1.42
Col6a4-201ENSMUST00000121963 Gm5965D3Z724 196 aa6.18□□□□□ -1.42
Col6a4-201ENSMUST00000121963 Igfn1Q3KNY0 2849 aa6.17□□□□□ -1.42
Col6a4-201ENSMUST00000121963 Vps13aQ5H8C4 3166 aa6.17□□□□□ -1.42
Col6a4-201ENSMUST00000121963 Col6a3E9PWQ3 3284 aa6.16□□□□□ -1.42
Col6a4-201ENSMUST00000121963 Myo15bI7HPW8 3033 aa6.15□□□□□ -1.42
Col6a4-201ENSMUST00000121963 2310061N02RikQ9D6S9 174 aa6.15□□□□□ -1.42
Col6a4-201ENSMUST00000121963 D6Ertd527eA0A0N4SWI3 464 aa6.15□□□□□ -1.43
Col6a4-201ENSMUST00000121963 Celsr1O35161 3034 aa6.15□□□□□ -1.43
Col6a4-201ENSMUST00000121963 Tnrc18Q80WC3 2878 aa6.13□□□□□ -1.43
Col6a4-201ENSMUST00000121963 Chd9Q8BYH8 2885 aa6.13□□□□□ -1.43
Col6a4-201ENSMUST00000121963 VcanQ62059 3357 aa6.12□□□□□ -1.43
Col6a4-201ENSMUST00000121963 Lama1P19137 3084 aa6.11□□□□□ -1.43
Col6a4-201ENSMUST00000121963 Tex15F8VPN2 2785 aa6.1□□□□□ -1.43
Col6a4-201ENSMUST00000121963 ApcQ61315 2845 aa6.09□□□□□ -1.43
Col6a4-201ENSMUST00000121963 FcgbpE9Q0B5 2583 aa6.08□□□□□ -1.44
Col6a4-201ENSMUST00000121963 Trank1Q8BV79 2999 aa6.08□□□□□ -1.44
Col6a4-201ENSMUST00000121963 Lrrc37aB1AWG4 3215 aa6.07□□□□□ -1.44
Col6a4-201ENSMUST00000121963 Utp20Q5XG71 2788 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms